Cow genome map


           Conread name:
           rpigcb_10554.y1
        

               Conread position:
               2-396
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 339
               

               Conread position:
               2-470
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 80
               

               Conread position:
               5-397
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               28, 92
               

               Conread position:
               5-443
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               5-458
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               282
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               5-459
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 73
               

               Conread position:
               5-462
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               5-467
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               5-470
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               5-470
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 92
               

               Conread position:
               5-470
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               273
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               28, 302
               

               Conread position:
               5-470
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 21
               

               Conread position:
               5-470
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               296
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               28, 92
               

               Conread position:
               7-470
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 82
               

               Conread position:
               7-470
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               26, 241
               

               Conread position:
               7-470
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               26, 48
               

               Conread position:
               13-470
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 160
               

               Conread position:
               13-470
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 294
               

               Conread position:
               13-470
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               13-470
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               14-470
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               283
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               14-470
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               19, 404
               

               Conread position:
               14-470
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 404
               

               Conread position:
               21-397
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               57, 48
               

               Conread position:
               32-396
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               32-470
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 54
               

               Conread position:
               33-437
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               34-456
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               34-470
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               34-470
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               292, 286
               

               Conread position:
               37-470
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 57
               

               Conread position:
               42-470
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               107, 112
               

               Conread position:
               52-444
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 35
               

               Conread position:
               52-470
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               20, 170
               

               Conread position:
               58-470
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               67-470
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               109, 116
               

               Conread position:
               71-470
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               344, 351
               

               Conread position:
               71-470
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               350, 344
               

               Conread position:
               71-470
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               115, 121
               

               Conread position:
               73-469
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               343, 349
               

               Conread position:
               76-470
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               257, 262
               

               Conread position:
               76-470
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               254
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               77-470
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               8, 257
               

               Conread position:
               78-470
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               255, 7
               

               Conread position:
               81-470
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               83-458
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 87
               

               Conread position:
               84-470
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               254, 248
               

               Conread position:
               85-404
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               75, 85
               

               Conread position:
               85-450
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               332, 337
               

               Conread position:
               85-456
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               95, 89
               

               Conread position:
               85-458
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               252, 247
               

               Conread position:
               85-460
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               228, 240
               

               Conread position:
               85-468
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               138, 148
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               248, 253
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               68, 53
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               244, 225
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               75, 85
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               322, 316
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               327, 315
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               280, 338
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               357, 0
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               158, 148
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               111, 121
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               337, 330
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               251
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 85
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               85-470
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 9
               

               Conread position:
               91-470
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               96-470
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               240
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-470
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               52, 39
               

               Conread position:
               96-470
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               311, 323
               

               Conread position:
               96-470
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               326, 302
               

               Conread position:
               97-396
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               226, 216
               

               Conread position:
               97-470
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               302, 325
               

               Conread position:
               97-470
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-470
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               158, 145
               

               Conread position:
               97-470
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-470
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-470
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               176, 171
               

               Conread position:
               101-470
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               59, 69
               

               Conread position:
               106-470
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               315, 309
               

               Conread position:
               169-470
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-470
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               250-470
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               10, 0
               
Show alignments to all cow chromosomes.