Cow genome map
| Conread name: | rpigcb_10554.y1 |
| Conread position: | 1-470 |
| Cow position: | chr19:14940219-14940691 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 32, 172 |
| Conread position: | 5-463 |
| Cow position: | chr19:23649873-23650334 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 5-467 |
| Cow position: | chr19:14940559-14941024 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-468 |
| Cow position: | chr19:23597096-23597562 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 5-469 |
| Cow position: | chr19:14960324-14959859 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 175 |
| Conread position: | 5-470 |
| Cow position: | chr19:14940307-14940775 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 60 |
| Conread position: | 5-470 |
| Cow position: | chr19:14960240-14959776 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 33, 67 |
| Conread position: | 5-470 |
| Cow position: | chr19:23613835-23614303 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 5-470 |
| Cow position: | chr19:23614339-23614807 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 294 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 5-470 |
| Cow position: | chr19:23614507-23614975 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 5-470 |
| Cow position: | chr19:23649453-23649921 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 336 |
| Conread position: | 5-470 |
| Cow position: | chr19:23649789-23650257 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 137 |
| Conread position: | 7-401 |
| Cow position: | chr19:23649539-23649936 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 32-470 |
| Cow position: | chr19:23596877-23597312 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 32-470 |
| Cow position: | chr19:23597210-23597648 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-469 |
| Cow position: | chr19:14940510-14940942 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 38-404 |
| Cow position: | chr19:23650075-23650443 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 39-470 |
| Cow position: | chr19:14960455-14960026 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 302, 0 |
| Conread position: | 52-452 |
| Cow position: | chr19:23650006-23650407 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 52-470 |
| Cow position: | chr19:23613716-23614135 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 52-470 |
| Cow position: | chr19:23613800-23614219 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 364 |
| Conread position: | 53-470 |
| Cow position: | chr19:20635516-20635098 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 53-470 |
| Cow position: | chr19:23614473-23614891 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 57-470 |
| Cow position: | chr19:14940026-14940439 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 71-470 |
| Cow position: | chr19:14940208-14940607 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 74-397 |
| Cow position: | chr19:43570252-43569930 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 201, 11 |
| Conread position: | 80-456 |
| Cow position: | chr19:23597342-23597718 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 80, 90 |
| Conread position: | 80-470 |
| Cow position: | chr19:23597090-23597480 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 342 |
| Conread position: | 82-469 |
| Cow position: | chr19:14948404-14948017 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-329 |
| Cow position: | chr19:14940810-14941054 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-458 |
| Cow position: | chr19:43570074-43569703 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 340, 0 |
| Conread position: | 85-467 |
| Cow position: | chr19:14940474-14940856 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-467 |
| Cow position: | chr19:23649452-23649834 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 330, 337 |
| Conread position: | 85-469 |
| Cow position: | chr19:23614170-23614554 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 314, 322 |
| Conread position: | 85-470 |
| Cow position: | chr19:23613414-23613799 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-470 |
| Cow position: | chr19:23613498-23613883 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 82, 53 |
| Conread position: | 85-470 |
| Cow position: | chr19:23614086-23614471 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 230, 219 |
| Conread position: | 85-470 |
| Cow position: | chr19:23614674-23615059 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 313, 337 |
| Conread position: | 85-470 |
| Cow position: | chr19:43570158-43569773 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 84 |
| Conread position: | 88-470 |
| Cow position: | chr19:14959257-14958881 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 91-395 |
| Cow position: | chr19:20678359-20678663 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 79, 61 |
| Conread position: | 91-434 |
| Cow position: | chr19:14940732-14941075 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-469 |
| Cow position: | chr19:23614008-23614386 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-470 |
| Cow position: | chr19:14940144-14940523 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 109 |
| Conread position: | 91-470 |
| Cow position: | chr19:20678275-20678654 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 96-470 |
| Cow position: | chr19:20677524-20677898 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 96-470 |
| Cow position: | chr19:20678112-20678486 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 82, 87 |
| Conread position: | 96-470 |
| Cow position: | chr19:20678196-20678570 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 139, 135 |
| Conread position: | 97-464 |
| Cow position: | chr19:20635387-20635020 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 97-470 |
| Cow position: | chr19:20635555-20635182 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-470 |
| Cow position: | chr19:23649297-23649669 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-470 |
| Cow position: | chr19:23649389-23649753 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-467 |
| Cow position: | chr19:14959670-14959373 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 249, 19 |
| Conread position: | 168-470 |
| Cow position: | chr19:23613413-23613715 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 151, 140 |
| Conread position: | 169-470 |
| Cow position: | chr19:14948401-14948100 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 247, 259 |
| Conread position: | 188-470 |
| Cow position: | chr19:23613349-23613631 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 213, 234 |
| Conread position: | 189-470 |
| Cow position: | chr19:20635631-20635350 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 203-470 |
| Cow position: | chr19:20635701-20635434 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 147, 138 |
| Conread position: | 220-470 |
| Cow position: | chr19:14940021-14940271 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-470 |
| Cow position: | chr19:14948433-14948184 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 0 |
Show alignments to all cow chromosomes.