Cow genome map
| Conread name: | rpigcb_10554.y1 |
| Conread position: | 5-363 |
| Cow position: | chr7:3180517-3180877 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 5-395 |
| Cow position: | chr7:1439871-1440263 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 5-470 |
| Cow position: | chr7:1439705-1440170 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 5-470 |
| Cow position: | chr7:3179761-3180229 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 302 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 5-470 |
| Cow position: | chr7:18390226-18390694 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 5-470 |
| Cow position: | chr7:42878960-42878492 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 5-470 |
| Cow position: | chr7:42879296-42878828 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 31-470 |
| Cow position: | chr7:11601178-11600739 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 32-469 |
| Cow position: | chr7:42879182-42878745 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 32-470 |
| Cow position: | chr7:1014949-1015387 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 269 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 30, 45 |
| Conread position: | 32-470 |
| Cow position: | chr7:8324827-8325265 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 33-456 |
| Cow position: | chr7:1015034-1015457 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 33-470 |
| Cow position: | chr7:3180212-3180649 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 124, 135 |
| Conread position: | 53-312 |
| Cow position: | chr7:1440005-1440264 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-452 |
| Cow position: | chr7:42878741-42878342 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 13, 254 |
| Conread position: | 63-470 |
| Cow position: | chr7:42879067-42878660 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 336, 351 |
| Conread position: | 66-447 |
| Cow position: | chr7:42878644-42878263 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-470 |
| Cow position: | chr7:42878811-42878408 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-470 |
| Cow position: | chr7:8325115-8325517 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 82-397 |
| Cow position: | chr7:8325801-8326116 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 169, 160 |
| Conread position: | 82-448 |
| Cow position: | chr7:3180429-3180795 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 82-470 |
| Cow position: | chr7:8277908-8278296 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 100, 91 |
| Conread position: | 82-470 |
| Cow position: | chr7:8325633-8326021 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 253 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 78, 56 |
| Conread position: | 82-470 |
| Cow position: | chr7:42878964-42878576 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 100, 95 |
| Conread position: | 84-470 |
| Cow position: | chr7:3180011-3180397 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 74, 86 |
| Conread position: | 85-449 |
| Cow position: | chr7:1014918-1015282 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 77 |
| Conread position: | 85-470 |
| Cow position: | chr7:1014750-1015135 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 84 |
| Conread position: | 85-470 |
| Cow position: | chr7:1014834-1015219 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-470 |
| Cow position: | chr7:1439870-1440254 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 328, 105 |
| Conread position: | 85-470 |
| Cow position: | chr7:3179760-3180145 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 85-470 |
| Cow position: | chr7:3179928-3180313 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-470 |
| Cow position: | chr7:3180096-3180481 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 328, 312 |
| Conread position: | 85-470 |
| Cow position: | chr7:8277407-8277792 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 169, 158 |
| Conread position: | 85-470 |
| Cow position: | chr7:8277743-8278128 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 108, 115 |
| Conread position: | 85-470 |
| Cow position: | chr7:18390057-18390442 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 70, 76 |
| Conread position: | 89-441 |
| Cow position: | chr7:11600784-11600432 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 138, 131 |
| Conread position: | 91-470 |
| Cow position: | chr7:11600866-11600487 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 62, 57 |
| Conread position: | 96-470 |
| Cow position: | chr7:8325311-8325685 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 82, 63 |
| Conread position: | 97-470 |
| Cow position: | chr7:8243545-8243918 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-470 |
| Cow position: | chr7:8325732-8326105 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 81, 56 |
| Conread position: | 123-470 |
| Cow position: | chr7:1014704-1015051 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 159-468 |
| Cow position: | chr7:11601218-11600909 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 263, 256 |
| Conread position: | 168-470 |
| Cow position: | chr7:3179759-3180061 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-470 |
| Cow position: | chr7:8324892-8325181 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 58 |
| Conread position: | 185-470 |
| Cow position: | chr7:1014268-1014553 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 138, 116 |
| Conread position: | 189-470 |
| Cow position: | chr7:11601271-11600991 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.