Cow genome map
| Conread name: | rpigcb_10554.y1 |
| Conread position: | 5-452 |
| Cow position: | chrX:25324767-25324317 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 5-457 |
| Cow position: | chrX:29045112-29044657 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 160 |
| Conread position: | 5-470 |
| Cow position: | chrX:25309786-25310254 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 5-470 |
| Cow position: | chrX:25310038-25310506 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 289 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 28, 167 |
| Conread position: | 5-470 |
| Cow position: | chrX:25325187-25324719 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 295 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 5-470 |
| Cow position: | chrX:25325271-25324803 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 397 |
| Conread position: | 23-469 |
| Cow position: | chrX:29045180-29044729 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 389 |
| Conread position: | 32-458 |
| Cow position: | chrX:25310152-25310578 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 116, 130 |
| Conread position: | 52-376 |
| Cow position: | chrX:29044979-29044654 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 52-448 |
| Cow position: | chrX:25324634-25324237 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 16, 256 |
| Conread position: | 53-470 |
| Cow position: | chrX:25324801-25324383 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 15, 355 |
| Conread position: | 53-470 |
| Cow position: | chrX:25325473-25325055 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 19, 363 |
| Conread position: | 56-470 |
| Cow position: | chrX:25325049-25324635 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 58-470 |
| Cow position: | chrX:25325383-25324971 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 112, 81 |
| Conread position: | 59-470 |
| Cow position: | chrX:25325802-25325391 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 261 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-470 |
| Cow position: | chrX:25324870-25324467 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 91 |
| Conread position: | 73-387 |
| Cow position: | chrX:14181255-14180941 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-458 |
| Cow position: | chrX:25309785-25310158 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 151, 139 |
| Conread position: | 85-468 |
| Cow position: | chrX:29045281-29044898 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 328, 320 |
| Conread position: | 85-470 |
| Cow position: | chrX:25325524-25325139 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 86-470 |
| Cow position: | chrX:29045361-29044980 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 84, 44 |
| Conread position: | 97-470 |
| Cow position: | chrX:25309713-25310086 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 166-470 |
| Cow position: | chrX:25309698-25310002 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 157, 151 |
| Conread position: | 190-449 |
| Cow position: | chrX:29045743-29045484 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 125, 111 |
Show alignments to all cow chromosomes.