Cow genome map

Conread name: rpigcb_11416.y1

Conread position: 1-261
Cow position: chr11:32478032-32477760 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-264
Cow position: chr11:24600770-24601037 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 213

Conread position: 1-264
Cow position: chr11:64353542-64353267 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-272
Cow position: chr11:57185145-57185428 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-323
Cow position: chr11:29614172-29614506 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-323
Cow position: chr11:38793366-38793691 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 83, 126

Conread position: 1-331
Cow position: chr11:26400260-26400603 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 66

Conread position: 1-333
Cow position: chr11:9707928-9708272 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr11:10958610-10958953 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 292

Conread position: 1-333
Cow position: chr11:17980511-17980170 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 1-333
Cow position: chr11:17998153-17997810 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr11:28631313-28631657 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr11:32876163-32875819 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr11:50833979-50833635 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr11:59444766-59444422 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr11:63652895-63652553 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 173

Conread position: 1-334
Cow position: chr11:22933843-22933502 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 52

Conread position: 1-334
Cow position: chr11:58805040-58804697 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 106, 129

Conread position: 1-341
Cow position: chr11:66731912-66732259 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 84

Conread position: 1-346
Cow position: chr11:48982070-48982426 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 167

Conread position: 1-380
Cow position: chr11:53429242-53428845 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 326

Conread position: 1-383
Cow position: chr11:86578706-86579106 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 26

Conread position: 1-395
Cow position: chr11:15995266-15995687 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 1-411
Cow position: chr11:9154116-9153694 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 1-437
Cow position: chr11:50510892-50510433 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-441
Cow position: chr11:24494028-24493564 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-441
Cow position: chr11:58050145-58049688 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 173

Conread position: 1-453
Cow position: chr11:37279796-37279326 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 164

Conread position: 1-454
Cow position: chr11:3495823-3496300 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-482
Cow position: chr11:26068339-26067817 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 52

Conread position: 1-484
Cow position: chr11:33688240-33687777 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 78

Conread position: 1-495
Cow position: chr11:34297281-34297777 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 82

Conread position: 1-495
Cow position: chr11:38832697-38832181 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 159

Conread position: 1-507
Cow position: chr11:63478631-63479160 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-513
Cow position: chr11:417693-417157 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-517
Cow position: chr11:26122140-26121603 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 120

Conread position: 1-524
Cow position: chr11:9222843-9222353 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 338
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 349, 51

Conread position: 1-527
Cow position: chr11:10093653-10094196 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 29

Conread position: 1-534
Cow position: chr11:8829988-8829456 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 93

Conread position: 1-536
Cow position: chr11:57625409-57624848 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 1-538
Cow position: chr11:35738562-35738003 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-553
Cow position: chr11:80789613-80789032 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 296

Conread position: 1-562
Cow position: chr11:260367-259768 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 43

Conread position: 1-562
Cow position: chr11:2567898-2567329 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 106

Conread position: 1-562
Cow position: chr11:5273794-5273211 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 482

Conread position: 1-562
Cow position: chr11:7719735-7719147 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-562
Cow position: chr11:17104909-17104341 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 96

Conread position: 1-562
Cow position: chr11:25335920-25336501 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 93

Conread position: 1-562
Cow position: chr11:27833977-27833389 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 295

Conread position: 1-562
Cow position: chr11:28693190-28692618 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 159

Conread position: 1-562
Cow position: chr11:35242090-35241518 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 349

Conread position: 1-562
Cow position: chr11:41106608-41106029 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 104

Conread position: 1-562
Cow position: chr11:49237185-49236610 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 145

Conread position: 1-562
Cow position: chr11:73798918-73798341 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 157

Conread position: 1-569
Cow position: chr11:2285493-2286087 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-569
Cow position: chr11:8444207-8443617 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 133

Conread position: 1-569
Cow position: chr11:22618166-22617572 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-569
Cow position: chr11:75353983-75354579 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 322

Conread position: 1-569
Cow position: chr11:85391067-85390489 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 12

Conread position: 1-570
Cow position: chr11:3238081-3238677 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr11:10872045-10871450 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr11:16548170-16547575 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr11:20285838-20285243 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr11:26592997-26592403 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 571

Conread position: 1-570
Cow position: chr11:32454834-32455429 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr11:34638724-34638129 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr11:38574704-38574110 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 72

Conread position: 1-570
Cow position: chr11:39151378-39151964 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 440

Conread position: 1-570
Cow position: chr11:41094082-41093491 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 462

Conread position: 1-570
Cow position: chr11:41314076-41314670 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr11:58136497-58137086 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 454

Conread position: 1-570
Cow position: chr11:61397835-61397246 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 104

Conread position: 1-570
Cow position: chr11:63390699-63390107 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 173

Conread position: 1-570
Cow position: chr11:65760826-65760232 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 267

Conread position: 1-570
Cow position: chr11:83000809-83001403 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 437

Conread position: 1-571
Cow position: chr11:2835044-2835637 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 460

Conread position: 1-571
Cow position: chr11:4024569-4023982 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 300

Conread position: 1-571
Cow position: chr11:5482665-5482070 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 77

Conread position: 1-571
Cow position: chr11:10698966-10698370 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr11:10850901-10851490 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 85

Conread position: 1-571
Cow position: chr11:11990778-11991375 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 90

Conread position: 1-571
Cow position: chr11:12354112-12353516 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr11:13087887-13087291 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr11:14260176-14259589 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 61

Conread position: 1-571
Cow position: chr11:15495168-15495764 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr11:18920806-18920222 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 189

Conread position: 1-571
Cow position: chr11:19099706-19099112 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 447

Conread position: 1-571
Cow position: chr11:20731442-20730847 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 367

Conread position: 1-571
Cow position: chr11:26550258-26550852 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 57

Conread position: 1-571
Cow position: chr11:27938388-27938968 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 297

Conread position: 1-571
Cow position: chr11:35542288-35541701 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 316

Conread position: 1-571
Cow position: chr11:38599934-38599338 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr11:41167914-41167318 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr11:44254854-44255447 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 142

Conread position: 1-571
Cow position: chr11:44580453-44579858 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr11:52846257-52846851 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 22

Conread position: 1-571
Cow position: chr11:56463142-56463737 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-571
Cow position: chr11:58139485-58140066 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 159

Conread position: 1-571
Cow position: chr11:63860863-63860268 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 267

Conread position: 1-571
Cow position: chr11:65281799-65282385 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 145

Conread position: 1-571
Cow position: chr11:67296231-67295630 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 76

Conread position: 1-571
Cow position: chr11:67453435-67454029 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 297

Conread position: 1-571
Cow position: chr11:67599359-67599959 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 218

Conread position: 1-571
Cow position: chr11:67920552-67919966 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 103

Conread position: 1-571
Cow position: chr11:71332281-71332875 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr11:73137371-73137954 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 255

Conread position: 1-571
Cow position: chr11:84966894-84967484 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 103

Conread position: 1-572
Cow position: chr11:36930739-36930155 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 76

Conread position: 1-572
Cow position: chr11:62575199-62574624 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 124

Conread position: 1-573
Cow position: chr11:3796018-3796589 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-573
Cow position: chr11:10365606-10365004 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 81

Conread position: 1-573
Cow position: chr11:24334213-24333615 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chr11:28125295-28125891 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-573
Cow position: chr11:30776743-30777341 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chr11:30929162-30929760 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chr11:35142552-35141958 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 449

Conread position: 1-573
Cow position: chr11:41261148-41260551 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 445

Conread position: 1-573
Cow position: chr11:43361933-43361361 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 35

Conread position: 1-573
Cow position: chr11:59871596-59872183 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 116

Conread position: 1-573
Cow position: chr11:74928583-74929185 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 260

Conread position: 1-573
Cow position: chr11:84773945-84774540 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 303

Conread position: 1-577
Cow position: chr11:1667407-1667999 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 84

Conread position: 1-577
Cow position: chr11:21471413-21472005 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 44

Conread position: 1-577
Cow position: chr11:44233214-44233791 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 132

Conread position: 1-577
Cow position: chr11:46412431-46413026 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 62

Conread position: 1-577
Cow position: chr11:75511412-75510820 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 370

Conread position: 2-521
Cow position: chr11:21477390-21477882 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 329
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 177, 18

Conread position: 4-280
Cow position: chr11:39484065-39484339 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 180
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 102, 135

Conread position: 4-341
Cow position: chr11:25808960-25808618 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 20

Conread position: 4-414
Cow position: chr11:60824558-60824987 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 292
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 67, 80

Conread position: 4-433
Cow position: chr11:33733795-33733355 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 282

Conread position: 4-475
Cow position: chr11:81067532-81068008 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 200

Conread position: 4-495
Cow position: chr11:32077999-32077485 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 130

Conread position: 4-554
Cow position: chr11:25759536-25760099 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 204

Conread position: 4-557
Cow position: chr11:67849198-67848601 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 501

Conread position: 4-558
Cow position: chr11:76767201-76767771 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 300

Conread position: 4-562
Cow position: chr11:3682053-3681487 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 60

Conread position: 4-562
Cow position: chr11:8551591-8552160 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 343

Conread position: 4-562
Cow position: chr11:73466421-73465849 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 153

Conread position: 4-570
Cow position: chr11:17548941-17549533 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-570
Cow position: chr11:17853877-17854469 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-570
Cow position: chr11:44915904-44915312 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 316

Conread position: 4-570
Cow position: chr11:51034072-51034651 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 48

Conread position: 4-571
Cow position: chr11:1493065-1492497 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 269

Conread position: 4-571
Cow position: chr11:6343243-6343835 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 164

Conread position: 4-571
Cow position: chr11:12317287-12316686 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-571
Cow position: chr11:15835699-15836289 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 41

Conread position: 4-571
Cow position: chr11:16229864-16229277 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 213

Conread position: 4-571
Cow position: chr11:62791678-62792267 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 578

Conread position: 4-573
Cow position: chr11:44106462-44107056 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 165

Conread position: 4-577
Cow position: chr11:17782244-17781661 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 262

Conread position: 4-577
Cow position: chr11:41599905-41599311 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 294

Conread position: 4-577
Cow position: chr11:82346357-82345771 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 43

Conread position: 5-273
Cow position: chr11:41177701-41177980 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 5-333
Cow position: chr11:27922577-27922920 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 5-399
Cow position: chr11:67863492-67863093 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 270
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 80

Conread position: 5-420
Cow position: chr11:8018549-8018983 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 282
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 209

Conread position: 5-484
Cow position: chr11:21729236-21728732 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 271

Conread position: 5-539
Cow position: chr11:48168283-48167744 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 99

Conread position: 5-558
Cow position: chr11:48427932-48428501 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 94

Conread position: 5-562
Cow position: chr11:9388122-9388700 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 25

Conread position: 5-562
Cow position: chr11:9870285-9870870 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 54

Conread position: 5-571
Cow position: chr11:19507114-19507709 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 125

Conread position: 5-572
Cow position: chr11:41101700-41102281 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 248

Conread position: 5-573
Cow position: chr11:11591763-11592359 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 33

Conread position: 5-573
Cow position: chr11:49935956-49935370 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 66

Conread position: 5-577
Cow position: chr11:48485291-48484696 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 458

Conread position: 5-577
Cow position: chr11:73513588-73512989 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 322

Conread position: 6-277
Cow position: chr11:67954337-67954061 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 89

Conread position: 6-410
Cow position: chr11:11256857-11257253 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 277
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 99, 17

Conread position: 7-268
Cow position: chr11:40134021-40133764 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 184, 23

Conread position: 7-570
Cow position: chr11:30255220-30255813 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 7

Conread position: 8-339
Cow position: chr11:83284680-83285011 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 166

Conread position: 9-306
Cow position: chr11:52127997-52128306 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-332
Cow position: chr11:7121175-7120840 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 9-394
Cow position: chr11:40486947-40487345 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 79

Conread position: 9-495
Cow position: chr11:74990408-74990919 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-513
Cow position: chr11:19061286-19060757 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-549
Cow position: chr11:31929244-31929789 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 33

Conread position: 9-549
Cow position: chr11:63167710-63167168 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 74

Conread position: 9-558
Cow position: chr11:30056995-30057560 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 305

Conread position: 9-562
Cow position: chr11:49171710-49171139 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 402

Conread position: 9-567
Cow position: chr11:72368841-72369423 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 447

Conread position: 9-569
Cow position: chr11:40402971-40402411 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 87

Conread position: 9-570
Cow position: chr11:12177876-12178463 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-570
Cow position: chr11:28226991-28226403 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 9-570
Cow position: chr11:40457963-40458548 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 432

Conread position: 9-570
Cow position: chr11:47973064-47972493 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 440

Conread position: 9-571
Cow position: chr11:25564540-25565123 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 174

Conread position: 9-571
Cow position: chr11:33601840-33601263 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 96

Conread position: 9-571
Cow position: chr11:38640739-38641313 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 284

Conread position: 9-571
Cow position: chr11:44154290-44153707 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 181

Conread position: 9-571
Cow position: chr11:75402719-75402149 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 106

Conread position: 9-573
Cow position: chr11:1505209-1504617 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 190

Conread position: 9-577
Cow position: chr11:18146757-18146186 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 86

Conread position: 10-548
Cow position: chr11:51289358-51289904 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 10-562
Cow position: chr11:76566245-76566821 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 485

Conread position: 10-572
Cow position: chr11:27725112-27724524 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 11-256
Cow position: chr11:62225048-62225303 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 163

Conread position: 11-268
Cow position: chr11:10043293-10043024 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 11-482
Cow position: chr11:12077611-12077137 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 51

Conread position: 14-338
Cow position: chr11:50949740-50950079 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 161

Conread position: 14-537
Cow position: chr11:59369240-59368696 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 41

Conread position: 14-566
Cow position: chr11:80591153-80591727 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 14-570
Cow position: chr11:11316039-11315454 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 14-570
Cow position: chr11:54302330-54302912 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 15-384
Cow position: chr11:10873390-10873754 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 136

Conread position: 16-573
Cow position: chr11:17279791-17279219 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 83

Conread position: 21-495
Cow position: chr11:67348315-67347828 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 436

Conread position: 26-557
Cow position: chr11:62787479-62788018 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 38

Conread position: 27-514
Cow position: chr11:4061133-4060636 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 138

Conread position: 28-482
Cow position: chr11:40773253-40772788 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 311
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 155, 91

Conread position: 28-571
Cow position: chr11:46781261-46780694 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 94

Conread position: 29-550
Cow position: chr11:77748876-77749398 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 30-323
Cow position: chr11:35426011-35425721 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 120

Conread position: 30-562
Cow position: chr11:46583599-46583048 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 104

Conread position: 30-573
Cow position: chr11:26786049-26786588 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 368
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 76, 195

Conread position: 31-573
Cow position: chr11:27660044-27660615 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 509

Conread position: 33-573
Cow position: chr11:63507320-63507878 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 144

Conread position: 38-562
Cow position: chr11:23494568-23495117 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 256

Conread position: 41-562
Cow position: chr11:84532440-84531916 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 37

Conread position: 42-339
Cow position: chr11:87155177-87154880 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 149, 63

Conread position: 43-571
Cow position: chr11:23883169-23883707 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 459

Conread position: 44-333
Cow position: chr11:59583253-59583554 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 44-571
Cow position: chr11:66390184-66389639 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 250

Conread position: 44-573
Cow position: chr11:75711430-75710875 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 45-570
Cow position: chr11:38505406-38504856 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 7

Conread position: 46-298
Cow position: chr11:81317051-81316791 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 60, 114

Conread position: 47-571
Cow position: chr11:62009976-62009425 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 248

Conread position: 47-577
Cow position: chr11:67744214-67744763 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 22

Conread position: 49-570
Cow position: chr11:8366388-8366935 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 52-473
Cow position: chr11:52515355-52515774 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 287
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 11, 96

Conread position: 52-571
Cow position: chr11:30700325-30700860 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 456

Conread position: 56-571
Cow position: chr11:15988123-15988672 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 510

Conread position: 59-577
Cow position: chr11:7704534-7705053 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 292

Conread position: 62-549
Cow position: chr11:5584595-5584095 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 142

Conread position: 66-451
Cow position: chr11:8844022-8844431 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 265
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 39, 98

Conread position: 66-570
Cow position: chr11:31836035-31836559 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 67

Conread position: 74-334
Cow position: chr11:56652386-56652117 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 100

Conread position: 74-495
Cow position: chr11:70030274-70030717 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 107

Conread position: 76-562
Cow position: chr11:26482427-26482940 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 81

Conread position: 77-570
Cow position: chr11:15047315-15047832 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 392

Conread position: 85-539
Cow position: chr11:68130275-68130731 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 150

Conread position: 85-573
Cow position: chr11:45155883-45155368 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 344
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 206

Conread position: 86-562
Cow position: chr11:30164437-30164915 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 330
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 20, 204

Conread position: 86-577
Cow position: chr11:42794069-42793555 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 46

Conread position: 88-318
Cow position: chr11:15128650-15128889 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 19

Conread position: 88-571
Cow position: chr11:8246062-8246560 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 46

Conread position: 93-570
Cow position: chr11:7151872-7152371 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 106-299
Cow position: chr11:31487120-31487313 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 37

Conread position: 106-406
Cow position: chr11:56227817-56228136 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 224
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 93, 152

Conread position: 106-492
Cow position: chr11:48411412-48411823 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 106-523
Cow position: chr11:34299023-34298595 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 290
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 81, 37

Conread position: 106-562
Cow position: chr11:32762340-32762816 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 259

Conread position: 106-570
Cow position: chr11:44893986-44893504 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 59

Conread position: 106-571
Cow position: chr11:21853363-21852868 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 106-571
Cow position: chr11:31834373-31833885 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 106-577
Cow position: chr11:49411666-49411194 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 65

Conread position: 106-577
Cow position: chr11:69403333-69402841 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 433

Conread position: 107-562
Cow position: chr11:20601238-20601675 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 33

Conread position: 108-550
Cow position: chr11:84135290-84134836 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 302
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 188

Conread position: 108-570
Cow position: chr11:2294170-2293685 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 109-570
Cow position: chr11:4734174-4734658 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 111-537
Cow position: chr11:66514741-66514305 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 280
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 43

Conread position: 112-472
Cow position: chr11:3230218-3230596 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 113-570
Cow position: chr11:30087771-30088251 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 114-549
Cow position: chr11:38235873-38235419 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 165

Conread position: 117-341
Cow position: chr11:42517238-42517471 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 73, 40

Conread position: 118-562
Cow position: chr11:9432286-9432739 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 42

Conread position: 120-562
Cow position: chr11:47758086-47757617 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 120-571
Cow position: chr11:44870428-44870895 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 67

Conread position: 131-329
Cow position: chr11:21372168-21371961 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 131-549
Cow position: chr11:12111840-12112282 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 159

Conread position: 131-562
Cow position: chr11:77236779-77237208 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 15

Conread position: 131-567
Cow position: chr11:1626241-1625794 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 131-570
Cow position: chr11:75256103-75256565 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 133-495
Cow position: chr11:61132038-61131655 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 0

Conread position: 133-514
Cow position: chr11:77034177-77033775 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 272
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 61, 395

Conread position: 133-535
Cow position: chr11:43917349-43917772 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 183

Conread position: 133-570
Cow position: chr11:23904197-23904653 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 309

Conread position: 136-559
Cow position: chr11:32956898-32956476 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 209

Conread position: 136-559
Cow position: chr11:32978084-32977666 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 206

Conread position: 142-418
Cow position: chr11:38638401-38638108 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 194
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 143-562
Cow position: chr11:53772607-53773031 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 143-570
Cow position: chr11:74389124-74389570 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 299

Conread position: 144-514
Cow position: chr11:7386342-7386708 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 253
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 64

Conread position: 145-562
Cow position: chr11:70602350-70601919 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 145-570
Cow position: chr11:2801332-2800885 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 345

Conread position: 148-495
Cow position: chr11:8498997-8499360 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 249
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 17

Conread position: 150-562
Cow position: chr11:70424324-70424751 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 21

Conread position: 151-571
Cow position: chr11:63261274-63260836 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 293

Conread position: 152-570
Cow position: chr11:47573602-47573161 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 153-574
Cow position: chr11:38842561-38842995 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 291
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 41, 184

Conread position: 156-573
Cow position: chr11:52298225-52297784 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 294
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 47, 348

Conread position: 162-562
Cow position: chr11:48658677-48659095 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 166-571
Cow position: chr11:38097782-38097365 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 66

Conread position: 166-573
Cow position: chr11:66859040-66858606 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 293
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 283

Conread position: 192-534
Cow position: chr11:31236423-31236064 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 192-552
Cow position: chr11:37069271-37068889 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 106

Conread position: 195-562
Cow position: chr11:71078409-71078790 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 29

Conread position: 201-549
Cow position: chr11:7307039-7307382 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 13

Conread position: 201-571
Cow position: chr11:4032492-4032110 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 28, 183

Conread position: 218-559
Cow position: chr11:58816605-58816954 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 245
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 119, 251

Conread position: 219-571
Cow position: chr11:33687461-33687112 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 5

Conread position: 221-383
Cow position: chr11:25332725-25332557 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 5, 72

Conread position: 221-558
Cow position: chr11:21459854-21460201 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 10, 202

Conread position: 221-558
Cow position: chr11:43997082-43996732 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 223
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 27

Conread position: 221-577
Cow position: chr11:10303130-10302772 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 35

Conread position: 223-533
Cow position: chr11:65410085-65409748 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 29, 57

Conread position: 223-577
Cow position: chr11:28394084-28394446 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 139

Conread position: 224-514
Cow position: chr11:64047401-64047704 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 117, 262

Conread position: 224-525
Cow position: chr11:9079319-9079010 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 118, 55

Conread position: 224-544
Cow position: chr11:67388229-67388545 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 111, 55

Conread position: 224-549
Cow position: chr11:9214753-9214415 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 17

Conread position: 224-558
Cow position: chr11:11857723-11858070 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 224-562
Cow position: chr11:14650221-14649876 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 213

Conread position: 224-562
Cow position: chr11:33189586-33189936 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-565
Cow position: chr11:50282395-50282043 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 344

Conread position: 224-569
Cow position: chr11:76370825-76370455 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 109

Conread position: 224-570
Cow position: chr11:4596582-4596942 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position: chr11:10100063-10100423 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position: chr11:24397383-24397023 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position: chr11:54303918-54304278 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position: chr11:66664404-66664045 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 111, 86

Conread position: 224-571
Cow position: chr11:81576665-81576311 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 119, 58

Conread position: 224-573
Cow position: chr11:21820385-21820027 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 78

Conread position: 224-573
Cow position: chr11:46142971-46142611 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 219

Conread position: 224-577
Cow position: chr11:9295840-9295478 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 73, 68

Conread position: 224-577
Cow position: chr11:26467320-26467682 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 119, 57

Conread position: 224-577
Cow position: chr11:42380451-42380801 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 109, 19

Conread position: 226-406
Cow position: chr11:64904104-64904291 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 166

Conread position: 227-562
Cow position: chr11:64844089-64844419 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 68

Conread position: 229-571
Cow position: chr11:37304209-37304560 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 234
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 106, 63

Conread position: 230-536
Cow position: chr11:61846923-61846612 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 62, 154

Conread position: 231-488
Cow position: chr11:81388007-81388272 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 155

Conread position: 237-546
Cow position: chr11:31802691-31802370 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 98, 0

Conread position: 241-562
Cow position: chr11:44937905-44938236 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 242-571
Cow position: chr11:75196111-75195768 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 95, 0

Conread position: 242-577
Cow position: chr11:4625711-4625387 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 101, 26

Conread position: 244-573
Cow position: chr11:70978357-70978014 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 91, 0

Conread position: 245-577
Cow position: chr11:54361032-54361374 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 285

Conread position: 246-495
Cow position: chr11:29949300-29949040 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 80, 236

Conread position: 249-562
Cow position: chr11:49075271-49074966 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 78

Conread position: 250-571
Cow position: chr11:65670383-65670718 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 6

Conread position: 254-555
Cow position: chr11:17863128-17862819 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 277

Conread position: 257-558
Cow position: chr11:81337856-81337555 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 66, 177

Conread position: 263-570
Cow position: chr11:44356833-44356513 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 72, 261

Conread position: 266-490
Cow position: chr11:32068200-32067962 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 270-571
Cow position: chr11:72313652-72313967 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 65, 0

Conread position: 271-573
Cow position: chr11:41178013-41178328 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 70, 0

Conread position: 284-563
Cow position: chr11:8234181-8233897 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 107

Conread position: 323-573
Cow position: chr11:74564687-74564436 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 63, 14

Conread position: 340-517
Cow position: chr11:43526926-43526744 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.