Cow genome map

Conread name: rpigcb_10277.y1

Conread position: 4-213
Cow position: chr28:33210446-33210656 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 116, 0

Conread position: 9-386
Cow position: chr28:34695883-34696260 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 240
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 103, 74

Conread position: 11-243
Cow position: chr28:33210369-33210602 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 77

Conread position: 12-331
Cow position: chr28:33210286-33210606 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 219
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 57, 96

Conread position: 13-384
Cow position: chr28:9252994-9253365 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 9

Conread position: 14-291
Cow position: chr28:9299281-9299558 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 14-381
Cow position: chr28:7757392-7757759 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 226

Conread position: 14-381
Cow position: chr28:7757896-7758263 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 81

Conread position: 14-381
Cow position: chr28:7758148-7758499 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 214
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 54, 66

Conread position: 14-386
Cow position: chr28:9253079-9253451 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 227

Conread position: 15-231
Cow position: chr28:9290479-9290695 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-322
Cow position: chr28:9298879-9299183 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 63

Conread position: 16-368
Cow position: chr28:7757982-7758334 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 16-370
Cow position: chr28:11333823-11333469 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 231
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 135, 156

Conread position: 16-382
Cow position: chr28:7758470-7758835 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 156

Conread position: 16-384
Cow position: chr28:9290150-9290512 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 248
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 324, 58

Conread position: 17-217
Cow position: chr28:9253418-9253618 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 71

Conread position: 17-310
Cow position: chr28:7810252-7810536 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 17-368
Cow position: chr28:34696227-34696578 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 168, 162

Conread position: 17-378
Cow position: chr28:9290067-9290423 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 41, 56

Conread position: 17-381
Cow position: chr28:7757563-7757927 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 235, 224

Conread position: 17-381
Cow position: chr28:7757815-7758179 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-381
Cow position: chr28:7810411-7810766 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 63

Conread position: 17-381
Cow position: chr28:7810570-7810934 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 236
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 244, 217

Conread position: 17-381
Cow position: chr28:9252913-9253278 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 17-381
Cow position: chr28:9253166-9253530 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 57

Conread position: 17-381
Cow position: chr28:9290315-9290677 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 155, 60

Conread position: 17-381
Cow position: chr28:11333906-11333542 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 85, 66

Conread position: 17-381
Cow position: chr28:34673502-34673866 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 227
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 83, 62

Conread position: 17-381
Cow position: chr28:34696143-34696507 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 230
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 71

Conread position: 17-382
Cow position: chr28:9253250-9253615 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 320, 315

Conread position: 17-382
Cow position: chr28:9298631-9298993 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 34

Conread position: 17-383
Cow position: chr28:7757647-7758013 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 224

Conread position: 17-383
Cow position: chr28:7758387-7758753 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 63

Conread position: 17-383
Cow position: chr28:9289819-9290181 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 234
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 253, 63

Conread position: 17-384
Cow position: chr28:7757479-7757846 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 71

Conread position: 17-384
Cow position: chr28:7757731-7758098 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 224

Conread position: 17-384
Cow position: chr28:9299046-9299399 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 244, 138

Conread position: 18-383
Cow position: chr28:34695724-34696089 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 229
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 63

Conread position: 18-386
Cow position: chr28:11334073-11333705 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 232
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 84

Conread position: 19-309
Cow position: chr28:7810656-7810946 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 65

Conread position: 19-315
Cow position: chr28:9290400-9290695 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 61, 0

Conread position: 27-381
Cow position: chr28:34696069-34696423 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 220
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 146, 136

Conread position: 35-380
Cow position: chr28:9299218-9299563 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 223
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 35-381
Cow position: chr28:34679561-34679214 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 227
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 16

Conread position: 38-381
Cow position: chr28:7758324-7758667 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 203
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 283, 302

Conread position: 38-381
Cow position: chr28:33210228-33210572 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 219
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 40

Conread position: 40-381
Cow position: chr28:7757334-7757675 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 45-381
Cow position: chr28:34673362-34673698 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 211
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 277, 296

Conread position: 105-330
Cow position: chr28:34679575-34679354 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 118-383
Cow position: chr28:9299217-9299482 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 152, 122

Conread position: 123-381
Cow position: chr28:34673356-34673614 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 209, 216

Conread position: 141-381
Cow position: chr28:7810283-7810523 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 104, 108

Show alignments to all cow chromosomes.