Cow genome map

Conread name: rpigcb_10277.y1

Conread position: 6-381
Cow position:
Alignm length: 377
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 160

Conread position: 6-383
Cow position:
Alignm length: 378
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-383
Cow position:
Alignm length: 379
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 161

Conread position: 8-381
Cow position:
Alignm length: 375
Alignm identity: 229
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 208, 195

Conread position: 8-381
Cow position:
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 7

Conread position: 8-381
Cow position:
Alignm length: 374
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 8-383
Cow position:
Alignm length: 376
Alignm identity: 239
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 8-386
Cow position:
Alignm length: 380
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 9

Conread position: 8-386
Cow position:
Alignm length: 382
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 9

Conread position: 9-313
Cow position:
Alignm length: 305
Alignm identity: 204
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 287, 0

Conread position: 11-296
Cow position:
Alignm length: 286
Alignm identity: 186
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 11-326
Cow position:
Alignm length: 316
Alignm identity: 208
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 11-371
Cow position:
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-380
Cow position:
Alignm length: 373
Alignm identity: 246
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 242, 24

Conread position: 11-381
Cow position:
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-381
Cow position:
Alignm length: 372
Alignm identity: 243
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 320, 329

Conread position: 12-297
Cow position:
Alignm length: 288
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 86, 71

Conread position: 12-380
Cow position:
Alignm length: 371
Alignm identity: 232
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 68

Conread position: 12-384
Cow position:
Alignm length: 374
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 160

Conread position: 13-369
Cow position:
Alignm length: 359
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 168, 174

Conread position: 13-381
Cow position:
Alignm length: 369
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-379
Cow position:
Alignm length: 366
Alignm identity: 236
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 14-381
Cow position:
Alignm length: 369
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 256

Conread position: 14-381
Cow position:
Alignm length: 370
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 66

Conread position: 14-384
Cow position:
Alignm length: 371
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 0

Conread position: 14-386
Cow position:
Alignm length: 375
Alignm identity: 248
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 80, 65

Conread position: 14-386
Cow position:
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 244

Conread position: 15-383
Cow position:
Alignm length: 369
Alignm identity: 236
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 16-228
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 16-377
Cow position:
Alignm length: 364
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 70

Conread position: 16-381
Cow position:
Alignm length: 367
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 320

Conread position: 16-381
Cow position:
Alignm length: 368
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 170

Conread position: 16-384
Cow position:
Alignm length: 371
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 163

Conread position: 17-231
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 17-328
Cow position:
Alignm length: 314
Alignm identity: 198
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 67

Conread position: 17-366
Cow position:
Alignm length: 351
Alignm identity: 234
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 133, 155

Conread position: 17-372
Cow position:
Alignm length: 359
Alignm identity: 239
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 239, 66

Conread position: 17-378
Cow position:
Alignm length: 362
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-378
Cow position:
Alignm length: 363
Alignm identity: 239
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 84, 75

Conread position: 17-378
Cow position:
Alignm length: 366
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 63

Conread position: 17-381
Cow position:
Alignm length: 365
Alignm identity: 241
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 258, 0

Conread position: 17-381
Cow position:
Alignm length: 366
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 155

Conread position: 17-381
Cow position:
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 155

Conread position: 17-381
Cow position:
Alignm length: 365
Alignm identity: 230
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 17-381
Cow position:
Alignm length: 366
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 167

Conread position: 17-381
Cow position:
Alignm length: 366
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 164, 169

Conread position: 17-381
Cow position:
Alignm length: 365
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-381
Cow position:
Alignm length: 366
Alignm identity: 241
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 329, 316

Conread position: 17-381
Cow position:
Alignm length: 368
Alignm identity: 244
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 84, 75

Conread position: 17-381
Cow position:
Alignm length: 367
Alignm identity: 244
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 132, 139

Conread position: 17-382
Cow position:
Alignm length: 367
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 165

Conread position: 17-383
Cow position:
Alignm length: 369
Alignm identity: 241
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 289, 284

Conread position: 17-383
Cow position:
Alignm length: 368
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 172

Conread position: 17-383
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-383
Cow position:
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 319

Conread position: 17-384
Cow position:
Alignm length: 369
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 223

Conread position: 17-386
Cow position:
Alignm length: 370
Alignm identity: 241
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 84, 0

Conread position: 17-386
Cow position:
Alignm length: 372
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 63

Conread position: 17-386
Cow position:
Alignm length: 371
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 323

Conread position: 17-386
Cow position:
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 152

Conread position: 17-386
Cow position:
Alignm length: 371
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 168

Conread position: 20-384
Cow position:
Alignm length: 366
Alignm identity: 235
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 361, 138

Conread position: 21-330
Cow position:
Alignm length: 310
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 22-381
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 214

Conread position: 22-381
Cow position:
Alignm length: 361
Alignm identity: 232
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 164, 151

Conread position: 22-383
Cow position:
Alignm length: 367
Alignm identity: 246
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 55, 78

Conread position: 23-301
Cow position:
Alignm length: 280
Alignm identity: 185
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 163, 150

Conread position: 23-381
Cow position:
Alignm length: 361
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 243

Conread position: 25-379
Cow position:
Alignm length: 356
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 29-328
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 50

Conread position: 29-381
Cow position:
Alignm length: 354
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 134, 157

Conread position: 29-383
Cow position:
Alignm length: 357
Alignm identity: 236
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 217, 211

Conread position: 29-383
Cow position:
Alignm length: 358
Alignm identity: 237
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 72, 55

Conread position: 29-384
Cow position:
Alignm length: 359
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 143

Conread position: 30-386
Cow position:
Alignm length: 362
Alignm identity: 237
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 52, 70

Conread position: 35-381
Cow position:
Alignm length: 348
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 199

Conread position: 35-381
Cow position:
Alignm length: 350
Alignm identity: 237
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 147, 128

Conread position: 38-381
Cow position:
Alignm length: 345
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 134

Conread position: 38-381
Cow position:
Alignm length: 345
Alignm identity: 225
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 208, 196

Conread position: 38-386
Cow position:
Alignm length: 354
Alignm identity: 227
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 42, 53

Conread position: 41-330
Cow position:
Alignm length: 292
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 161

Conread position: 52-384
Cow position:
Alignm length: 335
Alignm identity: 227
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 34, 10

Conread position: 53-381
Cow position:
Alignm length: 332
Alignm identity: 211
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 40

Conread position: 55-381
Cow position:
Alignm length: 327
Alignm identity: 204
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 185, 0

Conread position: 59-383
Cow position:
Alignm length: 327
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 200, 60

Conread position: 84-386
Cow position:
Alignm length: 304
Alignm identity: 189
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 98, 15

Conread position: 146-382
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 94

Show alignments to all cow chromosomes.