Cow genome map
| Conread name: | rpigcb_10554.y1 |
| Conread position: | 5-468 |
| Cow position: | chr17:22552114-22551648 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 35, 137 |
| Conread position: | 7-458 |
| Cow position: | chr17:22551944-22551490 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 7-470 |
| Cow position: | chr17:22552196-22551730 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 303 |
| Conread position: | 22-470 |
| Cow position: | chr17:22473252-22473700 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 34-470 |
| Cow position: | chr17:22552922-22552486 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 141, 105 |
| Conread position: | 37-470 |
| Cow position: | chr17:22590253-22589820 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 52-468 |
| Cow position: | chr17:22552233-22551816 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 52-470 |
| Cow position: | chr17:22452182-22451763 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 20, 357 |
| Conread position: | 53-470 |
| Cow position: | chr17:22473450-22473868 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 53-470 |
| Cow position: | chr17:22552652-22552234 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 57-470 |
| Cow position: | chr17:22552731-22552318 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 98, 91 |
| Conread position: | 64-470 |
| Cow position: | chr17:22551968-22551562 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 86, 57 |
| Conread position: | 84-461 |
| Cow position: | chr17:22498995-22498618 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 231, 220 |
| Conread position: | 85-458 |
| Cow position: | chr17:22589869-22589496 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-460 |
| Cow position: | chr17:22552283-22551908 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-468 |
| Cow position: | chr17:22552955-22552572 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 328, 314 |
| Conread position: | 85-470 |
| Cow position: | chr17:22452064-22451679 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 276, 283 |
| Conread position: | 85-470 |
| Cow position: | chr17:22452232-22451847 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 144, 134 |
| Conread position: | 85-470 |
| Cow position: | chr17:22452316-22451931 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-470 |
| Cow position: | chr17:22452400-22452015 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 148, 135 |
| Conread position: | 85-470 |
| Cow position: | chr17:22499162-22498777 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-470 |
| Cow position: | chr17:22499330-22498945 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-470 |
| Cow position: | chr17:22552451-22552066 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 230, 219 |
| Conread position: | 85-470 |
| Cow position: | chr17:22552535-22552150 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-470 |
| Cow position: | chr17:22589953-22589568 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 231, 222 |
| Conread position: | 127-470 |
| Cow position: | chr17:41441100-41440757 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 289, 295 |
| Conread position: | 168-470 |
| Cow position: | chr17:22499331-22499029 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-470 |
| Cow position: | chr17:22552956-22552654 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-470 |
| Cow position: | chr17:22553107-22552822 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-470 |
| Cow position: | chr17:22499365-22499113 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 277-470 |
| Cow position: | chr17:41441118-41440925 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.