Cow genome map
Conread name: | rpigcb_10277.y1 |
Conread position: | 4-213 |
Cow position: | chr28:33210446-33210656 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 140 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 9-386 |
Cow position: | chr28:34695883-34696260 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 240 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 103, 74 |
Conread position: | 11-243 |
Cow position: | chr28:33210369-33210602 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 159 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 57, 77 |
Conread position: | 12-331 |
Cow position: | chr28:33210286-33210606 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 219 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 57, 96 |
Conread position: | 13-384 |
Cow position: | chr28:9252994-9253365 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 9 |
Conread position: | 14-291 |
Cow position: | chr28:9299281-9299558 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 185 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-381 |
Cow position: | chr28:7757392-7757759 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 226 |
Conread position: | 14-381 |
Cow position: | chr28:7757896-7758263 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 81 |
Conread position: | 14-381 |
Cow position: | chr28:7758148-7758499 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 214 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 54, 66 |
Conread position: | 14-386 |
Cow position: | chr28:9253079-9253451 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 227 |
Conread position: | 15-231 |
Cow position: | chr28:9290479-9290695 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 142 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 16-322 |
Cow position: | chr28:9298879-9299183 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 198 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 72, 63 |
Conread position: | 16-368 |
Cow position: | chr28:7757982-7758334 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 16-370 |
Cow position: | chr28:11333823-11333469 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 231 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 135, 156 |
Conread position: | 16-382 |
Cow position: | chr28:7758470-7758835 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 156 |
Conread position: | 16-384 |
Cow position: | chr28:9290150-9290512 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 248 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 324, 58 |
Conread position: | 17-217 |
Cow position: | chr28:9253418-9253618 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 138 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 52, 71 |
Conread position: | 17-310 |
Cow position: | chr28:7810252-7810536 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 201 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 17-368 |
Cow position: | chr28:34696227-34696578 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 221 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 168, 162 |
Conread position: | 17-378 |
Cow position: | chr28:9290067-9290423 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 241 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 41, 56 |
Conread position: | 17-381 |
Cow position: | chr28:7757563-7757927 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 238 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 235, 224 |
Conread position: | 17-381 |
Cow position: | chr28:7757815-7758179 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-381 |
Cow position: | chr28:7810411-7810766 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 63 |
Conread position: | 17-381 |
Cow position: | chr28:7810570-7810934 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 236 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 244, 217 |
Conread position: | 17-381 |
Cow position: | chr28:9252913-9253278 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 17-381 |
Cow position: | chr28:9253166-9253530 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 57 |
Conread position: | 17-381 |
Cow position: | chr28:9290315-9290677 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 239 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 155, 60 |
Conread position: | 17-381 |
Cow position: | chr28:11333906-11333542 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 234 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 85, 66 |
Conread position: | 17-381 |
Cow position: | chr28:34673502-34673866 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 227 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 83, 62 |
Conread position: | 17-381 |
Cow position: | chr28:34696143-34696507 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 230 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 54, 71 |
Conread position: | 17-382 |
Cow position: | chr28:9253250-9253615 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 315 |
Conread position: | 17-382 |
Cow position: | chr28:9298631-9298993 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 250 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 84, 34 |
Conread position: | 17-383 |
Cow position: | chr28:7757647-7758013 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 224 |
Conread position: | 17-383 |
Cow position: | chr28:7758387-7758753 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 63 |
Conread position: | 17-383 |
Cow position: | chr28:9289819-9290181 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 234 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 253, 63 |
Conread position: | 17-384 |
Cow position: | chr28:7757479-7757846 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 71 |
Conread position: | 17-384 |
Cow position: | chr28:7757731-7758098 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 224 |
Conread position: | 17-384 |
Cow position: | chr28:9299046-9299399 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 247 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 244, 138 |
Conread position: | 18-383 |
Cow position: | chr28:34695724-34696089 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 229 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 88, 63 |
Conread position: | 18-386 |
Cow position: | chr28:11334073-11333705 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 232 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 53, 84 |
Conread position: | 19-309 |
Cow position: | chr28:7810656-7810946 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 200 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 58, 65 |
Conread position: | 19-315 |
Cow position: | chr28:9290400-9290695 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 199 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 27-381 |
Cow position: | chr28:34696069-34696423 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 220 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 146, 136 |
Conread position: | 35-380 |
Cow position: | chr28:9299218-9299563 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 223 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 35-381 |
Cow position: | chr28:34679561-34679214 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 227 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 51, 16 |
Conread position: | 38-381 |
Cow position: | chr28:7758324-7758667 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 203 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 283, 302 |
Conread position: | 38-381 |
Cow position: | chr28:33210228-33210572 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 219 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 33, 40 |
Conread position: | 40-381 |
Cow position: | chr28:7757334-7757675 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 228 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 45-381 |
Cow position: | chr28:34673362-34673698 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 211 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 277, 296 |
Conread position: | 105-330 |
Cow position: | chr28:34679575-34679354 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 149 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 118-383 |
Cow position: | chr28:9299217-9299482 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 182 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 152, 122 |
Conread position: | 123-381 |
Cow position: | chr28:34673356-34673614 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 179 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 209, 216 |
Conread position: | 141-381 |
Cow position: | chr28:7810283-7810523 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 168 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 104, 108 |
Show alignments to all cow chromosomes.