Cow genome map

Conread name: rpigcb_11416.y1

Conread position: 1-271
Cow position: chr16:27710818-27710542 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 102, 51

Conread position: 1-273
Cow position: chr16:37146358-37146638 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-288
Cow position: chr16:23876149-23875859 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 193, 74

Conread position: 1-300
Cow position: chr16:34532675-34532982 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-300
Cow position: chr16:37486875-37486563 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 86

Conread position: 1-303
Cow position: chr16:26388784-26388473 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 181

Conread position: 1-322
Cow position: chr16:54179974-54179650 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 240
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 105, 33

Conread position: 1-330
Cow position: chr16:37053419-37053760 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr16:658342-658675 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 287

Conread position: 1-333
Cow position: chr16:21189639-21189983 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr16:45559675-45560018 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 252
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 151

Conread position: 1-333
Cow position: chr16:54286926-54287266 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 233
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 174, 103

Conread position: 1-334
Cow position: chr16:12244660-12244319 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 264

Conread position: 1-338
Cow position: chr16:3819746-3820102 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 92

Conread position: 1-395
Cow position: chr16:37455096-37454691 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 68

Conread position: 1-406
Cow position: chr16:32326245-32326672 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 162

Conread position: 1-408
Cow position: chr16:45755231-45754823 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 124

Conread position: 1-417
Cow position: chr16:53612186-53612622 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 33

Conread position: 1-454
Cow position: chr16:23065387-23065857 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 55

Conread position: 1-483
Cow position: chr16:14352300-14351796 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 158

Conread position: 1-487
Cow position: chr16:4973144-4972633 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 267

Conread position: 1-495
Cow position: chr16:2408513-2407993 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-498
Cow position: chr16:10859944-10859432 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 39

Conread position: 1-512
Cow position: chr16:19671853-19671364 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 340
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 105, 54

Conread position: 1-525
Cow position: chr16:40878973-40879521 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-528
Cow position: chr16:55681895-55682441 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 1-531
Cow position: chr16:23249588-23249020 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 1-536
Cow position: chr16:14100233-14100788 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-538
Cow position: chr16:599805-600362 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 175

Conread position: 1-539
Cow position: chr16:27731000-27730439 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 547

Conread position: 1-543
Cow position: chr16:7303137-7303704 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-543
Cow position: chr16:45655208-45654628 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 22

Conread position: 1-549
Cow position: chr16:4426472-4427043 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-553
Cow position: chr16:22799323-22798747 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-558
Cow position: chr16:44256742-44256159 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 91

Conread position: 1-559
Cow position: chr16:43563014-43562432 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 575

Conread position: 1-562
Cow position: chr16:2233345-2232761 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 539

Conread position: 1-562
Cow position: chr16:21017940-21018524 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 494

Conread position: 1-562
Cow position: chr16:25173627-25174200 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 144

Conread position: 1-562
Cow position: chr16:37058628-37058026 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 132

Conread position: 1-570
Cow position: chr16:6677101-6677693 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 445

Conread position: 1-570
Cow position: chr16:13722209-13721612 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 1-570
Cow position: chr16:15311664-15312257 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 130

Conread position: 1-570
Cow position: chr16:19081433-19082022 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 314

Conread position: 1-570
Cow position: chr16:24407291-24407888 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr16:24615684-24615099 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 237

Conread position: 1-570
Cow position: chr16:42210877-42211472 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr16:45465536-45464944 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr16:1734120-1734713 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 84

Conread position: 1-571
Cow position: chr16:2480763-2480182 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 17

Conread position: 1-571
Cow position: chr16:3148649-3148064 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 103

Conread position: 1-571
Cow position: chr16:4343522-4342942 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 92

Conread position: 1-571
Cow position: chr16:5435206-5435802 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr16:5525723-5525124 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 499

Conread position: 1-571
Cow position: chr16:8813721-8813128 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 84

Conread position: 1-571
Cow position: chr16:10373053-10372459 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr16:10440620-10441215 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 292

Conread position: 1-571
Cow position: chr16:11633463-11632867 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr16:12535557-12534991 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 74

Conread position: 1-571
Cow position: chr16:12651309-12651897 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 349

Conread position: 1-571
Cow position: chr16:13422541-13421949 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 108

Conread position: 1-571
Cow position: chr16:14039807-14040402 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr16:15187449-15188032 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 162

Conread position: 1-571
Cow position: chr16:15349766-15349185 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 173

Conread position: 1-571
Cow position: chr16:15494839-15495427 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 162

Conread position: 1-571
Cow position: chr16:15904823-15904244 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 183

Conread position: 1-571
Cow position: chr16:15979997-15979401 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr16:17141787-17142376 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 71

Conread position: 1-571
Cow position: chr16:18651201-18650607 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 173

Conread position: 1-571
Cow position: chr16:18975250-18975845 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 1-571
Cow position: chr16:24210017-24209421 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr16:25344359-25344952 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 483

Conread position: 1-571
Cow position: chr16:25444259-25444853 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 92

Conread position: 1-571
Cow position: chr16:26627133-26627728 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr16:28193919-28193324 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 281

Conread position: 1-571
Cow position: chr16:28468742-28468146 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr16:29036258-29036837 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 163

Conread position: 1-571
Cow position: chr16:34482537-34483124 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 24

Conread position: 1-571
Cow position: chr16:37478479-37477884 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 121

Conread position: 1-571
Cow position: chr16:46102236-46101642 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 291

Conread position: 1-571
Cow position: chr16:48411016-48411621 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr16:50713058-50712462 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-571
Cow position: chr16:51087165-51087759 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 156

Conread position: 1-571
Cow position: chr16:52526614-52527205 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 159

Conread position: 1-571
Cow position: chr16:56913851-56913264 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 34

Conread position: 1-572
Cow position: chr16:14662727-14662145 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 290

Conread position: 1-572
Cow position: chr16:52856460-52855887 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 165

Conread position: 1-573
Cow position: chr16:4756406-4756987 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 142

Conread position: 1-573
Cow position: chr16:5416886-5416295 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 22

Conread position: 1-573
Cow position: chr16:12485919-12485321 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chr16:20278221-20278819 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chr16:25074974-25075572 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chr16:49253856-49253289 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 17

Conread position: 1-577
Cow position: chr16:15804687-15805285 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 171

Conread position: 1-577
Cow position: chr16:27593441-27592841 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-577
Cow position: chr16:39615605-39616198 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 203

Conread position: 3-570
Cow position: chr16:25879699-25880291 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 537

Conread position: 4-337
Cow position: chr16:55867727-55868049 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 79

Conread position: 4-339
Cow position: chr16:3349399-3349740 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 101

Conread position: 4-339
Cow position: chr16:39475213-39475565 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 140

Conread position: 4-406
Cow position: chr16:45704408-45703993 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 39

Conread position: 4-407
Cow position: chr16:49230897-49230475 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 78

Conread position: 4-475
Cow position: chr16:4398633-4399119 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 376

Conread position: 4-492
Cow position: chr16:16267513-16267023 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 330
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 119, 102

Conread position: 4-534
Cow position: chr16:41624296-41623773 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 230

Conread position: 4-545
Cow position: chr16:19798308-19797743 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 137

Conread position: 4-555
Cow position: chr16:42074514-42073942 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 467

Conread position: 4-562
Cow position: chr16:13042625-13043194 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 156

Conread position: 4-562
Cow position: chr16:18951620-18951043 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 358
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 103, 7

Conread position: 4-562
Cow position: chr16:26500047-26500596 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 156

Conread position: 4-570
Cow position: chr16:5894823-5895406 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 88

Conread position: 4-571
Cow position: chr16:15812452-15813059 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 264

Conread position: 4-571
Cow position: chr16:26666088-26666687 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 543

Conread position: 4-571
Cow position: chr16:47403766-47404357 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 170

Conread position: 4-577
Cow position: chr16:11054373-11054950 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 77

Conread position: 4-577
Cow position: chr16:19722339-19722908 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 48

Conread position: 5-333
Cow position: chr16:41805056-41804732 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 35, 100

Conread position: 5-342
Cow position: chr16:14569811-14569465 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 50

Conread position: 5-398
Cow position: chr16:37925590-37925187 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 65

Conread position: 5-459
Cow position: chr16:25964296-25964761 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 123

Conread position: 5-461
Cow position: chr16:41575639-41576107 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 158

Conread position: 5-528
Cow position: chr16:23028710-23029258 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 350
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 71, 540

Conread position: 5-559
Cow position: chr16:43770766-43770186 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 202

Conread position: 5-562
Cow position: chr16:45608800-45609374 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 5-562
Cow position: chr16:47367382-47367935 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 100

Conread position: 5-571
Cow position: chr16:5665483-5666075 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 422

Conread position: 5-571
Cow position: chr16:5756324-5756912 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 76

Conread position: 5-571
Cow position: chr16:20204389-20204957 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 290

Conread position: 5-571
Cow position: chr16:23533614-23533024 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 263

Conread position: 5-577
Cow position: chr16:28022662-28022087 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 44

Conread position: 6-406
Cow position: chr16:49219563-49219147 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 295

Conread position: 7-571
Cow position: chr16:16150360-16149771 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 86

Conread position: 8-473
Cow position: chr16:12736667-12737159 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 8-562
Cow position: chr16:25892900-25893469 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 82

Conread position: 8-571
Cow position: chr16:701649-702226 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 285

Conread position: 9-330
Cow position: chr16:7674072-7673739 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-333
Cow position: chr16:31586307-31585977 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 40

Conread position: 9-340
Cow position: chr16:13602249-13601910 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 25

Conread position: 9-498
Cow position: chr16:26990551-26990039 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 433

Conread position: 9-536
Cow position: chr16:12160891-12160344 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 148

Conread position: 9-550
Cow position: chr16:417284-417847 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 514

Conread position: 9-558
Cow position: chr16:40923-41499 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-558
Cow position: chr16:37671108-37670547 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 206

Conread position: 9-562
Cow position: chr16:41033689-41034267 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-571
Cow position: chr16:839670-840247 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 154

Conread position: 9-571
Cow position: chr16:1563999-1563410 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-571
Cow position: chr16:3769621-3769031 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 79

Conread position: 9-571
Cow position: chr16:28206722-28206134 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 310

Conread position: 9-571
Cow position: chr16:40293781-40293193 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-571
Cow position: chr16:46554811-46555399 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-573
Cow position: chr16:45533851-45534432 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 394

Conread position: 9-573
Cow position: chr16:47772650-47773237 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 76

Conread position: 9-577
Cow position: chr16:30052338-30052916 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 397

Conread position: 10-337
Cow position: chr16:20201464-20201802 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 98

Conread position: 10-573
Cow position: chr16:47018358-47017789 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 34

Conread position: 11-509
Cow position: chr16:6706324-6705813 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 281

Conread position: 11-540
Cow position: chr16:43554-44076 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 19

Conread position: 11-550
Cow position: chr16:49743132-49742575 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 106

Conread position: 11-558
Cow position: chr16:16095590-16096159 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 545

Conread position: 11-571
Cow position: chr16:16539800-16540374 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 284

Conread position: 13-562
Cow position: chr16:41036633-41036074 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 390

Conread position: 17-332
Cow position: chr16:5763243-5763563 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 130

Conread position: 17-570
Cow position: chr16:49780553-49779974 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 17-571
Cow position: chr16:31425447-31426031 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 131

Conread position: 21-277
Cow position: chr16:46365397-46365133 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 85, 31

Conread position: 21-571
Cow position: chr16:54323017-54322433 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 169

Conread position: 22-563
Cow position: chr16:12175666-12175098 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 352
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 151

Conread position: 25-562
Cow position: chr16:3332313-3332855 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 30

Conread position: 26-562
Cow position: chr16:52589200-52588654 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 360
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 63, 38

Conread position: 27-333
Cow position: chr16:23711880-23711562 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 27-509
Cow position: chr16:28268308-28267805 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 364

Conread position: 28-571
Cow position: chr16:18745622-18745060 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 210

Conread position: 34-446
Cow position: chr16:20377867-20378295 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 140

Conread position: 34-555
Cow position: chr16:2304774-2305318 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 460

Conread position: 37-562
Cow position: chr16:7457565-7457021 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 253

Conread position: 46-562
Cow position: chr16:41834307-41834831 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 86

Conread position: 48-562
Cow position: chr16:28473506-28472986 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 347
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 51, 189

Conread position: 50-484
Cow position: chr16:25935173-25935631 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 247

Conread position: 52-506
Cow position: chr16:18425837-18426301 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 33

Conread position: 52-562
Cow position: chr16:15485223-15485755 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 155

Conread position: 52-570
Cow position: chr16:2960111-2960655 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 54-570
Cow position: chr16:18212761-18212219 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 54-573
Cow position: chr16:27012836-27013369 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 449

Conread position: 58-573
Cow position: chr16:24988066-24987524 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 65-577
Cow position: chr16:5833246-5833802 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 367
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 109

Conread position: 66-495
Cow position: chr16:51401100-51400659 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 20

Conread position: 70-571
Cow position: chr16:4721934-4722455 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 162

Conread position: 74-525
Cow position: chr16:25168691-25169154 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 94

Conread position: 74-570
Cow position: chr16:5488325-5488847 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 74-573
Cow position: chr16:49142619-49142091 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 393

Conread position: 75-572
Cow position: chr16:29050099-29050619 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 86-384
Cow position: chr16:29093594-29093904 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 98, 18

Conread position: 87-570
Cow position: chr16:23809988-23810488 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 403

Conread position: 88-558
Cow position: chr16:6390160-6389694 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 15

Conread position: 93-563
Cow position: chr16:7385238-7385732 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 93-577
Cow position: chr16:29512249-29512753 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 68

Conread position: 100-283
Cow position: chr16:17111801-17111993 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 106-280
Cow position: chr16:20968458-20968280 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 118, 81

Conread position: 106-333
Cow position: chr16:16681106-16680870 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 88, 0

Conread position: 106-495
Cow position: chr16:24637025-24636618 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 259

Conread position: 106-563
Cow position: chr16:42733796-42733324 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 103

Conread position: 106-571
Cow position: chr16:39033844-39033375 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 44

Conread position: 106-571
Cow position: chr16:49516295-49515806 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 60

Conread position: 106-571
Cow position: chr16:50190625-50190145 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 184

Conread position: 106-571
Cow position: chr16:54231853-54231376 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 179

Conread position: 106-573
Cow position: chr16:14029652-14029177 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 23

Conread position: 106-573
Cow position: chr16:53510035-53509541 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 51

Conread position: 108-562
Cow position: chr16:46572084-46571613 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 318
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 28, 6

Conread position: 109-445
Cow position: chr16:4367117-4367462 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 77, 62

Conread position: 110-330
Cow position: chr16:15409596-15409363 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 82, 61

Conread position: 115-549
Cow position: chr16:22320773-22320336 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 80

Conread position: 118-333
Cow position: chr16:48371602-48371378 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 120-546
Cow position: chr16:4079454-4079018 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 298
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 71, 42

Conread position: 121-571
Cow position: chr16:9785812-9786294 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 322

Conread position: 131-573
Cow position: chr16:24147171-24147619 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 364

Conread position: 131-574
Cow position: chr16:29539293-29538835 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 133-459
Cow position: chr16:26975685-26975341 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 63, 180

Conread position: 134-536
Cow position: chr16:54703014-54703420 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 270
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 209

Conread position: 134-571
Cow position: chr16:27818418-27817968 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 286
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 56, 94

Conread position: 143-573
Cow position: chr16:44675879-44676333 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 144-570
Cow position: chr16:5350981-5350532 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 148-562
Cow position: chr16:49577522-49577940 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 72

Conread position: 155-577
Cow position: chr16:48341669-48341225 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 114

Conread position: 156-444
Cow position: chr16:37388258-37387954 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 205
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 15

Conread position: 159-571
Cow position: chr16:23773133-23772698 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 160-571
Cow position: chr16:51640792-51641224 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 105

Conread position: 162-571
Cow position: chr16:42745927-42745507 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 93

Conread position: 164-540
Cow position: chr16:23403361-23403757 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 171-529
Cow position: chr16:48010835-48010479 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 6

Conread position: 171-570
Cow position: chr16:32118133-32118553 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 120

Conread position: 172-558
Cow position: chr16:15369551-15369953 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 179-571
Cow position: chr16:14570164-14570552 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 44

Conread position: 187-571
Cow position: chr16:4711947-4712346 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 264
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 24, 43

Conread position: 192-495
Cow position: chr16:7541063-7541379 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 38, 291

Conread position: 196-572
Cow position: chr16:54228701-54228305 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 72

Conread position: 208-571
Cow position: chr16:20475304-20475680 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 85, 7

Conread position: 215-573
Cow position: chr16:7043326-7042953 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 249
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 0

Conread position: 218-553
Cow position: chr16:48630842-48631179 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 106, 28

Conread position: 220-577
Cow position: chr16:19409744-19409372 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 221-441
Cow position: chr16:16543067-16543288 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 44, 63

Conread position: 221-549
Cow position: chr16:8368113-8367774 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 109, 92

Conread position: 221-553
Cow position: chr16:19327231-19327564 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 217
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 106, 117

Conread position: 221-562
Cow position: chr16:23059475-23059125 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 239
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 8, 198

Conread position: 221-571
Cow position: chr16:19062448-19062811 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 252

Conread position: 224-341
Cow position: chr16:5352580-5352468 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 224-496
Cow position: chr16:34833566-34833289 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 111, 167

Conread position: 224-549
Cow position: chr16:45798963-45799300 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 235

Conread position: 224-558
Cow position: chr16:7504055-7504394 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 67

Conread position: 224-562
Cow position: chr16:5747487-5747142 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 238
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 22, 16

Conread position: 224-562
Cow position: chr16:7566683-7567031 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 108, 308

Conread position: 224-570
Cow position: chr16:8883549-8883909 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position: chr16:20502651-20503007 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 209

Conread position: 224-570
Cow position: chr16:26658581-26658940 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 111, 326

Conread position: 224-570
Cow position: chr16:52952624-52952264 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-571
Cow position: chr16:3011734-3012091 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 224-571
Cow position: chr16:44450559-44450920 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-572
Cow position: chr16:48955709-48956065 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 261
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 61, 175

Conread position: 224-573
Cow position: chr16:49096580-49096943 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-577
Cow position: chr16:21090708-21091073 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 242
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 182

Conread position: 224-577
Cow position: chr16:42079734-42079386 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 39

Conread position: 224-577
Cow position: chr16:48495302-48494936 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 103

Conread position: 226-548
Cow position: chr16:20124503-20124836 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 89

Conread position: 226-557
Cow position: chr16:46254615-46254293 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 88, 10

Conread position: 227-432
Cow position: chr16:42254694-42254482 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 114, 54

Conread position: 228-577
Cow position: chr16:9417483-9417839 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 252

Conread position: 229-526
Cow position: chr16:5655829-5656129 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 114, 86

Conread position: 233-562
Cow position: chr16:49510193-49509852 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 266

Conread position: 233-570
Cow position: chr16:44973122-44972770 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 323

Conread position: 234-558
Cow position: chr16:14757814-14758149 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 20

Conread position: 234-573
Cow position: chr16:6380012-6379660 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 70

Conread position: 238-577
Cow position: chr16:18948718-18949058 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 37

Conread position: 239-573
Cow position: chr16:825104-825449 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 234
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 230

Conread position: 241-577
Cow position: chr16:53622209-53621859 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 102, 63

Conread position: 256-548
Cow position: chr16:4080207-4080496 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 129, 68

Conread position: 256-570
Cow position: chr16:7717853-7718183 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 256-577
Cow position: chr16:47627068-47626741 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 81, 26

Conread position: 259-570
Cow position: chr16:24753276-24752951 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 76, 0

Conread position: 269-577
Cow position: chr16:30638471-30638782 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 73, 24

Conread position: 294-483
Cow position: chr16:28112836-28112641 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 99

Conread position: 297-562
Cow position: chr16:56149472-56149744 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 266

Conread position: 307-577
Cow position: chr16:43813255-43813531 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 234

Conread position: 310-577
Cow position: chr16:32838368-32838089 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 207
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 133

Conread position: 443-577
Cow position: chr16:42752194-42752328 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.