Cow genome map

Conread name: rpigcb_10277.y1

Conread position: 4-381
Cow position:
Alignm length: 379
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 13

Conread position: 7-328
Cow position:
Alignm length: 325
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 174, 10

Conread position: 8-172
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 8-380
Cow position:
Alignm length: 376
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 9

Conread position: 8-383
Cow position:
Alignm length: 379
Alignm identity: 236
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 156, 183

Conread position: 8-384
Cow position:
Alignm length: 377
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 8-386
Cow position:
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 7

Conread position: 9-384
Cow position:
Alignm length: 377
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 334, 322

Conread position: 11-259
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 168, 175

Conread position: 11-341
Cow position:
Alignm length: 338
Alignm identity: 227
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 84, 68

Conread position: 11-381
Cow position:
Alignm length: 372
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 229

Conread position: 11-381
Cow position:
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 236

Conread position: 11-381
Cow position:
Alignm length: 373
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 174

Conread position: 11-386
Cow position:
Alignm length: 376
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 13-379
Cow position:
Alignm length: 369
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 221

Conread position: 14-252
Cow position:
Alignm length: 239
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 14-383
Cow position:
Alignm length: 371
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 220

Conread position: 15-330
Cow position:
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 230

Conread position: 16-366
Cow position:
Alignm length: 351
Alignm identity: 231
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 16-381
Cow position:
Alignm length: 366
Alignm identity: 234
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 16-381
Cow position:
Alignm length: 366
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 16-383
Cow position:
Alignm length: 374
Alignm identity: 241
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 145, 71

Conread position: 17-289
Cow position:
Alignm length: 280
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 62

Conread position: 17-327
Cow position:
Alignm length: 315
Alignm identity: 207
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 165, 146

Conread position: 17-327
Cow position:
Alignm length: 313
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 165, 181

Conread position: 17-327
Cow position:
Alignm length: 313
Alignm identity: 201
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 165, 147

Conread position: 17-327
Cow position:
Alignm length: 314
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 146

Conread position: 17-330
Cow position:
Alignm length: 316
Alignm identity: 209
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 159, 147

Conread position: 17-334
Cow position:
Alignm length: 323
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 46

Conread position: 17-366
Cow position:
Alignm length: 351
Alignm identity: 231
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 226, 219

Conread position: 17-381
Cow position:
Alignm length: 366
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 169

Conread position: 17-381
Cow position:
Alignm length: 366
Alignm identity: 241
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 244, 224

Conread position: 17-381
Cow position:
Alignm length: 367
Alignm identity: 227
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 135, 154

Conread position: 17-381
Cow position:
Alignm length: 369
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 60, 71

Conread position: 17-381
Cow position:
Alignm length: 367
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 316

Conread position: 17-381
Cow position:
Alignm length: 371
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 63

Conread position: 17-381
Cow position:
Alignm length: 369
Alignm identity: 227
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 157, 145

Conread position: 17-381
Cow position:
Alignm length: 369
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 84, 70

Conread position: 17-381
Cow position:
Alignm length: 369
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 169

Conread position: 17-381
Cow position:
Alignm length: 371
Alignm identity: 253
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 84, 68

Conread position: 17-381
Cow position:
Alignm length: 365
Alignm identity: 238
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 17-381
Cow position:
Alignm length: 366
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 308

Conread position: 17-381
Cow position:
Alignm length: 365
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-381
Cow position:
Alignm length: 365
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-382
Cow position:
Alignm length: 368
Alignm identity: 236
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 67, 14

Conread position: 17-383
Cow position:
Alignm length: 368
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 131, 101

Conread position: 17-383
Cow position:
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-383
Cow position:
Alignm length: 369
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 223

Conread position: 17-383
Cow position:
Alignm length: 370
Alignm identity: 234
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 174, 146

Conread position: 17-383
Cow position:
Alignm length: 369
Alignm identity: 233
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 252, 235

Conread position: 17-383
Cow position:
Alignm length: 371
Alignm identity: 243
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 253, 240

Conread position: 17-383
Cow position:
Alignm length: 370
Alignm identity: 244
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 165, 146

Conread position: 17-383
Cow position:
Alignm length: 368
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 76

Conread position: 17-384
Cow position:
Alignm length: 369
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 323

Conread position: 17-386
Cow position:
Alignm length: 374
Alignm identity: 249
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 161, 153

Conread position: 17-386
Cow position:
Alignm length: 372
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 223

Conread position: 18-383
Cow position:
Alignm length: 367
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 327

Conread position: 19-379
Cow position:
Alignm length: 369
Alignm identity: 243
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 160, 136

Conread position: 19-381
Cow position:
Alignm length: 364
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 251

Conread position: 21-381
Cow position:
Alignm length: 362
Alignm identity: 229
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 309, 319

Conread position: 22-380
Cow position:
Alignm length: 363
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 72

Conread position: 23-381
Cow position:
Alignm length: 362
Alignm identity: 242
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 84

Conread position: 23-383
Cow position:
Alignm length: 365
Alignm identity: 234
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 162, 140

Conread position: 24-379
Cow position:
Alignm length: 360
Alignm identity: 232
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 154, 139

Conread position: 25-381
Cow position:
Alignm length: 362
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 5, 69

Conread position: 26-386
Cow position:
Alignm length: 361
Alignm identity: 222
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 137, 0

Conread position: 29-325
Cow position:
Alignm length: 297
Alignm identity: 181
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 29-383
Cow position:
Alignm length: 360
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 58

Conread position: 31-345
Cow position:
Alignm length: 316
Alignm identity: 195
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 53

Conread position: 32-332
Cow position:
Alignm length: 301
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 35-378
Cow position:
Alignm length: 344
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 38-383
Cow position:
Alignm length: 348
Alignm identity: 227
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 147, 133

Conread position: 40-330
Cow position:
Alignm length: 296
Alignm identity: 193
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 39

Conread position: 41-383
Cow position:
Alignm length: 349
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 59

Conread position: 53-383
Cow position:
Alignm length: 333
Alignm identity: 217
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 99, 133

Conread position: 99-381
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 99-381
Cow position:
Alignm length: 285
Alignm identity: 191
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 18

Conread position: 101-327
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 70

Conread position: 101-386
Cow position:
Alignm length: 287
Alignm identity: 182
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 160, 148

Conread position: 124-383
Cow position:
Alignm length: 263
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 39

Show alignments to all cow chromosomes.