Cow genome map
| Conread name: | rpigcb_10277.y1 |
| Conread position: | 8-330 |
| Cow position: | chr3:62742249-62742570 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 8-330 |
| Cow position: | chr3:68045824-68046145 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 88, 7 |
| Conread position: | 8-375 |
| Cow position: | chr3:68027147-68027513 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 166, 9 |
| Conread position: | 8-381 |
| Cow position: | chr3:62722102-62721730 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 9 |
| Conread position: | 8-383 |
| Cow position: | chr3:68045907-68046282 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 323, 328 |
| Conread position: | 8-384 |
| Cow position: | chr3:68026978-68027354 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 65, 83 |
| Conread position: | 8-386 |
| Cow position: | chr3:62742333-62742707 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 22 |
| Conread position: | 9-299 |
| Cow position: | chr3:68046076-68046364 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 249, 261 |
| Conread position: | 9-306 |
| Cow position: | chr3:68027483-68027779 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 249, 261 |
| Conread position: | 9-379 |
| Cow position: | chr3:62721934-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 154 |
| Conread position: | 11-378 |
| Cow position: | chr3:62743070-62743432 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 11-381 |
| Cow position: | chr3:62742587-62742953 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 88, 54 |
| Conread position: | 11-381 |
| Cow position: | chr3:68027317-68027687 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 320, 325 |
| Conread position: | 11-382 |
| Cow position: | chr3:62742668-62743033 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 139, 69 |
| Conread position: | 14-362 |
| Cow position: | chr3:77350936-77350591 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 72, 86 |
| Conread position: | 14-383 |
| Cow position: | chr3:62742922-62743269 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 14-383 |
| Cow position: | chr3:68027236-68027605 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 79, 65 |
| Conread position: | 14-383 |
| Cow position: | chr3:68027404-68027771 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 342, 0 |
| Conread position: | 14-386 |
| Cow position: | chr3:62722013-62721641 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 66 |
| Conread position: | 17-330 |
| Cow position: | chr3:62743155-62743468 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 76, 63 |
| Conread position: | 17-381 |
| Cow position: | chr3:62722178-62721814 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 315 |
| Conread position: | 17-381 |
| Cow position: | chr3:77351094-77350737 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 17-386 |
| Cow position: | chr3:68045748-68046117 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 319 |
| Conread position: | 22-381 |
| Cow position: | chr3:62722257-62721898 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-381 |
| Cow position: | chr3:68027076-68027435 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 329, 308 |
| Conread position: | 22-381 |
| Cow position: | chr3:68045669-68046028 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 141, 150 |
| Conread position: | 30-384 |
| Cow position: | chr3:68045593-68045947 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-328 |
| Cow position: | chr3:16020456-16020177 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 125, 45 |
| Conread position: | 40-386 |
| Cow position: | chr3:62722323-62721977 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 59-380 |
| Cow position: | chr3:62743034-62743350 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 131-386 |
| Cow position: | chr3:68045610-68045865 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 131, 103 |
| Conread position: | 195-386 |
| Cow position: | chr3:16020467-16020283 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.