Cow genome map
| Conread name: | rpigcb_10277.y1 |
| Conread position: | 8-381 |
| Cow position: | chr8:48407576-48407203 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-383 |
| Cow position: | chr8:46816184-46816558 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 8-383 |
| Cow position: | chr8:46816688-46817062 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 9 |
| Conread position: | 9-370 |
| Cow position: | chr8:55581381-55581742 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-245 |
| Cow position: | chr8:46817110-46817344 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 11-381 |
| Cow position: | chr8:45200991-45201361 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 332, 322 |
| Conread position: | 11-381 |
| Cow position: | chr8:48406817-48406447 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 56, 73 |
| Conread position: | 11-383 |
| Cow position: | chr8:48407069-48406697 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 153, 172 |
| Conread position: | 11-383 |
| Cow position: | chr8:55581131-55581503 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-379 |
| Cow position: | chr8:48406646-48406281 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 138, 159 |
| Conread position: | 15-381 |
| Cow position: | chr8:55580883-55581249 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 64 |
| Conread position: | 16-327 |
| Cow position: | chr8:46816611-46816922 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 162, 170 |
| Conread position: | 16-375 |
| Cow position: | chr8:46817031-46817390 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 236 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 229, 236 |
| Conread position: | 16-381 |
| Cow position: | chr8:46816107-46816472 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 168 |
| Conread position: | 16-381 |
| Cow position: | chr8:46816275-46816640 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 55 |
| Conread position: | 17-330 |
| Cow position: | chr8:45201585-45201898 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 229, 223 |
| Conread position: | 17-331 |
| Cow position: | chr8:45201669-45201983 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 239, 217 |
| Conread position: | 17-372 |
| Cow position: | chr8:55581305-55581660 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 336, 316 |
| Conread position: | 17-381 |
| Cow position: | chr8:45201081-45201445 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 62 |
| Conread position: | 17-381 |
| Cow position: | chr8:45201165-45201529 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 220 |
| Conread position: | 17-381 |
| Cow position: | chr8:45201249-45201613 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 68 |
| Conread position: | 17-381 |
| Cow position: | chr8:45201333-45201697 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 323 |
| Conread position: | 17-381 |
| Cow position: | chr8:45201417-45201781 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-381 |
| Cow position: | chr8:46816528-46816892 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-381 |
| Cow position: | chr8:46816780-46817144 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 169 |
| Conread position: | 17-381 |
| Cow position: | chr8:48406979-48406615 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-381 |
| Cow position: | chr8:48407231-48406867 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 324 |
| Conread position: | 17-381 |
| Cow position: | chr8:48407483-48407119 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 17-381 |
| Cow position: | chr8:55581221-55581585 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 330, 336 |
| Conread position: | 17-383 |
| Cow position: | chr8:6958017-6957652 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 302, 233 |
| Conread position: | 17-383 |
| Cow position: | chr8:46816360-46816726 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 62 |
| Conread position: | 17-383 |
| Cow position: | chr8:46816948-46817314 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-383 |
| Cow position: | chr8:48407147-48406781 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 252 |
| Conread position: | 17-383 |
| Cow position: | chr8:48407315-48406949 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 151 |
| Conread position: | 17-384 |
| Cow position: | chr8:48407399-48407032 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 76 |
| Conread position: | 17-386 |
| Cow position: | chr8:45201501-45201870 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 17-386 |
| Cow position: | chr8:46816444-46816813 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 247 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 249, 220 |
| Conread position: | 17-386 |
| Cow position: | chr8:46816864-46817233 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 93, 62 |
| Conread position: | 17-386 |
| Cow position: | chr8:55581053-55581422 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 245, 253 |
| Conread position: | 29-381 |
| Cow position: | chr8:46816036-46816388 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 272 |
| Conread position: | 29-381 |
| Cow position: | chr8:55580981-55581333 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 234 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-381 |
| Cow position: | chr8:48407635-48407287 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 119, 135 |
| Conread position: | 34-386 |
| Cow position: | chr8:46815957-46816309 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 129, 138 |
| Conread position: | 38-381 |
| Cow position: | chr8:55580737-55581081 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 40 |
| Conread position: | 38-383 |
| Cow position: | chr8:48406706-48406361 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 48, 42 |
| Conread position: | 40-384 |
| Cow position: | chr8:45200936-45201280 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 206, 200 |
| Conread position: | 58-386 |
| Cow position: | chr8:6958060-6957733 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 192, 211 |
| Conread position: | 60-386 |
| Cow position: | chr8:55580844-55581170 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 181 |
Show alignments to all cow chromosomes.