Cow genome map
| Conread name: | rpigcb_10277.y1 |
| Conread position: | 11-381 |
| Cow position: | chr6:49396023-49396384 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 14-244 |
| Cow position: | chr6:49341220-49341448 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 220, 0 |
| Conread position: | 16-381 |
| Cow position: | chr6:49340634-49340999 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 242, 218 |
| Conread position: | 16-381 |
| Cow position: | chr6:49341054-49341419 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 91 |
| Conread position: | 16-386 |
| Cow position: | chr6:49428542-49428912 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 170, 163 |
| Conread position: | 17-307 |
| Cow position: | chr6:49396356-49396646 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 54, 58 |
| Conread position: | 17-321 |
| Cow position: | chr6:49396692-49396996 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 76, 62 |
| Conread position: | 17-332 |
| Cow position: | chr6:49341139-49341453 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 229, 223 |
| Conread position: | 17-379 |
| Cow position: | chr6:49396608-49396970 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 161, 168 |
| Conread position: | 17-381 |
| Cow position: | chr6:49340467-49340831 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 236, 248 |
| Conread position: | 17-381 |
| Cow position: | chr6:49340803-49341167 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 169 |
| Conread position: | 17-381 |
| Cow position: | chr6:49340887-49341251 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-381 |
| Cow position: | chr6:49396194-49396552 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 146, 33 |
| Conread position: | 17-384 |
| Cow position: | chr6:49340551-49340918 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 17-384 |
| Cow position: | chr6:49340971-49341338 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-384 |
| Cow position: | chr6:49428795-49429162 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 305, 284 |
| Conread position: | 17-386 |
| Cow position: | chr6:49396524-49396893 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 163, 169 |
| Conread position: | 17-386 |
| Cow position: | chr6:49428291-49428660 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 71 |
| Conread position: | 17-386 |
| Cow position: | chr6:49428963-49429332 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 162, 169 |
| Conread position: | 21-330 |
| Cow position: | chr6:49362490-49362787 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 80, 58 |
| Conread position: | 38-381 |
| Cow position: | chr6:49340404-49340747 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-383 |
| Cow position: | chr6:49340380-49340665 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 84, 88 |
| Conread position: | 190-386 |
| Cow position: | chr6:49340388-49340584 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.