Cow genome map

Conread name: rpigcb_11416.y1

Conread position: 1-261
Cow position: chr15:42943877-42943611 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-263
Cow position: chr15:4380593-4380322 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 105, 133

Conread position: 1-268
Cow position: chr15:32647089-32647366 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-271
Cow position: chr15:6762367-6762085 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-277
Cow position: chr15:2952419-2952133 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 160

Conread position: 1-277
Cow position: chr15:7058456-7058736 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 207
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 105, 145

Conread position: 1-289
Cow position: chr15:2898268-2897973 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 289

Conread position: 1-292
Cow position: chr15:4815289-4815586 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 105, 29

Conread position: 1-297
Cow position: chr15:36279036-36278729 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 133

Conread position: 1-302
Cow position: chr15:24090557-24090870 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-309
Cow position: chr15:29899067-29899380 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 126

Conread position: 1-310
Cow position: chr15:31585669-31585348 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-333
Cow position: chr15:2560148-2560492 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr15:2664117-2664459 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-333
Cow position: chr15:5197079-5197423 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 318

Conread position: 1-333
Cow position: chr15:6658387-6658040 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 1-333
Cow position: chr15:13286374-13286033 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 41

Conread position: 1-333
Cow position: chr15:13430554-13430893 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 92

Conread position: 1-333
Cow position: chr15:16801003-16801347 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr15:21940294-21939950 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr15:31270142-31269801 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 319

Conread position: 1-333
Cow position: chr15:32491159-32490817 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 144

Conread position: 1-339
Cow position: chr15:25553872-25554218 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 69

Conread position: 1-341
Cow position: chr15:4674062-4674414 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-365
Cow position: chr15:2021717-2021346 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 93

Conread position: 1-400
Cow position: chr15:21663013-21662593 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-403
Cow position: chr15:6043354-6043749 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 168

Conread position: 1-416
Cow position: chr15:6281381-6281808 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 105

Conread position: 1-417
Cow position: chr15:18229794-18230222 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-432
Cow position: chr15:33753551-33753098 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 159

Conread position: 1-451
Cow position: chr15:17267243-17267719 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-456
Cow position: chr15:18579455-18579930 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 162

Conread position: 1-471
Cow position: chr15:44785153-44784678 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 303
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 100, 63

Conread position: 1-479
Cow position: chr15:35404704-35405203 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 289

Conread position: 1-494
Cow position: chr15:11575282-11574774 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 174

Conread position: 1-495
Cow position: chr15:2080060-2080577 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 1-495
Cow position: chr15:17237158-17236645 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 350
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 86, 136

Conread position: 1-495
Cow position: chr15:30045127-30045654 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 168

Conread position: 1-495
Cow position: chr15:33527834-33527326 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 19

Conread position: 1-509
Cow position: chr15:2020012-2020512 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 162

Conread position: 1-514
Cow position: chr15:481313-481845 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-521
Cow position: chr15:26157739-26158274 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 129

Conread position: 1-528
Cow position: chr15:16784055-16784600 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 262

Conread position: 1-541
Cow position: chr15:4860220-4859653 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 51

Conread position: 1-547
Cow position: chr15:7848071-7847509 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 263

Conread position: 1-549
Cow position: chr15:6589203-6588633 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 190

Conread position: 1-549
Cow position: chr15:13683071-13683632 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 175

Conread position: 1-558
Cow position: chr15:5497789-5498364 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 50

Conread position: 1-562
Cow position: chr15:2617341-2616767 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 142

Conread position: 1-562
Cow position: chr15:4688761-4689342 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 123

Conread position: 1-562
Cow position: chr15:6164364-6163792 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 179

Conread position: 1-562
Cow position: chr15:7565732-7566314 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-562
Cow position: chr15:13546324-13545768 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 267

Conread position: 1-562
Cow position: chr15:21637000-21637587 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-562
Cow position: chr15:21806578-21807163 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-562
Cow position: chr15:26591617-26591036 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 422

Conread position: 1-562
Cow position: chr15:44073176-44073759 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 480

Conread position: 1-562
Cow position: chr15:45244323-45244902 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 403

Conread position: 1-562
Cow position: chr15:51910805-51910211 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 37

Conread position: 1-570
Cow position: chr15:2644617-2644024 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 297

Conread position: 1-570
Cow position: chr15:3721403-3720818 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-570
Cow position: chr15:4081731-4082308 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 43

Conread position: 1-570
Cow position: chr15:4140180-4139590 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 444

Conread position: 1-570
Cow position: chr15:6616527-6617122 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr15:6648680-6648089 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 1-570
Cow position: chr15:7267328-7267925 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 1-570
Cow position: chr15:7985701-7985103 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 1-570
Cow position: chr15:25069765-25069171 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr15:50308736-50308148 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 170

Conread position: 1-571
Cow position: chr15:67830-67242 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 167

Conread position: 1-571
Cow position: chr15:443058-442465 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 117

Conread position: 1-571
Cow position: chr15:1785495-1786084 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 484

Conread position: 1-571
Cow position: chr15:3008109-3007516 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 181

Conread position: 1-571
Cow position: chr15:4213898-4214485 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 228

Conread position: 1-571
Cow position: chr15:4219185-4218594 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 309

Conread position: 1-571
Cow position: chr15:4388476-4389072 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr15:4641932-4642524 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 172

Conread position: 1-571
Cow position: chr15:5243301-5242732 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 64

Conread position: 1-571
Cow position: chr15:6463802-6464386 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 145

Conread position: 1-571
Cow position: chr15:7271066-7271665 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 39

Conread position: 1-571
Cow position: chr15:7941155-7941741 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 103

Conread position: 1-571
Cow position: chr15:12417979-12417390 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 37

Conread position: 1-571
Cow position: chr15:13076248-13076850 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 1-571
Cow position: chr15:15344374-15343784 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 162

Conread position: 1-571
Cow position: chr15:17074633-17074038 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 485

Conread position: 1-571
Cow position: chr15:20413304-20413899 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 162

Conread position: 1-571
Cow position: chr15:28487399-28486818 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 96

Conread position: 1-571
Cow position: chr15:32714432-32715024 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 144

Conread position: 1-571
Cow position: chr15:34063680-34064265 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 178

Conread position: 1-571
Cow position: chr15:35750566-35749974 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 25

Conread position: 1-571
Cow position: chr15:36329731-36329135 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr15:38983390-38983999 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr15:42939645-42940233 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 48

Conread position: 1-571
Cow position: chr15:45292065-45292641 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 70

Conread position: 1-571
Cow position: chr15:48556449-48557044 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 65

Conread position: 1-573
Cow position: chr15:4829065-4829655 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 256

Conread position: 1-573
Cow position: chr15:6550885-6550287 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-573
Cow position: chr15:12442254-12442853 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chr15:16787901-16787314 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 53

Conread position: 1-573
Cow position: chr15:28235725-28236302 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 104

Conread position: 1-573
Cow position: chr15:44298130-44297553 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 25

Conread position: 1-577
Cow position: chr15:4727899-4728480 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 41

Conread position: 1-577
Cow position: chr15:8629039-8629636 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 63

Conread position: 1-577
Cow position: chr15:10477396-10476796 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 144

Conread position: 1-577
Cow position: chr15:11628132-11628728 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 74

Conread position: 1-577
Cow position: chr15:26932771-26933374 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 207

Conread position: 1-577
Cow position: chr15:33229322-33228727 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 145

Conread position: 1-577
Cow position: chr15:36423884-36423285 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 202

Conread position: 1-577
Cow position: chr15:40344521-40343926 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 481

Conread position: 1-577
Cow position: chr15:42532779-42533369 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 475

Conread position: 2-488
Cow position: chr15:52867357-52867867 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 102

Conread position: 4-330
Cow position: chr15:1298921-1298586 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-548
Cow position: chr15:32876764-32877303 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 78

Conread position: 4-549
Cow position: chr15:4788066-4787512 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 89

Conread position: 4-549
Cow position: chr15:19735067-19734498 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-559
Cow position: chr15:21607507-21608072 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 399

Conread position: 4-571
Cow position: chr15:26389231-26388645 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 296

Conread position: 4-571
Cow position: chr15:27747788-27747190 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-572
Cow position: chr15:5020106-5020688 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 48

Conread position: 4-572
Cow position: chr15:6065995-6065419 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 49

Conread position: 4-573
Cow position: chr15:23666762-23666167 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-573
Cow position: chr15:50344998-50344411 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 507

Conread position: 4-577
Cow position: chr15:36670908-36671487 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 132

Conread position: 5-333
Cow position: chr15:3792810-3793159 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 5-334
Cow position: chr15:16925962-16925630 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 222
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 177, 100

Conread position: 5-335
Cow position: chr15:4077396-4077058 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 158

Conread position: 5-339
Cow position: chr15:11291037-11290702 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 140

Conread position: 5-456
Cow position: chr15:36622929-36622464 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 286

Conread position: 5-538
Cow position: chr15:30726491-30725958 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 86

Conread position: 5-562
Cow position: chr15:7547602-7548156 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 45

Conread position: 5-562
Cow position: chr15:8029275-8028704 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 156

Conread position: 5-562
Cow position: chr15:24097336-24097887 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 21

Conread position: 5-571
Cow position: chr15:609385-608805 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 11

Conread position: 5-571
Cow position: chr15:24796599-24797152 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 140

Conread position: 5-571
Cow position: chr15:32065557-32064969 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 127

Conread position: 5-572
Cow position: chr15:7963302-7962726 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 199

Conread position: 5-573
Cow position: chr15:12439480-12440039 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 125

Conread position: 5-573
Cow position: chr15:18019651-18019067 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 125

Conread position: 5-573
Cow position: chr15:39091461-39090898 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 87

Conread position: 5-577
Cow position: chr15:4626685-4626097 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 50

Conread position: 6-577
Cow position: chr15:336425-337006 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 11

Conread position: 7-482
Cow position: chr15:33305051-33304563 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 60

Conread position: 7-571
Cow position: chr15:36940647-36940058 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 8-390
Cow position: chr15:7325651-7325259 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 263
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 155

Conread position: 8-458
Cow position: chr15:44364619-44364148 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 9-283
Cow position: chr15:49242579-49242292 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-322
Cow position: chr15:44378258-44378579 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 159

Conread position: 9-333
Cow position: chr15:9522463-9522126 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-333
Cow position: chr15:37373387-37373054 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 164

Conread position: 9-387
Cow position: chr15:17295737-17296134 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 273
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 97, 127

Conread position: 9-406
Cow position: chr15:36356328-36355915 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 61

Conread position: 9-494
Cow position: chr15:37631745-37632241 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 29

Conread position: 9-495
Cow position: chr15:4629499-4628994 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 10

Conread position: 9-507
Cow position: chr15:4895633-4895138 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 61

Conread position: 9-515
Cow position: chr15:16514931-16515469 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 385

Conread position: 9-539
Cow position: chr15:6330864-6331399 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 59

Conread position: 9-548
Cow position: chr15:22712467-22713024 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 84

Conread position: 9-549
Cow position: chr15:18265024-18264460 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-558
Cow position: chr15:47201831-47201252 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-570
Cow position: chr15:6758740-6758153 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-570
Cow position: chr15:7587044-7586464 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 181

Conread position: 9-570
Cow position: chr15:12858879-12859465 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 84

Conread position: 9-571
Cow position: chr15:29571-28984 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 9-571
Cow position: chr15:2015228-2015794 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 53

Conread position: 9-571
Cow position: chr15:2899521-2898931 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 476

Conread position: 9-571
Cow position: chr15:7841071-7841644 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 91

Conread position: 9-571
Cow position: chr15:25132694-25133287 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 201

Conread position: 9-571
Cow position: chr15:37394466-37395027 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 53

Conread position: 9-571
Cow position: chr15:50151437-50152025 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 159

Conread position: 9-577
Cow position: chr15:5983364-5983960 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-577
Cow position: chr15:7577903-7578489 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 137

Conread position: 10-484
Cow position: chr15:6488508-6489003 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 325
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 96, 7

Conread position: 10-571
Cow position: chr15:6805451-6806040 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 483

Conread position: 11-274
Cow position: chr15:24969209-24968951 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 83, 186

Conread position: 11-479
Cow position: chr15:9910362-9909871 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 11-562
Cow position: chr15:6120116-6120692 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 388

Conread position: 11-562
Cow position: chr15:14756930-14757497 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 11-571
Cow position: chr15:5640852-5640266 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 11-571
Cow position: chr15:18214310-18214893 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 162

Conread position: 12-329
Cow position: chr15:4654207-4654536 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 303

Conread position: 16-532
Cow position: chr15:37382845-37382303 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 17-330
Cow position: chr15:18085-18404 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 89, 58

Conread position: 17-420
Cow position: chr15:23774048-23774467 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 249

Conread position: 17-570
Cow position: chr15:35416341-35416912 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 70

Conread position: 17-576
Cow position: chr15:14573562-14572993 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 270

Conread position: 18-472
Cow position: chr15:32690186-32689711 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 323
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 17

Conread position: 18-554
Cow position: chr15:2924959-2925508 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 44

Conread position: 21-333
Cow position: chr15:42597503-42597179 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 25-473
Cow position: chr15:561482-561951 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 149

Conread position: 29-333
Cow position: chr15:10826201-10826507 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 111

Conread position: 32-571
Cow position: chr15:22760244-22759675 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 35-573
Cow position: chr15:21153058-21152494 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 38-358
Cow position: chr15:43266872-43267204 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 229

Conread position: 41-562
Cow position: chr15:2806484-2805959 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 14

Conread position: 41-577
Cow position: chr15:29341336-29340773 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 63

Conread position: 42-562
Cow position: chr15:14578633-14578107 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 150

Conread position: 46-573
Cow position: chr15:1775935-1776487 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 107

Conread position: 51-570
Cow position: chr15:2590182-2590716 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 84

Conread position: 52-329
Cow position: chr15:2592544-2592831 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 83

Conread position: 52-516
Cow position: chr15:22540057-22539572 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 87

Conread position: 55-482
Cow position: chr15:22162473-22162043 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 297
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 51, 88

Conread position: 55-562
Cow position: chr15:44260868-44260351 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 142

Conread position: 65-333
Cow position: chr15:21645028-21644754 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 203
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 41, 199

Conread position: 65-536
Cow position: chr15:4122577-4123071 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 65-546
Cow position: chr15:677854-678359 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 65-576
Cow position: chr15:28071639-28071107 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 66-562
Cow position: chr15:20348469-20347958 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 79

Conread position: 66-562
Cow position: chr15:23560829-23561334 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 71

Conread position: 66-577
Cow position: chr15:13388553-13388006 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 319

Conread position: 74-558
Cow position: chr15:29884509-29884012 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 86

Conread position: 76-571
Cow position: chr15:18661291-18661811 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 218

Conread position: 85-570
Cow position: chr15:2533544-2534055 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 85-571
Cow position: chr15:4769317-4769828 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 86-336
Cow position: chr15:26077548-26077800 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 127

Conread position: 88-387
Cow position: chr15:29273426-29273112 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 88-514
Cow position: chr15:6563709-6564158 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 88-558
Cow position: chr15:38684315-38683855 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 59

Conread position: 88-571
Cow position: chr15:5197771-5198296 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 231

Conread position: 88-577
Cow position: chr15:16740873-16741390 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 341
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 17, 322

Conread position: 93-570
Cow position: chr15:25463703-25463204 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 94-577
Cow position: chr15:19191393-19191883 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 122

Conread position: 95-571
Cow position: chr15:25165281-25164779 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 103-570
Cow position: chr15:4822235-4821747 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 56

Conread position: 106-337
Cow position: chr15:25436237-25435997 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 106-532
Cow position: chr15:30984408-30984845 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 305
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 102, 359

Conread position: 106-562
Cow position: chr15:22855719-22855243 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 106-570
Cow position: chr15:45944859-45944374 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 355

Conread position: 106-571
Cow position: chr15:4712744-4713233 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 159

Conread position: 106-571
Cow position: chr15:17193726-17193233 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 106-571
Cow position: chr15:17398808-17399295 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 319
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 88, 357

Conread position: 107-531
Cow position: chr15:18757982-18757548 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 273
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 24

Conread position: 107-562
Cow position: chr15:19859683-19859221 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 289
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 177

Conread position: 107-573
Cow position: chr15:793894-794381 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 183

Conread position: 110-573
Cow position: chr15:50142100-50142586 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 115-333
Cow position: chr15:35591-35812 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 42

Conread position: 116-571
Cow position: chr15:42727230-42727698 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 60

Conread position: 118-562
Cow position: chr15:7574651-7575116 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 13

Conread position: 122-573
Cow position: chr15:34141126-34140662 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 39

Conread position: 124-549
Cow position: chr15:21915961-21916381 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 292
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 97, 46

Conread position: 125-423
Cow position: chr15:21452993-21453309 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 166

Conread position: 128-562
Cow position: chr15:31768690-31768237 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 85

Conread position: 133-570
Cow position: chr15:7512492-7512032 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 134-554
Cow position: chr15:17215115-17214697 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 15

Conread position: 137-573
Cow position: chr15:41029451-41028992 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 143-476
Cow position: chr15:22533280-22532926 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 236
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 150-571
Cow position: chr15:20404802-20404358 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 151-562
Cow position: chr15:22096185-22095761 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 152

Conread position: 152-454
Cow position: chr15:20647047-20647370 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 152-573
Cow position: chr15:45210895-45211339 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 161-380
Cow position: chr15:29811852-29811618 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 165-447
Cow position: chr15:4874975-4874683 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 141

Conread position: 171-571
Cow position: chr15:17773447-17773024 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 287
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 193-451
Cow position: chr15:6537930-6537662 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 64

Conread position: 198-571
Cow position: chr15:20458279-20458658 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 276
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 79, 32

Conread position: 199-552
Cow position: chr15:22752484-22752125 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 21

Conread position: 199-562
Cow position: chr15:16967624-16967993 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 253
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 134, 22

Conread position: 199-571
Cow position: chr15:8576081-8576477 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 274
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 25, 87

Conread position: 201-570
Cow position: chr15:52208559-52208173 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 87

Conread position: 212-479
Cow position: chr15:30811576-30811852 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 111

Conread position: 212-571
Cow position: chr15:37744011-37744378 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 212-573
Cow position: chr15:2800980-2800609 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 17, 150

Conread position: 215-431
Cow position: chr15:33455323-33455545 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 67

Conread position: 215-572
Cow position: chr15:8937366-8937730 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 9

Conread position: 219-425
Cow position: chr15:7981186-7980985 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 122, 150

Conread position: 220-541
Cow position: chr15:42101826-42102139 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 221-339
Cow position: chr15:5460710-5460828 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 91
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 221-571
Cow position: chr15:2796306-2796663 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 241

Conread position: 221-577
Cow position: chr15:10838930-10839291 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 8

Conread position: 224-435
Cow position: chr15:13169-12946 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 224-474
Cow position: chr15:33335428-33335690 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 111, 0

Conread position: 224-519
Cow position: chr15:47842054-47842358 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 107, 70

Conread position: 224-525
Cow position: chr15:51723360-51723676 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 35, 0

Conread position: 224-526
Cow position: chr15:51682855-51683157 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 28

Conread position: 224-539
Cow position: chr15:21688156-21687830 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 214
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 203

Conread position: 224-558
Cow position: chr15:19215114-19214776 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 68

Conread position: 224-558
Cow position: chr15:21911333-21910988 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 57

Conread position: 224-559
Cow position: chr15:7953015-7953358 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 303

Conread position: 224-562
Cow position: chr15:41793366-41793016 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 249

Conread position: 224-569
Cow position: chr15:44164574-44164932 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 340

Conread position: 224-570
Cow position: chr15:6158148-6158504 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 71, 58

Conread position: 224-570
Cow position: chr15:9620437-9620076 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position: chr15:11596418-11596058 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position: chr15:44576362-44576722 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-573
Cow position: chr15:20944335-20944699 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 225-415
Cow position: chr15:1838050-1837860 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 159, 117

Conread position: 229-576
Cow position: chr15:40064650-40065009 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 106, 27

Conread position: 231-576
Cow position: chr15:12366332-12366679 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 229
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 107, 25

Conread position: 237-500
Cow position: chr15:4730610-4730881 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 91

Conread position: 240-572
Cow position: chr15:16926888-16927227 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 40

Conread position: 246-478
Cow position: chr15:18061208-18060968 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 222

Conread position: 260-546
Cow position: chr15:19256739-19256441 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 71, 202

Conread position: 282-577
Cow position: chr15:21840030-21839735 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 59

Conread position: 341-573
Cow position: chr15:37646323-37646085 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 107

Show alignments to all cow chromosomes.