Cow genome map
| Conread name: | rpigcb_11416.y1 |
| Conread position: | 1-283 |
| Cow position: | chr25:35571673-35571966 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 92 |
| Conread position: | 1-292 |
| Cow position: | chr25:11896471-11896773 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 281 |
| Conread position: | 1-333 |
| Cow position: | chr25:20633620-20633957 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 103 |
| Conread position: | 1-333 |
| Cow position: | chr25:31073743-31073399 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-333 |
| Cow position: | chr25:32577809-32577465 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-394 |
| Cow position: | chr25:17561901-17562304 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 158 |
| Conread position: | 1-401 |
| Cow position: | chr25:23361332-23361758 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 300 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 1-406 |
| Cow position: | chr25:33574873-33574460 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 19 |
| Conread position: | 1-435 |
| Cow position: | chr25:393123-393571 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 57, 119 |
| Conread position: | 1-454 |
| Cow position: | chr25:27019384-27018907 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 173 |
| Conread position: | 1-456 |
| Cow position: | chr25:7223578-7223100 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 72 |
| Conread position: | 1-505 |
| Cow position: | chr25:26706029-26705501 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-537 |
| Cow position: | chr25:13430254-13429705 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 69 |
| Conread position: | 1-549 |
| Cow position: | chr25:33688361-33687784 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 47 |
| Conread position: | 1-549 |
| Cow position: | chr25:35040030-35039463 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 120 |
| Conread position: | 1-558 |
| Cow position: | chr25:9395268-9395846 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 1-559 |
| Cow position: | chr25:11955684-11956260 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 493 |
| Conread position: | 1-559 |
| Cow position: | chr25:17904493-17905075 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-562 |
| Cow position: | chr25:18072089-18072657 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 17 |
| Conread position: | 1-562 |
| Cow position: | chr25:23393726-23394300 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 22 |
| Conread position: | 1-562 |
| Cow position: | chr25:41098343-41097760 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 253 |
| Conread position: | 1-569 |
| Cow position: | chr25:26353931-26353341 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 293 |
| Conread position: | 1-570 |
| Cow position: | chr25:14756556-14755967 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 198 |
| Conread position: | 1-570 |
| Cow position: | chr25:19139719-19139124 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-570 |
| Cow position: | chr25:29526008-29525420 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 103 |
| Conread position: | 1-570 |
| Cow position: | chr25:36350593-36351186 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 174 |
| Conread position: | 1-571 |
| Cow position: | chr25:11043474-11044064 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 173 |
| Conread position: | 1-571 |
| Cow position: | chr25:18474059-18474640 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 174 |
| Conread position: | 1-571 |
| Cow position: | chr25:18886628-18886035 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-571 |
| Cow position: | chr25:19337468-19336878 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 22 |
| Conread position: | 1-571 |
| Cow position: | chr25:24205258-24204684 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 76 |
| Conread position: | 1-571 |
| Cow position: | chr25:24655316-24654726 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 189 |
| Conread position: | 1-571 |
| Cow position: | chr25:26281878-26282473 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-571 |
| Cow position: | chr25:26781229-26780637 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 162 |
| Conread position: | 1-571 |
| Cow position: | chr25:26922695-26923292 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 197 |
| Conread position: | 1-571 |
| Cow position: | chr25:28862724-28863318 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 463 |
| Conread position: | 1-571 |
| Cow position: | chr25:29802892-29802296 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-571 |
| Cow position: | chr25:34673718-34673133 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 102 |
| Conread position: | 1-571 |
| Cow position: | chr25:41120862-41121451 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 146 |
| Conread position: | 1-571 |
| Cow position: | chr25:41135890-41135309 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 145 |
| Conread position: | 1-573 |
| Cow position: | chr25:25826307-25826904 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 1-577 |
| Cow position: | chr25:17657475-17658067 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 54 |
| Conread position: | 1-577 |
| Cow position: | chr25:20772473-20771882 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 138 |
| Conread position: | 1-577 |
| Cow position: | chr25:23326173-23325572 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 563 |
| Conread position: | 1-577 |
| Cow position: | chr25:35755390-35754792 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 267 |
| Conread position: | 4-303 |
| Cow position: | chr25:449934-449632 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 101, 126 |
| Conread position: | 4-316 |
| Cow position: | chr25:28420843-28420523 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 101 |
| Conread position: | 4-330 |
| Cow position: | chr25:21968025-21968368 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 4-493 |
| Cow position: | chr25:12939351-12938838 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 4-511 |
| Cow position: | chr25:9646820-9647339 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 330 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 175, 101 |
| Conread position: | 4-570 |
| Cow position: | chr25:34509323-34508734 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 291 |
| Conread position: | 4-571 |
| Cow position: | chr25:10136679-10137273 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 172 |
| Conread position: | 4-571 |
| Cow position: | chr25:17586164-17585567 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 170 |
| Conread position: | 4-571 |
| Cow position: | chr25:18489921-18490520 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 265 |
| Conread position: | 4-573 |
| Cow position: | chr25:3172543-3171967 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 207 |
| Conread position: | 4-573 |
| Cow position: | chr25:19367839-19367248 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 295 |
| Conread position: | 5-344 |
| Cow position: | chr25:10634149-10633801 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 203 |
| Conread position: | 5-553 |
| Cow position: | chr25:23740386-23739814 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 5-562 |
| Cow position: | chr25:10013204-10012621 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 169 |
| Conread position: | 5-562 |
| Cow position: | chr25:24637286-24636706 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 81 |
| Conread position: | 5-571 |
| Cow position: | chr25:25509730-25510338 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 305 |
| Conread position: | 5-571 |
| Cow position: | chr25:33838231-33838822 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 5-571 |
| Cow position: | chr25:41356940-41356354 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 169 |
| Conread position: | 5-573 |
| Cow position: | chr25:18265053-18265639 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 170 |
| Conread position: | 5-573 |
| Cow position: | chr25:29313456-29312873 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 5-577 |
| Cow position: | chr25:20495425-20495985 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 7-338 |
| Cow position: | chr25:18208825-18208485 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 50, 67 |
| Conread position: | 9-346 |
| Cow position: | chr25:15367601-15367947 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 97, 66 |
| Conread position: | 9-498 |
| Cow position: | chr25:2594633-2595140 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 162 |
| Conread position: | 9-505 |
| Cow position: | chr25:6954929-6955448 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 9-547 |
| Cow position: | chr25:37648293-37648841 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 84 |
| Conread position: | 9-570 |
| Cow position: | chr25:32610549-32609972 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 66 |
| Conread position: | 9-570 |
| Cow position: | chr25:35553531-35554116 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 144 |
| Conread position: | 9-571 |
| Cow position: | chr25:18190511-18189930 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 163 |
| Conread position: | 9-573 |
| Cow position: | chr25:12082484-12081906 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 60 |
| Conread position: | 10-275 |
| Cow position: | chr25:35626369-35626096 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 11-441 |
| Cow position: | chr25:33039609-33039169 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 279 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 94, 47 |
| Conread position: | 12-558 |
| Cow position: | chr25:18321317-18321874 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 12-571 |
| Cow position: | chr25:13786838-13787413 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 360 |
| Conread position: | 14-562 |
| Cow position: | chr25:35588944-35589515 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 15-572 |
| Cow position: | chr25:18269333-18269907 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 259 |
| Conread position: | 17-330 |
| Cow position: | chr25:22431621-22431944 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 84, 143 |
| Conread position: | 17-571 |
| Cow position: | chr25:34164688-34164113 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 20 |
| Conread position: | 20-571 |
| Cow position: | chr25:13959939-13960508 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 257 |
| Conread position: | 25-383 |
| Cow position: | chr25:23999306-23998936 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 26-329 |
| Cow position: | chr25:25039144-25039443 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 81, 13 |
| Conread position: | 26-577 |
| Cow position: | chr25:37593280-37593859 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 279 |
| Conread position: | 27-537 |
| Cow position: | chr25:41365077-41364557 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 337 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 30-571 |
| Cow position: | chr25:27231241-27231796 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 369 |
| Conread position: | 34-333 |
| Cow position: | chr25:35372727-35372416 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 40-573 |
| Cow position: | chr25:12756532-12755987 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 134 |
| Conread position: | 44-541 |
| Cow position: | chr25:12834458-12833964 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 331 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 63, 159 |
| Conread position: | 50-313 |
| Cow position: | chr25:41353504-41353238 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 140, 57 |
| Conread position: | 52-269 |
| Cow position: | chr25:30340456-30340225 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 52-300 |
| Cow position: | chr25:30810834-30811088 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 54, 158 |
| Conread position: | 52-562 |
| Cow position: | chr25:19923431-19923957 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 465 |
| Conread position: | 52-573 |
| Cow position: | chr25:40322384-40321839 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 476 |
| Conread position: | 55-549 |
| Cow position: | chr25:41386181-41385678 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 98 |
| Conread position: | 65-495 |
| Cow position: | chr25:23913589-23914037 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 40, 58 |
| Conread position: | 66-558 |
| Cow position: | chr25:40389815-40389299 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 68-454 |
| Cow position: | chr25:11124686-11125096 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 68-510 |
| Cow position: | chr25:18486386-18486844 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 69-571 |
| Cow position: | chr25:39386908-39386386 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 224 |
| Conread position: | 73-525 |
| Cow position: | chr25:4372765-4372313 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 102 |
| Conread position: | 73-549 |
| Cow position: | chr25:17554333-17553845 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 44 |
| Conread position: | 76-558 |
| Cow position: | chr25:26895981-26896479 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 326 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 30, 17 |
| Conread position: | 76-573 |
| Cow position: | chr25:16922861-16922345 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 85-550 |
| Cow position: | chr25:28275729-28275245 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 89 |
| Conread position: | 85-571 |
| Cow position: | chr25:18330839-18330327 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 443 |
| Conread position: | 93-571 |
| Cow position: | chr25:8655235-8655738 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 203 |
| Conread position: | 95-562 |
| Cow position: | chr25:36512234-36512712 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 255 |
| Conread position: | 106-268 |
| Cow position: | chr25:27076190-27076019 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 106-333 |
| Cow position: | chr25:29358051-29357815 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 106-562 |
| Cow position: | chr25:16801413-16801872 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 106-562 |
| Cow position: | chr25:17993180-17992709 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 319 |
| Conread position: | 106-571 |
| Cow position: | chr25:17995331-17994849 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 395 |
| Conread position: | 107-572 |
| Cow position: | chr25:20075442-20075923 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 292 |
| Conread position: | 114-456 |
| Cow position: | chr25:23366636-23366999 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 115-562 |
| Cow position: | chr25:28264318-28264783 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 198 |
| Conread position: | 120-329 |
| Cow position: | chr25:18180340-18180555 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 120-562 |
| Cow position: | chr25:24228360-24227910 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 51 |
| Conread position: | 131-573 |
| Cow position: | chr25:4522825-4522368 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 433 |
| Conread position: | 172-573 |
| Cow position: | chr25:34013726-34013308 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 279 |
| Conread position: | 174-573 |
| Cow position: | chr25:8934841-8935247 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 31 |
| Conread position: | 198-532 |
| Cow position: | chr25:14954976-14954632 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 43, 35 |
| Conread position: | 215-516 |
| Cow position: | chr25:41367070-41366760 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 221-553 |
| Cow position: | chr25:30326277-30325952 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 124, 146 |
| Conread position: | 223-577 |
| Cow position: | chr25:20613628-20613991 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 29 |
| Conread position: | 224-569 |
| Cow position: | chr25:3688223-3688582 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 224-569 |
| Cow position: | chr25:21120397-21120760 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 224-570 |
| Cow position: | chr25:4858411-4858050 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 224-570 |
| Cow position: | chr25:9413435-9413791 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 224-570 |
| Cow position: | chr25:15429592-15429232 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 224-570 |
| Cow position: | chr25:17808690-17808331 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 17 |
| Conread position: | 224-571 |
| Cow position: | chr25:17211046-17210686 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 311 |
| Conread position: | 224-573 |
| Cow position: | chr25:27145513-27145873 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 231-570 |
| Cow position: | chr25:34122001-34121646 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 233-514 |
| Cow position: | chr25:15453115-15453406 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 233-554 |
| Cow position: | chr25:21966486-21966819 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 239-524 |
| Cow position: | chr25:30636632-30636345 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 110, 99 |
| Conread position: | 245-508 |
| Cow position: | chr25:16430909-16430634 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 245-549 |
| Cow position: | chr25:35616980-35617293 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 86, 126 |
| Conread position: | 267-549 |
| Cow position: | chr25:17420399-17420105 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 109 |
| Conread position: | 267-573 |
| Cow position: | chr25:17994392-17994072 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 287-479 |
| Cow position: | chr25:24776507-24776707 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 287-573 |
| Cow position: | chr25:29216978-29216682 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 50, 137 |
| Conread position: | 296-577 |
| Cow position: | chr25:32607352-32607065 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 119 |
Show alignments to all cow chromosomes.