Cow genome map
| Conread name: | rpigcb_10554.y1 |
| Conread position: | 2-470 |
| Cow position: | chr22:12432098-12431627 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 295 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 5-469 |
| Cow position: | chr22:12385519-12385050 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 301 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 5-469 |
| Cow position: | chr22:12399359-12398892 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 419 |
| Conread position: | 5-470 |
| Cow position: | chr22:12399443-12398975 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 297 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 5-470 |
| Cow position: | chr22:12399527-12399059 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 35, 153 |
| Conread position: | 5-470 |
| Cow position: | chr22:12399695-12399227 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 294 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 5-470 |
| Cow position: | chr22:12431591-12431123 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 304 |
| Conread position: | 5-470 |
| Cow position: | chr22:12432431-12431963 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 284 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 28, 408 |
| Conread position: | 5-470 |
| Cow position: | chr22:12458459-12457991 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 419 |
| Conread position: | 5-470 |
| Cow position: | chr22:12475820-12475352 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-470 |
| Cow position: | chr22:12476324-12475856 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 288 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 28, 419 |
| Conread position: | 5-470 |
| Cow position: | chr22:12498935-12499403 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 28, 319 |
| Conread position: | 5-470 |
| Cow position: | chr22:12499439-12499907 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 7-468 |
| Cow position: | chr22:11640757-11641221 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 82 |
| Conread position: | 7-470 |
| Cow position: | chr22:12432009-12431543 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 270 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 12-404 |
| Cow position: | chr22:46654253-46654648 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 21, 234 |
| Conread position: | 32-362 |
| Cow position: | chr22:12475622-12475292 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 306, 288 |
| Conread position: | 32-468 |
| Cow position: | chr22:12432485-12432049 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 32-469 |
| Cow position: | chr22:12385319-12384883 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 413, 0 |
| Conread position: | 32-470 |
| Cow position: | chr22:11640617-11641055 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 276 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 18, 27 |
| Conread position: | 32-470 |
| Cow position: | chr22:12399245-12398807 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 123, 138 |
| Conread position: | 32-470 |
| Cow position: | chr22:12419016-12418578 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 32-470 |
| Cow position: | chr22:12476378-12475940 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 266 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 283, 269 |
| Conread position: | 37-397 |
| Cow position: | chr22:11641042-11641402 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 49 |
| Conread position: | 52-470 |
| Cow position: | chr22:12385638-12385217 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 12, 189 |
| Conread position: | 52-470 |
| Cow position: | chr22:12431458-12431039 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 254 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 52-470 |
| Cow position: | chr22:14430180-14430599 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 34, 85 |
| Conread position: | 53-362 |
| Cow position: | chr22:12499657-12499967 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 11, 268 |
| Conread position: | 53-397 |
| Cow position: | chr22:11666562-11666907 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 29, 189 |
| Conread position: | 53-470 |
| Cow position: | chr22:12418912-12418494 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 266 |
| Conread position: | 53-470 |
| Cow position: | chr22:12499153-12499571 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 63-470 |
| Cow position: | chr22:12399550-12399143 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 71-445 |
| Cow position: | chr22:12418809-12418435 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 139, 114 |
| Conread position: | 75-470 |
| Cow position: | chr22:12476419-12476024 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 75-470 |
| Cow position: | chr22:12498840-12499235 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 43, 47 |
| Conread position: | 75-470 |
| Cow position: | chr22:14429868-14430263 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 175, 167 |
| Conread position: | 81-470 |
| Cow position: | chr22:11641002-11641391 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-397 |
| Cow position: | chr22:11701333-11701645 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 70 |
| Conread position: | 85-401 |
| Cow position: | chr22:12475653-12475337 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-401 |
| Cow position: | chr22:12499606-12499922 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-404 |
| Cow position: | chr22:12399108-12398789 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-447 |
| Cow position: | chr22:12458124-12457762 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 82 |
| Conread position: | 85-469 |
| Cow position: | chr22:12475821-12475437 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-469 |
| Cow position: | chr22:12499102-12499486 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 230, 219 |
| Conread position: | 85-469 |
| Cow position: | chr22:12499438-12499822 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-470 |
| Cow position: | chr22:11701165-11701550 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 62, 66 |
| Conread position: | 85-470 |
| Cow position: | chr22:12399696-12399311 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 312, 322 |
| Conread position: | 85-470 |
| Cow position: | chr22:12399780-12399395 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 75, 85 |
| Conread position: | 85-470 |
| Cow position: | chr22:12431256-12430871 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 309, 337 |
| Conread position: | 85-470 |
| Cow position: | chr22:12431760-12431375 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 321, 335 |
| Conread position: | 85-470 |
| Cow position: | chr22:12458208-12457823 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 86, 61 |
| Conread position: | 85-470 |
| Cow position: | chr22:12458292-12457907 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 233, 219 |
| Conread position: | 85-470 |
| Cow position: | chr22:12499354-12499739 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 100, 114 |
| Conread position: | 86-470 |
| Cow position: | chr22:12458627-12458243 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 229, 221 |
| Conread position: | 96-470 |
| Cow position: | chr22:12475978-12475604 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-467 |
| Cow position: | chr22:11640766-11641136 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 97-470 |
| Cow position: | chr22:14430058-14430431 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 157, 140 |
| Conread position: | 98-470 |
| Cow position: | chr22:12385337-12384965 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 97, 102 |
| Conread position: | 102-470 |
| Cow position: | chr22:12476140-12475772 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 44, 33 |
| Conread position: | 107-470 |
| Cow position: | chr22:12385666-12385301 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 115-470 |
| Cow position: | chr22:12419017-12418662 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 299, 307 |
| Conread position: | 127-470 |
| Cow position: | chr22:12399822-12399479 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-470 |
| Cow position: | chr22:12399900-12399563 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 280, 50 |
| Conread position: | 173-470 |
| Cow position: | chr22:12431756-12431459 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 186-470 |
| Cow position: | chr22:11640603-11640887 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 82 |
| Conread position: | 186-470 |
| Cow position: | chr22:12432499-12432215 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-470 |
| Cow position: | chr22:12385415-12385133 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 139, 11 |
| Conread position: | 199-469 |
| Cow position: | chr22:14429656-14429926 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.