Cow genome map
| Conread name: | rpigcb_10277.y1 |
| Conread position: | 5-328 |
| Cow position: | chr2:86465570-86465893 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 76, 88 |
| Conread position: | 6-381 |
| Cow position: | chr2:78755805-78756181 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 240, 308 |
| Conread position: | 8-383 |
| Cow position: | chr2:5874959-5874584 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-383 |
| Cow position: | chr2:82799498-82799872 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 8 |
| Conread position: | 9-381 |
| Cow position: | chr2:86465070-86465442 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 179, 183 |
| Conread position: | 9-386 |
| Cow position: | chr2:48689485-48689109 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 78 |
| Conread position: | 11-381 |
| Cow position: | chr2:82799668-82800038 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-381 |
| Cow position: | chr2:82799752-82800122 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 325 |
| Conread position: | 11-383 |
| Cow position: | chr2:5874872-5874500 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 175, 171 |
| Conread position: | 11-386 |
| Cow position: | chr2:82799584-82799959 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 161 |
| Conread position: | 12-385 |
| Cow position: | chr2:5875123-5874750 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 74 |
| Conread position: | 14-371 |
| Cow position: | chr2:82800091-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 135, 144 |
| Conread position: | 14-376 |
| Cow position: | chr2:86464991-86465353 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 255, 223 |
| Conread position: | 14-381 |
| Cow position: | chr2:82799839-82800206 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 74 |
| Conread position: | 16-384 |
| Cow position: | chr2:86465833-86466202 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 76 |
| Conread position: | 17-355 |
| Cow position: | chr2:78754492-78754826 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 17-379 |
| Cow position: | chr2:78755316-78755674 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 17-380 |
| Cow position: | chr2:78755232-78755593 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 17-380 |
| Cow position: | chr2:78755984-78756346 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 84, 130 |
| Conread position: | 17-381 |
| Cow position: | chr2:5874530-5874166 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 17-381 |
| Cow position: | chr2:78754660-78755008 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 17-381 |
| Cow position: | chr2:78754896-78755260 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-383 |
| Cow position: | chr2:78755650-78756014 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 258, 11 |
| Conread position: | 17-383 |
| Cow position: | chr2:82800010-82800376 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 75 |
| Conread position: | 18-381 |
| Cow position: | chr2:78754243-78754604 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 240, 197 |
| Conread position: | 18-383 |
| Cow position: | chr2:78755065-78755429 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 327, 272 |
| Conread position: | 19-328 |
| Cow position: | chr2:78755734-78756043 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 172, 163 |
| Conread position: | 19-381 |
| Cow position: | chr2:78754982-78755343 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 324 |
| Conread position: | 22-328 |
| Cow position: | chr2:86465335-86465641 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 241, 255 |
| Conread position: | 22-381 |
| Cow position: | chr2:86465167-86465526 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 58 |
| Conread position: | 22-382 |
| Cow position: | chr2:78754331-78754689 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 331, 111 |
| Conread position: | 25-386 |
| Cow position: | chr2:48689553-48689193 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 27-381 |
| Cow position: | chr2:82799936-82800290 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 28-381 |
| Cow position: | chr2:86465761-86466114 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 68, 74 |
| Conread position: | 28-382 |
| Cow position: | chr2:78755159-78755512 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 158 |
| Conread position: | 29-376 |
| Cow position: | chr2:5874686-5874339 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 42, 58 |
| Conread position: | 29-378 |
| Cow position: | chr2:78755411-78755757 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 244, 102 |
| Conread position: | 29-381 |
| Cow position: | chr2:78754824-78755176 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 234 |
| Conread position: | 33-384 |
| Cow position: | chr2:5874766-5874415 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 153, 149 |
| Conread position: | 38-379 |
| Cow position: | chr2:86465267-86465608 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 122, 136 |
| Conread position: | 62-381 |
| Cow position: | chr2:82799467-82799786 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 261, 278 |
| Conread position: | 100-379 |
| Cow position: | chr2:78754811-78755090 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-382 |
| Cow position: | chr2:82799467-82799703 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.