Cow genome map

Conread name: rpigcb_11416.y1

Conread position: 1-234
Cow position:
Alignm length: 237
Alignm identity: 176
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 105, 0

Conread position: 1-280
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 144

Conread position: 1-329
Cow position:
Alignm length: 341
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 173

Conread position: 1-330
Cow position:
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 50

Conread position: 1-333
Cow position:
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-339
Cow position:
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 96

Conread position: 1-379
Cow position:
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 116

Conread position: 1-453
Cow position:
Alignm length: 469
Alignm identity: 314
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 22

Conread position: 1-454
Cow position:
Alignm length: 471
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-454
Cow position:
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 39

Conread position: 1-476
Cow position:
Alignm length: 500
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-480
Cow position:
Alignm length: 504
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-484
Cow position:
Alignm length: 504
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-495
Cow position:
Alignm length: 519
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 462

Conread position: 1-495
Cow position:
Alignm length: 526
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 38

Conread position: 1-498
Cow position:
Alignm length: 523
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 159

Conread position: 1-501
Cow position:
Alignm length: 520
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 198

Conread position: 1-537
Cow position:
Alignm length: 561
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-543
Cow position:
Alignm length: 561
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 238

Conread position: 1-548
Cow position:
Alignm length: 572
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-553
Cow position:
Alignm length: 577
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-558
Cow position:
Alignm length: 584
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 33

Conread position: 1-562
Cow position:
Alignm length: 584
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 103

Conread position: 1-567
Cow position:
Alignm length: 591
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position:
Alignm length: 589
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 167

Conread position: 1-570
Cow position:
Alignm length: 591
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 295

Conread position: 1-570
Cow position:
Alignm length: 596
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 444

Conread position: 1-570
Cow position:
Alignm length: 596
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 78

Conread position: 1-571
Cow position:
Alignm length: 600
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 18

Conread position: 1-571
Cow position:
Alignm length: 606
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 490

Conread position: 1-571
Cow position:
Alignm length: 593
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 479

Conread position: 1-571
Cow position:
Alignm length: 598
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 83

Conread position: 1-571
Cow position:
Alignm length: 578
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 157

Conread position: 1-571
Cow position:
Alignm length: 593
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 132

Conread position: 1-571
Cow position:
Alignm length: 591
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 179

Conread position: 1-571
Cow position:
Alignm length: 597
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position:
Alignm length: 597
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 156

Conread position: 1-571
Cow position:
Alignm length: 597
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 73

Conread position: 1-571
Cow position:
Alignm length: 602
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 92

Conread position: 1-571
Cow position:
Alignm length: 603
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 520

Conread position: 1-571
Cow position:
Alignm length: 595
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position:
Alignm length: 600
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 413

Conread position: 1-573
Cow position:
Alignm length: 593
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 44

Conread position: 1-573
Cow position:
Alignm length: 599
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-577
Cow position:
Alignm length: 605
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 173

Conread position: 1-577
Cow position:
Alignm length: 611
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 164

Conread position: 1-577
Cow position:
Alignm length: 596
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 69

Conread position: 2-545
Cow position:
Alignm length: 572
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 3-577
Cow position:
Alignm length: 599
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 4-322
Cow position:
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 209

Conread position: 4-341
Cow position:
Alignm length: 351
Alignm identity: 246
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 101, 62

Conread position: 4-459
Cow position:
Alignm length: 482
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-546
Cow position:
Alignm length: 569
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 290

Conread position: 4-570
Cow position:
Alignm length: 593
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 538

Conread position: 4-570
Cow position:
Alignm length: 593
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-571
Cow position:
Alignm length: 591
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 170

Conread position: 4-571
Cow position:
Alignm length: 598
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 17

Conread position: 4-571
Cow position:
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 156

Conread position: 4-571
Cow position:
Alignm length: 595
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 32

Conread position: 4-571
Cow position:
Alignm length: 590
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 299

Conread position: 5-333
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 5-382
Cow position:
Alignm length: 392
Alignm identity: 264
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 98, 165

Conread position: 5-552
Cow position:
Alignm length: 565
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 89

Conread position: 5-573
Cow position:
Alignm length: 590
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 99

Conread position: 5-577
Cow position:
Alignm length: 588
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 263

Conread position: 6-416
Cow position:
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 98

Conread position: 6-571
Cow position:
Alignm length: 605
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 141

Conread position: 6-572
Cow position:
Alignm length: 610
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 114

Conread position: 6-577
Cow position:
Alignm length: 586
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 49

Conread position: 7-524
Cow position:
Alignm length: 545
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 100

Conread position: 9-274
Cow position:
Alignm length: 275
Alignm identity: 196
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 93, 0

Conread position: 9-505
Cow position:
Alignm length: 508
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 94

Conread position: 9-558
Cow position:
Alignm length: 588
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 91

Conread position: 9-571
Cow position:
Alignm length: 588
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 453

Conread position: 9-571
Cow position:
Alignm length: 586
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 502

Conread position: 9-571
Cow position:
Alignm length: 582
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 95

Conread position: 9-573
Cow position:
Alignm length: 586
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 72

Conread position: 9-577
Cow position:
Alignm length: 593
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 124

Conread position: 10-418
Cow position:
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 220

Conread position: 14-319
Cow position:
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 17-340
Cow position:
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 35

Conread position: 17-558
Cow position:
Alignm length: 561
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 67

Conread position: 25-322
Cow position:
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 26-571
Cow position:
Alignm length: 575
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 121

Conread position: 28-562
Cow position:
Alignm length: 563
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 524

Conread position: 29-571
Cow position:
Alignm length: 557
Alignm identity: 230
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 285, 327

Conread position: 35-467
Cow position:
Alignm length: 458
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 69

Conread position: 37-576
Cow position:
Alignm length: 567
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 39

Conread position: 39-576
Cow position:
Alignm length: 560
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 42-553
Cow position:
Alignm length: 537
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 62

Conread position: 44-571
Cow position:
Alignm length: 559
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 52-335
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 134, 52

Conread position: 55-548
Cow position:
Alignm length: 511
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 162

Conread position: 55-573
Cow position:
Alignm length: 545
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 112

Conread position: 62-577
Cow position:
Alignm length: 555
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 65-570
Cow position:
Alignm length: 532
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 381

Conread position: 66-562
Cow position:
Alignm length: 525
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 73-570
Cow position:
Alignm length: 521
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 72

Conread position: 74-316
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 74-571
Cow position:
Alignm length: 524
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 82

Conread position: 85-337
Cow position:
Alignm length: 260
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 178

Conread position: 85-341
Cow position:
Alignm length: 269
Alignm identity: 180
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 206

Conread position: 85-577
Cow position:
Alignm length: 522
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 208

Conread position: 88-571
Cow position:
Alignm length: 510
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 88-571
Cow position:
Alignm length: 510
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 476

Conread position: 100-335
Cow position:
Alignm length: 245
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 15

Conread position: 106-451
Cow position:
Alignm length: 368
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 173

Conread position: 106-577
Cow position:
Alignm length: 496
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 420

Conread position: 107-554
Cow position:
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 466

Conread position: 112-547
Cow position:
Alignm length: 469
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 373

Conread position: 113-570
Cow position:
Alignm length: 481
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 118-506
Cow position:
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 124-333
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 70, 0

Conread position: 130-558
Cow position:
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 383

Conread position: 132-511
Cow position:
Alignm length: 397
Alignm identity: 270
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 273

Conread position: 132-573
Cow position:
Alignm length: 460
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 133-577
Cow position:
Alignm length: 450
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 98

Conread position: 144-571
Cow position:
Alignm length: 447
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 147

Conread position: 148-333
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 149-339
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 149-577
Cow position:
Alignm length: 449
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 291

Conread position: 162-571
Cow position:
Alignm length: 434
Alignm identity: 296
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 32, 281

Conread position: 166-571
Cow position:
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 169-571
Cow position:
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 13

Conread position: 172-573
Cow position:
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 121

Conread position: 174-571
Cow position:
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 17

Conread position: 176-572
Cow position:
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 79

Conread position: 199-525
Cow position:
Alignm length: 346
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 25, 0

Conread position: 204-577
Cow position:
Alignm length: 385
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 10

Conread position: 214-562
Cow position:
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 10

Conread position: 221-541
Cow position:
Alignm length: 333
Alignm identity: 214
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 120, 34

Conread position: 221-569
Cow position:
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 221-573
Cow position:
Alignm length: 370
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 21

Conread position: 224-418
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 55

Conread position: 224-558
Cow position:
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 307

Conread position: 224-562
Cow position:
Alignm length: 349
Alignm identity: 241
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 76, 68

Conread position: 224-570
Cow position:
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-573
Cow position:
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 208

Conread position: 226-577
Cow position:
Alignm length: 374
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 206

Conread position: 235-573
Cow position:
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 240-552
Cow position:
Alignm length: 322
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 66

Conread position: 240-577
Cow position:
Alignm length: 354
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 180

Conread position: 258-569
Cow position:
Alignm length: 323
Alignm identity: 216
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 152

Conread position: 263-573
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 72, 146

Conread position: 266-571
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 69, 0

Conread position: 287-535
Cow position:
Alignm length: 256
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 148

Conread position: 290-562
Cow position:
Alignm length: 282
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 113

Conread position: 294-572
Cow position:
Alignm length: 287
Alignm identity: 201
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 49, 102

Show alignments to all cow chromosomes.