Cow genome map
| Conread name: | rpigcb_10554.y1 |
| Conread position: | 5-464 |
| Cow position: | chr8:45201502-45201964 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 28, 302 |
| Conread position: | 5-467 |
| Cow position: | chr8:55581222-55581687 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 276 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 5-470 |
| Cow position: | chr8:46816781-46817249 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 5-470 |
| Cow position: | chr8:48407314-48406846 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 7-457 |
| Cow position: | chr8:46816867-46817320 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 20-468 |
| Cow position: | chr8:48407635-48407184 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 69 |
| Conread position: | 32-389 |
| Cow position: | chr8:45201616-45201973 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 32-458 |
| Cow position: | chr8:45201448-45201874 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 275 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 32-470 |
| Cow position: | chr8:45201364-45201802 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 277 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 34-469 |
| Cow position: | chr8:55581002-55581437 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 279 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 52-403 |
| Cow position: | chr8:46816578-46816930 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 257 |
| Conread position: | 52-470 |
| Cow position: | chr8:46816242-46816661 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 16, 253 |
| Conread position: | 52-470 |
| Cow position: | chr8:46816494-46816913 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 111 |
| Conread position: | 52-470 |
| Cow position: | chr8:46816746-46817165 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 210 |
| Conread position: | 52-470 |
| Cow position: | chr8:55580935-55581354 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 53-470 |
| Cow position: | chr8:55581188-55581606 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 19, 369 |
| Conread position: | 55-470 |
| Cow position: | chr8:46816330-46816745 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 57-399 |
| Cow position: | chr8:46817004-46817347 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 256, 266 |
| Conread position: | 63-470 |
| Cow position: | chr8:46816002-46816409 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 25 |
| Conread position: | 64-470 |
| Cow position: | chr8:46816675-46817081 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 80-470 |
| Cow position: | chr8:55580880-55581270 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 126, 121 |
| Conread position: | 84-397 |
| Cow position: | chr8:55581388-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-470 |
| Cow position: | chr8:48407315-48406930 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 239, 234 |
| Conread position: | 85-470 |
| Cow position: | chr8:48407399-48407014 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-470 |
| Cow position: | chr8:55581137-55581522 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 316, 327 |
| Conread position: | 87-470 |
| Cow position: | chr8:45200999-45201382 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 231, 217 |
| Conread position: | 97-470 |
| Cow position: | chr8:48407051-48406678 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 103 |
| Conread position: | 168-470 |
| Cow position: | chr8:48406728-48406426 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-470 |
| Cow position: | chr8:48407568-48407266 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-470 |
| Cow position: | chr8:45200949-45201214 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 216-457 |
| Cow position: | chr8:6958054-6957813 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.