Cow genome map

Conread name: rpigcb_11416.y1

Conread position: 1-283
Cow position:
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 92

Conread position: 1-292
Cow position:
Alignm length: 305
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 281

Conread position: 1-333
Cow position:
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 103

Conread position: 1-333
Cow position:
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position:
Alignm length: 345
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-394
Cow position:
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 158

Conread position: 1-401
Cow position:
Alignm length: 432
Alignm identity: 300
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 37, 84

Conread position: 1-406
Cow position:
Alignm length: 421
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 19

Conread position: 1-435
Cow position:
Alignm length: 459
Alignm identity: 307
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 57, 119

Conread position: 1-454
Cow position:
Alignm length: 480
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 173

Conread position: 1-456
Cow position:
Alignm length: 480
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 72

Conread position: 1-505
Cow position:
Alignm length: 529
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-537
Cow position:
Alignm length: 560
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 69

Conread position: 1-549
Cow position:
Alignm length: 586
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 47

Conread position: 1-549
Cow position:
Alignm length: 578
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 120

Conread position: 1-558
Cow position:
Alignm length: 585
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 29

Conread position: 1-559
Cow position:
Alignm length: 578
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 493

Conread position: 1-559
Cow position:
Alignm length: 583
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-562
Cow position:
Alignm length: 580
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 17

Conread position: 1-562
Cow position:
Alignm length: 582
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 22

Conread position: 1-562
Cow position:
Alignm length: 585
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 253

Conread position: 1-569
Cow position:
Alignm length: 597
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 198

Conread position: 1-570
Cow position:
Alignm length: 596
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 103

Conread position: 1-570
Cow position:
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 174

Conread position: 1-571
Cow position:
Alignm length: 593
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 173

Conread position: 1-571
Cow position:
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 174

Conread position: 1-571
Cow position:
Alignm length: 594
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position:
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 22

Conread position: 1-571
Cow position:
Alignm length: 597
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 76

Conread position: 1-571
Cow position:
Alignm length: 600
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 189

Conread position: 1-571
Cow position:
Alignm length: 596
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position:
Alignm length: 597
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 162

Conread position: 1-571
Cow position:
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 197

Conread position: 1-571
Cow position:
Alignm length: 598
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 463

Conread position: 1-571
Cow position:
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position:
Alignm length: 600
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 102

Conread position: 1-571
Cow position:
Alignm length: 596
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 146

Conread position: 1-571
Cow position:
Alignm length: 593
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 145

Conread position: 1-573
Cow position:
Alignm length: 606
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 23

Conread position: 1-577
Cow position:
Alignm length: 598
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-577
Cow position:
Alignm length: 601
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 138

Conread position: 1-577
Cow position:
Alignm length: 603
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 563

Conread position: 1-577
Cow position:
Alignm length: 602
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 267

Conread position: 4-303
Cow position:
Alignm length: 315
Alignm identity: 214
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 101, 126

Conread position: 4-316
Cow position:
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 101

Conread position: 4-330
Cow position:
Alignm length: 344
Alignm identity: 218
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 4-493
Cow position:
Alignm length: 514
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-511
Cow position:
Alignm length: 524
Alignm identity: 330
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 175, 101

Conread position: 4-570
Cow position:
Alignm length: 593
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 291

Conread position: 4-571
Cow position:
Alignm length: 600
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 172

Conread position: 4-571
Cow position:
Alignm length: 600
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 170

Conread position: 4-571
Cow position:
Alignm length: 604
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 265

Conread position: 4-573
Cow position:
Alignm length: 589
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 207

Conread position: 4-573
Cow position:
Alignm length: 597
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 295

Conread position: 5-344
Cow position:
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 203

Conread position: 5-553
Cow position:
Alignm length: 582
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 47

Conread position: 5-562
Cow position:
Alignm length: 587
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 169

Conread position: 5-562
Cow position:
Alignm length: 586
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 81

Conread position: 5-571
Cow position:
Alignm length: 610
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 305

Conread position: 5-571
Cow position:
Alignm length: 602
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 37

Conread position: 5-571
Cow position:
Alignm length: 591
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 169

Conread position: 5-573
Cow position:
Alignm length: 592
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 170

Conread position: 5-573
Cow position:
Alignm length: 591
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 68

Conread position: 5-577
Cow position:
Alignm length: 586
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 7-338
Cow position:
Alignm length: 344
Alignm identity: 238
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 50, 67

Conread position: 9-346
Cow position:
Alignm length: 349
Alignm identity: 237
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 97, 66

Conread position: 9-498
Cow position:
Alignm length: 512
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 162

Conread position: 9-505
Cow position:
Alignm length: 520
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-547
Cow position:
Alignm length: 563
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 84

Conread position: 9-570
Cow position:
Alignm length: 585
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 66

Conread position: 9-570
Cow position:
Alignm length: 589
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 144

Conread position: 9-571
Cow position:
Alignm length: 586
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 163

Conread position: 9-573
Cow position:
Alignm length: 583
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 60

Conread position: 10-275
Cow position:
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 11-441
Cow position:
Alignm length: 450
Alignm identity: 279
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 94, 47

Conread position: 12-558
Cow position:
Alignm length: 570
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 43

Conread position: 12-571
Cow position:
Alignm length: 578
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 360

Conread position: 14-562
Cow position:
Alignm length: 572
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 15-572
Cow position:
Alignm length: 593
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 259

Conread position: 17-330
Cow position:
Alignm length: 326
Alignm identity: 206
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 84, 143

Conread position: 17-571
Cow position:
Alignm length: 580
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 20

Conread position: 20-571
Cow position:
Alignm length: 576
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 257

Conread position: 25-383
Cow position:
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 26-329
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 81, 13

Conread position: 26-577
Cow position:
Alignm length: 581
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 279

Conread position: 27-537
Cow position:
Alignm length: 533
Alignm identity: 337
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 76, 22

Conread position: 30-571
Cow position:
Alignm length: 560
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 369

Conread position: 34-333
Cow position:
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 40-573
Cow position:
Alignm length: 560
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 134

Conread position: 44-541
Cow position:
Alignm length: 510
Alignm identity: 331
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 63, 159

Conread position: 50-313
Cow position:
Alignm length: 275
Alignm identity: 189
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 140, 57

Conread position: 52-269
Cow position:
Alignm length: 233
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 52, 69

Conread position: 52-300
Cow position:
Alignm length: 256
Alignm identity: 167
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 158

Conread position: 52-562
Cow position:
Alignm length: 529
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 465

Conread position: 52-573
Cow position:
Alignm length: 548
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 476

Conread position: 55-549
Cow position:
Alignm length: 509
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 98

Conread position: 65-495
Cow position:
Alignm length: 455
Alignm identity: 300
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 58

Conread position: 66-558
Cow position:
Alignm length: 517
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 68-454
Cow position:
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 68-510
Cow position:
Alignm length: 464
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 95

Conread position: 69-571
Cow position:
Alignm length: 528
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 224

Conread position: 73-525
Cow position:
Alignm length: 466
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 102

Conread position: 73-549
Cow position:
Alignm length: 496
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 44

Conread position: 76-558
Cow position:
Alignm length: 505
Alignm identity: 326
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 30, 17

Conread position: 76-573
Cow position:
Alignm length: 523
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 139

Conread position: 85-550
Cow position:
Alignm length: 492
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 89

Conread position: 85-571
Cow position:
Alignm length: 514
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 443

Conread position: 93-571
Cow position:
Alignm length: 507
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 203

Conread position: 95-562
Cow position:
Alignm length: 483
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 255

Conread position: 106-268
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 106-333
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 88, 0

Conread position: 106-562
Cow position:
Alignm length: 473
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 36

Conread position: 106-562
Cow position:
Alignm length: 473
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 319

Conread position: 106-571
Cow position:
Alignm length: 484
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 395

Conread position: 107-572
Cow position:
Alignm length: 484
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 292

Conread position: 114-456
Cow position:
Alignm length: 369
Alignm identity: 258
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 77, 13

Conread position: 115-562
Cow position:
Alignm length: 468
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 198

Conread position: 120-329
Cow position:
Alignm length: 218
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 71, 37

Conread position: 120-562
Cow position:
Alignm length: 457
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 51

Conread position: 131-573
Cow position:
Alignm length: 461
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 433

Conread position: 172-573
Cow position:
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 279

Conread position: 174-573
Cow position:
Alignm length: 414
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 31

Conread position: 198-532
Cow position:
Alignm length: 350
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 35

Conread position: 215-516
Cow position:
Alignm length: 312
Alignm identity: 201
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 100

Conread position: 221-553
Cow position:
Alignm length: 336
Alignm identity: 217
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 124, 146

Conread position: 223-577
Cow position:
Alignm length: 371
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 29

Conread position: 224-569
Cow position:
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-569
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 110, 0

Conread position: 224-570
Cow position:
Alignm length: 362
Alignm identity: 250
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position:
Alignm length: 357
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position:
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position:
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 17

Conread position: 224-571
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 311

Conread position: 224-573
Cow position:
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 231-570
Cow position:
Alignm length: 356
Alignm identity: 246
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 104, 0

Conread position: 233-514
Cow position:
Alignm length: 294
Alignm identity: 200
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 102, 25

Conread position: 233-554
Cow position:
Alignm length: 334
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 239-524
Cow position:
Alignm length: 289
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 110, 99

Conread position: 245-508
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 245-549
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 86, 126

Conread position: 267-549
Cow position:
Alignm length: 296
Alignm identity: 199
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 109

Conread position: 267-573
Cow position:
Alignm length: 321
Alignm identity: 219
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 68, 0

Conread position: 287-479
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 287-573
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 50, 137

Conread position: 296-577
Cow position:
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 119

Show alignments to all cow chromosomes.