Cow genome map
| Conread name: | rpigcb_10277.y1 |
| Conread position: | 5-306 |
| Cow position: | chr17:22551792-22551490 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 5, 236 |
| Conread position: | 5-384 |
| Cow position: | chr17:22553052-22552672 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 5, 236 |
| Conread position: | 6-243 |
| Cow position: | chr17:22589460-22589223 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-381 |
| Cow position: | chr17:22552546-22552171 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 75 |
| Conread position: | 8-381 |
| Cow position: | chr17:22552963-22552591 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 8-381 |
| Cow position: | chr17:22590298-22589925 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 178 |
| Conread position: | 11-305 |
| Cow position: | chr17:22498832-22498538 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-382 |
| Cow position: | chr17:22452154-22451782 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 366, 0 |
| Conread position: | 11-384 |
| Cow position: | chr17:22552709-22552336 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 85 |
| Conread position: | 16-381 |
| Cow position: | chr17:22452233-22451868 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-381 |
| Cow position: | chr17:22473566-22473932 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 233, 254 |
| Conread position: | 16-381 |
| Cow position: | chr17:22552284-22551919 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 16-381 |
| Cow position: | chr17:22589870-22589505 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-383 |
| Cow position: | chr17:22473314-22473681 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 72 |
| Conread position: | 16-384 |
| Cow position: | chr17:22589702-22589334 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 17-369 |
| Cow position: | chr17:22499246-22498894 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 147, 155 |
| Conread position: | 17-376 |
| Cow position: | chr17:22452064-22451705 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 332 |
| Conread position: | 17-379 |
| Cow position: | chr17:22551863-22551501 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 64 |
| Conread position: | 17-381 |
| Cow position: | chr17:22452316-22451952 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 17-381 |
| Cow position: | chr17:22473483-22473847 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-381 |
| Cow position: | chr17:22498910-22498546 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-381 |
| Cow position: | chr17:22498994-22498630 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-381 |
| Cow position: | chr17:22499078-22498714 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 144, 155 |
| Conread position: | 17-381 |
| Cow position: | chr17:22552451-22552087 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 17-381 |
| Cow position: | chr17:22552619-22552255 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 60, 71 |
| Conread position: | 17-381 |
| Cow position: | chr17:22552871-22552507 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 323 |
| Conread position: | 17-381 |
| Cow position: | chr17:22590121-22589757 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 17-381 |
| Cow position: | chr17:22590205-22589841 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 85, 63 |
| Conread position: | 17-382 |
| Cow position: | chr17:22552787-22552422 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 63 |
| Conread position: | 17-383 |
| Cow position: | chr17:22499330-22498964 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 17-383 |
| Cow position: | chr17:22552199-22551833 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 240, 217 |
| Conread position: | 17-383 |
| Cow position: | chr17:22552367-22552001 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 17-383 |
| Cow position: | chr17:22589953-22589587 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 223 |
| Conread position: | 17-383 |
| Cow position: | chr17:22590037-22589671 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-384 |
| Cow position: | chr17:22452400-22452033 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-384 |
| Cow position: | chr17:22551947-22551580 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 60, 71 |
| Conread position: | 17-384 |
| Cow position: | chr17:22552115-22551748 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 61 |
| Conread position: | 18-381 |
| Cow position: | chr17:22553122-22552759 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 109, 114 |
| Conread position: | 23-381 |
| Cow position: | chr17:22589779-22589421 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 158, 163 |
| Conread position: | 29-327 |
| Cow position: | chr17:22589521-22589223 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 232, 220 |
| Conread position: | 29-381 |
| Cow position: | chr17:22473411-22473763 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 303, 311 |
| Conread position: | 32-380 |
| Cow position: | chr17:22473249-22473594 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 14 |
| Conread position: | 38-383 |
| Cow position: | chr17:22473174-22473513 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 117-381 |
| Cow position: | chr17:22499398-22499134 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 133-383 |
| Cow position: | chr17:22590257-22590007 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 39 |
Show alignments to all cow chromosomes.