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Cow genome map

           
Conread name:
           
rpigcb_11416.y1
        

               
Conread position:
               
1-277
               

               
Cow position:
               
chr12:40306362-40306650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr12:62144-61800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr12:21888979-21888635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr12:31829386-31829042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr12:32340193-32339849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr12:33925634-33925290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr12:15796994-15797324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 91
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr12:21904430-21904770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 139
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr12:21314366-21314014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 173
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr12:47803235-47803613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
107, 181
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr12:28737589-28737984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
102, 133
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr12:21484475-21484922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 142
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr12:32656615-32657076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr12:5107121-5107598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr12:25097202-25096728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 373
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr12:17969052-17969531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 116
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr12:20459655-20459141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 72
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr12:6106285-6105787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 159
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr12:258793-259314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr12:27958462-27957926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr12:16302275-16301738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr12:27994164-27994728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 509
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr12:12755093-12754531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 278
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr12:250249-249674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 103
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr12:7673965-7674550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:1007079-1007674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:1056444-1055851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 209
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:1511700-1511107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 255
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:8839316-8839912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:14568751-14568166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 259
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:15925688-15925095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 173
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:17718364-17718954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 293
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:21665199-21665796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:22517788-22517191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:23138265-23137670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:32147564-32146972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr12:32757760-32758352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 367
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:1886288-1885681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
77, 134
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:5110997-5110408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 162
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:10358759-10359353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 463
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:10931149-10931742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:11101312-11101907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:21074900-21075475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 37
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:21251248-21250655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:22202604-22202022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 103
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:22748278-22748875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:25266269-25265674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:27506586-27505991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 539
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:28013168-28012572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:32011715-32011118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 294
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:35367469-35368036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 103
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:36287949-36287352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 173
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:41338169-41337570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr12:42605112-42604525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 129
               

               
Conread position:
               
1-573
               

               
Cow position:
               
chr12:5713027-5713623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 414
               

               
Conread position:
               
1-573
               

               
Cow position:
               
chr12:32848636-32849233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
1-573
               

               
Cow position:
               
chr12:33296692-33297290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 442
               

               
Conread position:
               
1-573
               

               
Cow position:
               
chr12:48416681-48416092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 96
               

               
Conread position:
               
1-574
               

               
Cow position:
               
chr12:2285339-2285913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
1-574
               

               
Cow position:
               
chr12:9988623-9988040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 258
               

               
Conread position:
               
1-577
               

               
Cow position:
               
chr12:21211847-21212449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 319
               

               
Conread position:
               
1-577
               

               
Cow position:
               
chr12:25313649-25313049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr12:1774851-1774550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr12:8136922-8136569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
4-495
               

               
Cow position:
               
chr12:10164890-10164377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
4-557
               

               
Cow position:
               
chr12:32220165-32220743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 96
               

               
Conread position:
               
4-562
               

               
Cow position:
               
chr12:46112051-46111469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
4-569
               

               
Cow position:
               
chr12:3717207-3716619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 544
               

               
Conread position:
               
4-577
               

               
Cow position:
               
chr12:24557646-24558235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 156
               

               
Conread position:
               
5-333
               

               
Cow position:
               
chr12:1476592-1476255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
5-338
               

               
Cow position:
               
chr12:2242919-2242578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 92
               

               
Conread position:
               
5-341
               

               
Cow position:
               
chr12:3094564-3094207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
100, 86
               

               
Conread position:
               
5-341
               

               
Cow position:
               
chr12:19871282-19871629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
5-394
               

               
Cow position:
               
chr12:30686808-30687217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 290
               

               
Conread position:
               
5-538
               

               
Cow position:
               
chr12:17981477-17982017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 89
               

               
Conread position:
               
5-562
               

               
Cow position:
               
chr12:11582237-11582800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 141
               

               
Conread position:
               
5-571
               

               
Cow position:
               
chr12:27436077-27435506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 36
               

               
Conread position:
               
5-571
               

               
Cow position:
               
chr12:35311845-35311273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 156
               

               
Conread position:
               
5-577
               

               
Cow position:
               
chr12:17663028-17663612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 157
               

               
Conread position:
               
6-558
               

               
Cow position:
               
chr12:8841987-8841404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 139
               

               
Conread position:
               
7-563
               

               
Cow position:
               
chr12:15939792-15939232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 166
               

               
Conread position:
               
9-280
               

               
Cow position:
               
chr12:42232381-42232664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr12:27929720-27929395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
9-384
               

               
Cow position:
               
chr12:8773737-8774129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 152
               

               
Conread position:
               
9-454
               

               
Cow position:
               
chr12:35548055-35547595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 84
               

               
Conread position:
               
9-562
               

               
Cow position:
               
chr12:5226320-5226878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 95
               

               
Conread position:
               
9-570
               

               
Cow position:
               
chr12:14423421-14424015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
9-570
               

               
Cow position:
               
chr12:31027748-31027162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 159
               

               
Conread position:
               
9-570
               

               
Cow position:
               
chr12:39930240-39930823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
9-571
               

               
Cow position:
               
chr12:12928835-12928251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 164
               

               
Conread position:
               
9-571
               

               
Cow position:
               
chr12:25148546-25147959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 128
               

               
Conread position:
               
9-571
               

               
Cow position:
               
chr12:37562081-37562659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
9-571
               

               
Cow position:
               
chr12:38893435-38894022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 473
               

               
Conread position:
               
9-571
               

               
Cow position:
               
chr12:43681076-43681663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 500
               

               
Conread position:
               
9-573
               

               
Cow position:
               
chr12:20994693-20994094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 172
               

               
Conread position:
               
9-577
               

               
Cow position:
               
chr12:21610675-21611261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 134
               

               
Conread position:
               
14-577
               

               
Cow position:
               
chr12:23378208-23378782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 149
               

               
Conread position:
               
17-571
               

               
Cow position:
               
chr12:21057632-21057058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 162
               

               
Conread position:
               
25-528
               

               
Cow position:
               
chr12:21452890-21452363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
26-527
               

               
Cow position:
               
chr12:21497804-21497290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
66, 140
               

               
Conread position:
               
26-570
               

               
Cow position:
               
chr12:10075750-10076316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 150
               

               
Conread position:
               
33-571
               

               
Cow position:
               
chr12:24029384-24028824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 141
               

               
Conread position:
               
34-341
               

               
Cow position:
               
chr12:36569247-36568930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
35-333
               

               
Cow position:
               
chr12:36213376-36213685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 258
               

               
Conread position:
               
35-478
               

               
Cow position:
               
chr12:28571482-28571936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
35-572
               

               
Cow position:
               
chr12:15820828-15821377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
40-562
               

               
Cow position:
               
chr12:5165485-5166026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
46-562
               

               
Cow position:
               
chr12:41973665-41973127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 323
               

               
Conread position:
               
48-491
               

               
Cow position:
               
chr12:15760150-15760602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
52-332
               

               
Cow position:
               
chr12:23159387-23159105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
56-562
               

               
Cow position:
               
chr12:22979773-22979245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 118
               

               
Conread position:
               
66-329
               

               
Cow position:
               
chr12:23294363-23294637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 252
               

               
Conread position:
               
66-571
               

               
Cow position:
               
chr12:1093030-1093559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
67-570
               

               
Cow position:
               
chr12:36445517-36446043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
74-571
               

               
Cow position:
               
chr12:31329194-31328671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 403
               

               
Conread position:
               
85-333
               

               
Cow position:
               
chr12:21089792-21089532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 234
               

               
Conread position:
               
85-334
               

               
Cow position:
               
chr12:7961594-7961338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
85-562
               

               
Cow position:
               
chr12:2228718-2229219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
85-571
               

               
Cow position:
               
chr12:21432487-21433001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 210
               

               
Conread position:
               
94-525
               

               
Cow position:
               
chr12:24447709-24447253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
94-562
               

               
Cow position:
               
chr12:12178077-12177590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
103-495
               

               
Cow position:
               
chr12:26870088-26869671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 147
               

               
Conread position:
               
106-280
               

               
Cow position:
               
chr12:43602085-43601902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
106-311
               

               
Cow position:
               
chr12:18936000-18936214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
106-465
               

               
Cow position:
               
chr12:24205706-24206081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
106-570
               

               
Cow position:
               
chr12:15720391-15719912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 367
               

               
Conread position:
               
106-571
               

               
Cow position:
               
chr12:13043070-13042581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
106-571
               

               
Cow position:
               
chr12:31261246-31260776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 246
               

               
Conread position:
               
109-546
               

               
Cow position:
               
chr12:31217360-31217828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 138
               

               
Conread position:
               
109-570
               

               
Cow position:
               
chr12:3364061-3364545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
114-570
               

               
Cow position:
               
chr12:34176734-34177213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
117-562
               

               
Cow position:
               
chr12:22480307-22480766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 348
               

               
Conread position:
               
118-571
               

               
Cow position:
               
chr12:3070040-3070519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 83
               

               
Conread position:
               
131-571
               

               
Cow position:
               
chr12:8172106-8172564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
134-429
               

               
Cow position:
               
chr12:32483611-32483309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 37
               

               
Conread position:
               
143-333
               

               
Cow position:
               
chr12:19852468-19852664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
144-571
               

               
Cow position:
               
chr12:23474962-23475407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 241
               

               
Conread position:
               
145-338
               

               
Cow position:
               
chr12:39283307-39283104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
148-573
               

               
Cow position:
               
chr12:14214274-14214722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
149-340
               

               
Cow position:
               
chr12:1108333-1108525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 97
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr12:22686712-22687127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 172
               

               
Conread position:
               
152-571
               

               
Cow position:
               
chr12:6186929-6186492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 306
               

               
Conread position:
               
152-571
               

               
Cow position:
               
chr12:25838501-25838943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 5
               

               
Conread position:
               
153-571
               

               
Cow position:
               
chr12:21946217-21946640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
173-528
               

               
Cow position:
               
chr12:21557188-21557561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
179-559
               

               
Cow position:
               
chr12:29326607-29326975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
194-570
               

               
Cow position:
               
chr12:465343-464952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
201-573
               

               
Cow position:
               
chr12:32900876-32900491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 23
               

               
Conread position:
               
215-571
               

               
Cow position:
               
chr12:32088527-32088890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 353
               

               
Conread position:
               
215-577
               

               
Cow position:
               
chr12:22566610-22566977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
222-562
               

               
Cow position:
               
chr12:19872864-19873204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
223-480
               

               
Cow position:
               
chr12:23721283-23721536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 150
               

               
Conread position:
               
223-570
               

               
Cow position:
               
chr12:1855562-1855201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
224-524
               

               
Cow position:
               
chr12:27573391-27573701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 32
               

               
Conread position:
               
224-544
               

               
Cow position:
               
chr12:31533543-31533213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
224-562
               

               
Cow position:
               
chr12:8642052-8642390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
224-570
               

               
Cow position:
               
chr12:10790948-10790588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
224-571
               

               
Cow position:
               
chr12:30016772-30016419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 80
               

               
Conread position:
               
224-573
               

               
Cow position:
               
chr12:17787343-17786980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
224-576
               

               
Cow position:
               
chr12:45540692-45541031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 115
               

               
Conread position:
               
225-573
               

               
Cow position:
               
chr12:35135604-35135953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 102
               

               
Conread position:
               
231-577
               

               
Cow position:
               
chr12:1487789-1487430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
233-573
               

               
Cow position:
               
chr12:747309-747647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
234-570
               

               
Cow position:
               
chr12:32917638-32917985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
101, 189
               

               
Conread position:
               
235-573
               

               
Cow position:
               
chr12:22286625-22286274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
239-577
               

               
Cow position:
               
chr12:5904845-5905190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 269
               

               
Conread position:
               
243-570
               

               
Cow position:
               
chr12:14940282-14940623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
246-571
               

               
Cow position:
               
chr12:30593786-30593451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
247-573
               

               
Cow position:
               
chr12:26268895-26268555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
248-571
               

               
Cow position:
               
chr12:27852328-27851995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 222
               

               
Conread position:
               
251-485
               

               
Cow position:
               
chr12:14522703-14522951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
261-461
               

               
Cow position:
               
chr12:35345316-35345108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
269-577
               

               
Cow position:
               
chr12:20217838-20218161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
68, 153
               

               
Conread position:
               
270-562
               

               
Cow position:
               
chr12:21723456-21723762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 176
               

               
Conread position:
               
270-562
               

               
Cow position:
               
chr12:39611061-39610760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
65, 204
               

               
Conread position:
               
304-562
               

               
Cow position:
               
chr12:41288683-41288951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
342-577
               

               
Cow position:
               
chr12:15259535-15259297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
343-562
               

               
Cow position:
               
chr12:27439257-27439036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
44, 109
               
Show alignments to all cow chromosomes.