Cow genome map
| Conread name: | rpigcb_10554.y1 |
| Conread position: | 5-338 |
| Cow position: | chr23:24547013-24546677 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-396 |
| Cow position: | chr23:24547097-24546703 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 5-401 |
| Cow position: | chr23:25626596-25626995 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 5-448 |
| Cow position: | chr23:25660300-25660746 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 5-458 |
| Cow position: | chr23:24547265-24546809 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 5-470 |
| Cow position: | chr23:24639449-24639917 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 31, 50 |
| Conread position: | 5-470 |
| Cow position: | chr23:25626515-25626980 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 5-470 |
| Cow position: | chr23:25698591-25698123 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 283 |
| Conread position: | 7-373 |
| Cow position: | chr23:25724061-25723692 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 8, 59 |
| Conread position: | 7-470 |
| Cow position: | chr23:25660218-25660684 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 334 |
| Conread position: | 13-470 |
| Cow position: | chr23:24547173-24546713 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 13-470 |
| Cow position: | chr23:24639289-24639749 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 277 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 100 |
| Conread position: | 15-470 |
| Cow position: | chr23:24560897-24560441 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 287 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 18, 293 |
| Conread position: | 32-446 |
| Cow position: | chr23:24535866-24535452 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 32-450 |
| Cow position: | chr23:24560543-24560125 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 32-450 |
| Cow position: | chr23:24626319-24626736 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 34-459 |
| Cow position: | chr23:25660164-25660589 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 37-382 |
| Cow position: | chr23:24639736-24640081 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 37-470 |
| Cow position: | chr23:24560706-24560273 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 52-470 |
| Cow position: | chr23:24560608-24560189 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 58-434 |
| Cow position: | chr23:25724090-25723714 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-470 |
| Cow position: | chr23:24522602-24522203 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 85-470 |
| Cow position: | chr23:24547266-24546881 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 91-470 |
| Cow position: | chr23:24535975-24535596 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-395 |
| Cow position: | chr23:25626190-25626488 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 71 |
| Conread position: | 99-470 |
| Cow position: | chr23:24626302-24626673 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 216, 205 |
| Conread position: | 99-470 |
| Cow position: | chr23:25660145-25660516 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 229, 205 |
| Conread position: | 109-470 |
| Cow position: | chr23:24560718-24560357 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 206, 198 |
| Conread position: | 154-470 |
| Cow position: | chr23:25698607-25698291 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 284, 299 |
| Conread position: | 163-470 |
| Cow position: | chr23:25698682-25698375 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 66, 75 |
| Conread position: | 167-470 |
| Cow position: | chr23:24547268-24546965 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 148, 140 |
| Conread position: | 167-470 |
| Cow position: | chr23:24639194-24639497 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 167-470 |
| Cow position: | chr23:24639278-24639581 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 102, 111 |
| Conread position: | 168-470 |
| Cow position: | chr23:25626009-25626311 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 252, 234 |
| Conread position: | 169-470 |
| Cow position: | chr23:25724063-25723762 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-470 |
| Cow position: | chr23:24547288-24547049 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 92, 86 |
| Conread position: | 231-470 |
| Cow position: | chr23:25724085-25723846 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 92, 82 |
| Conread position: | 294-470 |
| Cow position: | chr23:25724106-25723930 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.