Cow genome map
Conread name: | rpigcb_10277.y1 |
Conread position: | 6-381 |
Cow position: | chr19:14940379-14940754 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 160 |
Conread position: | 6-383 |
Cow position: | chr19:14940547-14940924 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-383 |
Cow position: | chr19:14940631-14941008 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 161 |
Conread position: | 8-381 |
Cow position: | chr19:23596837-23597207 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 229 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 208, 195 |
Conread position: | 8-381 |
Cow position: | chr19:23613658-23614030 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 7 |
Conread position: | 8-381 |
Cow position: | chr19:23614666-23615038 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 8-383 |
Cow position: | chr19:43570167-43569792 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 239 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-386 |
Cow position: | chr19:23596922-23597296 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 323, 9 |
Conread position: | 8-386 |
Cow position: | chr19:23649864-23650241 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 9 |
Conread position: | 9-313 |
Cow position: | chr19:14959595-14959292 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 204 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 287, 0 |
Conread position: | 11-296 |
Cow position: | chr19:14959104-14958819 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 186 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-326 |
Cow position: | chr19:14948323-14948008 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 208 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-371 |
Cow position: | chr19:14940048-14940408 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-380 |
Cow position: | chr19:14959675-14959308 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 246 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 242, 24 |
Conread position: | 11-381 |
Cow position: | chr19:14940216-14940586 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-381 |
Cow position: | chr19:23649950-23650320 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 243 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 320, 329 |
Conread position: | 12-297 |
Cow position: | chr19:23597426-23597711 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 197 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 86, 71 |
Conread position: | 12-380 |
Cow position: | chr19:14960080-14959714 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 232 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 81, 68 |
Conread position: | 12-384 |
Cow position: | chr19:23649783-23650155 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 160 |
Conread position: | 13-369 |
Cow position: | chr19:43569994-43569642 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 233 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 168, 174 |
Conread position: | 13-381 |
Cow position: | chr19:23650036-23650404 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-379 |
Cow position: | chr19:23650121-23650486 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 236 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-381 |
Cow position: | chr19:23613495-23613862 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 256 |
Conread position: | 14-381 |
Cow position: | chr19:43570245-43569879 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 66 |
Conread position: | 14-384 |
Cow position: | chr19:43570077-43569709 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 344, 0 |
Conread position: | 14-386 |
Cow position: | chr19:23597176-23597548 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 248 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 80, 65 |
Conread position: | 14-386 |
Cow position: | chr19:23613411-23613783 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 244 |
Conread position: | 15-383 |
Cow position: | chr19:20677511-20677879 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 236 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 16-228 |
Cow position: | chr19:20635232-20635020 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 145 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 16-377 |
Cow position: | chr19:23614589-23614950 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 70 |
Conread position: | 16-381 |
Cow position: | chr19:14940137-14940502 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 320 |
Conread position: | 16-381 |
Cow position: | chr19:23614001-23614366 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 170 |
Conread position: | 16-384 |
Cow position: | chr19:23613581-23613949 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 163 |
Conread position: | 17-231 |
Cow position: | chr19:14940810-14941024 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 150 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-328 |
Cow position: | chr19:14916029-14916336 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 198 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 53, 67 |
Conread position: | 17-366 |
Cow position: | chr19:23614758-23615107 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 234 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 133, 155 |
Conread position: | 17-372 |
Cow position: | chr19:14959176-14958827 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 239 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 239, 66 |
Conread position: | 17-378 |
Cow position: | chr19:20635399-20635038 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-378 |
Cow position: | chr19:23649536-23649897 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 239 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 84, 75 |
Conread position: | 17-378 |
Cow position: | chr19:23649620-23649981 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 63 |
Conread position: | 17-381 |
Cow position: | chr19:14960409-14960047 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 241 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 258, 0 |
Conread position: | 17-381 |
Cow position: | chr19:20677597-20677961 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 155 |
Conread position: | 17-381 |
Cow position: | chr19:23597095-23597459 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 155 |
Conread position: | 17-381 |
Cow position: | chr19:23597347-23597711 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 230 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-381 |
Cow position: | chr19:23613750-23614114 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 167 |
Conread position: | 17-381 |
Cow position: | chr19:23614170-23614534 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 240 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 164, 169 |
Conread position: | 17-381 |
Cow position: | chr19:23614254-23614618 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-381 |
Cow position: | chr19:23614422-23614786 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 241 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 329, 316 |
Conread position: | 17-381 |
Cow position: | chr19:23649452-23649816 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 244 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 84, 75 |
Conread position: | 17-381 |
Cow position: | chr19:23649704-23650068 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 244 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 132, 139 |
Conread position: | 17-382 |
Cow position: | chr19:14940474-14940839 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 165 |
Conread position: | 17-383 |
Cow position: | chr19:14948401-14948035 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 241 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 289, 284 |
Conread position: | 17-383 |
Cow position: | chr19:20635483-20635117 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 172 |
Conread position: | 17-383 |
Cow position: | chr19:23613834-23614200 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-383 |
Cow position: | chr19:23613918-23614284 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 319 |
Conread position: | 17-384 |
Cow position: | chr19:23614338-23614705 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 229, 223 |
Conread position: | 17-386 |
Cow position: | chr19:14948484-14948116 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 241 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 17-386 |
Cow position: | chr19:14960241-14959874 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 324, 63 |
Conread position: | 17-386 |
Cow position: | chr19:23597263-23597632 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 323 |
Conread position: | 17-386 |
Cow position: | chr19:23614086-23614455 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 152 |
Conread position: | 17-386 |
Cow position: | chr19:23614506-23614875 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 168 |
Conread position: | 20-384 |
Cow position: | chr19:14959257-14958898 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 235 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 361, 138 |
Conread position: | 21-330 |
Cow position: | chr19:14940730-14941039 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 205 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-381 |
Cow position: | chr19:14960154-14959797 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 214 |
Conread position: | 22-381 |
Cow position: | chr19:20678442-20678798 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 232 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 164, 151 |
Conread position: | 22-383 |
Cow position: | chr19:20678022-20678383 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 246 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 55, 78 |
Conread position: | 23-301 |
Cow position: | chr19:20678527-20678802 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 185 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 163, 150 |
Conread position: | 23-381 |
Cow position: | chr19:20677687-20678045 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 226, 243 |
Conread position: | 25-379 |
Cow position: | chr19:20635560-20635205 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 29-328 |
Cow position: | chr19:20678365-20678664 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 50 |
Conread position: | 29-381 |
Cow position: | chr19:20677441-20677793 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 232 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 134, 157 |
Conread position: | 29-383 |
Cow position: | chr19:20635639-20635285 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 236 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 217, 211 |
Conread position: | 29-383 |
Cow position: | chr19:20677945-20678299 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 237 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 72, 55 |
Conread position: | 29-384 |
Cow position: | chr19:20678197-20678552 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 143 |
Conread position: | 30-386 |
Cow position: | chr19:23649297-23649653 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 237 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 52, 70 |
Conread position: | 35-381 |
Cow position: | chr19:14939988-14940334 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 199 |
Conread position: | 35-381 |
Cow position: | chr19:20678287-20678633 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 237 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 147, 128 |
Conread position: | 38-381 |
Cow position: | chr19:20678122-20678465 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 134 |
Conread position: | 38-381 |
Cow position: | chr19:23613351-23613694 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 225 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 208, 196 |
Conread position: | 38-386 |
Cow position: | chr19:23649389-23649737 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 227 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 42, 53 |
Conread position: | 41-330 |
Cow position: | chr19:14915967-14916256 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 192 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 37, 161 |
Conread position: | 52-384 |
Cow position: | chr19:43570287-43569960 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 227 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 34, 10 |
Conread position: | 53-381 |
Cow position: | chr19:20635699-20635371 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 211 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 26, 40 |
Conread position: | 55-381 |
Cow position: | chr19:14959306-14958986 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 204 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 185, 0 |
Conread position: | 59-383 |
Cow position: | chr19:14959711-14959389 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 213 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 200, 60 |
Conread position: | 84-386 |
Cow position: | chr19:23649269-23649569 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 189 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 98, 15 |
Conread position: | 146-382 |
Cow position: | chr19:14960448-14960212 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 164 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 108, 94 |
Show alignments to all cow chromosomes.