Cow genome map

Conread name: rpigcb_11416.y1

Conread position: 1-259
Cow position: chr5:66910004-66910274 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-264
Cow position: chr5:11358026-11358301 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 105, 0

Conread position: 1-268
Cow position: chr5:30157260-30157539 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-269
Cow position: chr5:23642312-23642038 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 197
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 24, 30

Conread position: 1-273
Cow position: chr5:72346211-72345914 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 83, 51

Conread position: 1-274
Cow position: chr5:2695902-2695617 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-277
Cow position: chr5:65597331-65597613 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 159

Conread position: 1-283
Cow position: chr5:13630594-13630300 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-290
Cow position: chr5:25901574-25901273 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 105, 0

Conread position: 1-300
Cow position: chr5:47697296-47696993 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 197, 77

Conread position: 1-313
Cow position: chr5:2203491-2203167 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-322
Cow position: chr5:38848685-38848352 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr5:24633139-24632795 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr5:29223359-29223021 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 103

Conread position: 1-333
Cow position: chr5:36907162-36906818 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chr5:59146277-59146621 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-334
Cow position: chr5:24643962-24643629 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 67

Conread position: 1-339
Cow position: chr5:26135373-26135018 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 148

Conread position: 1-340
Cow position: chr5:47872206-47871857 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 159

Conread position: 1-344
Cow position: chr5:29768959-29769314 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 268

Conread position: 1-365
Cow position: chr5:10299368-10299745 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-405
Cow position: chr5:48574914-48574502 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 60

Conread position: 1-419
Cow position: chr5:14543400-14542959 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 16

Conread position: 1-448
Cow position: chr5:6585553-6585082 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 295

Conread position: 1-451
Cow position: chr5:40791740-40792205 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 99

Conread position: 1-453
Cow position: chr5:34524347-34523871 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 319
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 57, 132

Conread position: 1-454
Cow position: chr5:9003210-9002734 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-481
Cow position: chr5:54136738-54136233 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-482
Cow position: chr5:46735376-46734874 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 292

Conread position: 1-492
Cow position: chr5:37735276-37735790 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-495
Cow position: chr5:46685714-46685219 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 54

Conread position: 1-497
Cow position: chr5:18667207-18667727 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-501
Cow position: chr5:30301758-30302256 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 90

Conread position: 1-512
Cow position: chr5:41488570-41489105 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 367

Conread position: 1-512
Cow position: chr5:44617045-44617580 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-522
Cow position: chr5:295165-295706 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-523
Cow position: chr5:24577336-24577883 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-528
Cow position: chr5:46779416-46779966 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-545
Cow position: chr5:41066925-41067479 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 150

Conread position: 1-546
Cow position: chr5:70348308-70348877 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 355
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 105, 93

Conread position: 1-549
Cow position: chr5:54786208-54785637 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 433

Conread position: 1-550
Cow position: chr5:4349089-4348542 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 268

Conread position: 1-552
Cow position: chr5:10262383-10261793 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 167

Conread position: 1-553
Cow position: chr5:40347220-40346632 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 80

Conread position: 1-562
Cow position: chr5:48225678-48225103 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 307

Conread position: 1-562
Cow position: chr5:58770970-58770387 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 162

Conread position: 1-569
Cow position: chr5:14636678-14636085 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-569
Cow position: chr5:49117451-49116858 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr5:443409-442814 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-570
Cow position: chr5:1382881-1383468 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 280

Conread position: 1-570
Cow position: chr5:5925059-5924488 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 1-570
Cow position: chr5:6455763-6455168 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-570
Cow position: chr5:6772468-6773060 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 159

Conread position: 1-570
Cow position: chr5:10772925-10772335 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 77

Conread position: 1-570
Cow position: chr5:20108127-20107537 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 528

Conread position: 1-570
Cow position: chr5:29256311-29255719 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 72

Conread position: 1-570
Cow position: chr5:36370092-36369497 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr5:41548634-41548064 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 29

Conread position: 1-570
Cow position: chr5:52823306-52822714 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 1-570
Cow position: chr5:53075969-53075375 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 43

Conread position: 1-570
Cow position: chr5:54928019-54927431 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 460

Conread position: 1-570
Cow position: chr5:54930347-54929759 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 460

Conread position: 1-570
Cow position: chr5:54952222-54951622 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chr5:59064344-59064938 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 286

Conread position: 1-570
Cow position: chr5:64779107-64778511 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 513

Conread position: 1-571
Cow position: chr5:710251-709659 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 572

Conread position: 1-571
Cow position: chr5:1339022-1338428 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 463

Conread position: 1-571
Cow position: chr5:2917364-2917951 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 315

Conread position: 1-571
Cow position: chr5:2976686-2977283 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 286

Conread position: 1-571
Cow position: chr5:3970425-3971018 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-571
Cow position: chr5:4963480-4962891 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 132

Conread position: 1-571
Cow position: chr5:5106125-5106718 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 92

Conread position: 1-571
Cow position: chr5:6125262-6124667 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 367

Conread position: 1-571
Cow position: chr5:10840569-10839980 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 360

Conread position: 1-571
Cow position: chr5:11632085-11631489 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr5:12133497-12134089 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 22

Conread position: 1-571
Cow position: chr5:15761469-15760880 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 92

Conread position: 1-571
Cow position: chr5:18119075-18118479 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr5:19979014-19978417 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr5:21189121-21189713 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 295

Conread position: 1-571
Cow position: chr5:24101550-24102146 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 1-571
Cow position: chr5:24298913-24299509 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr5:25912633-25913214 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 103

Conread position: 1-571
Cow position: chr5:27907566-27906972 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 262

Conread position: 1-571
Cow position: chr5:29742657-29742062 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 162

Conread position: 1-571
Cow position: chr5:31709200-31709787 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 462

Conread position: 1-571
Cow position: chr5:37379987-37380580 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr5:41229147-41228555 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 291

Conread position: 1-571
Cow position: chr5:44709482-44708876 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 169

Conread position: 1-571
Cow position: chr5:46666974-46667567 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 522

Conread position: 1-571
Cow position: chr5:46817202-46816608 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-571
Cow position: chr5:47560661-47560064 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr5:48026170-48026764 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 1-571
Cow position: chr5:49521610-49522197 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 103

Conread position: 1-571
Cow position: chr5:55630964-55631560 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-571
Cow position: chr5:72856774-72857372 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chr5:73485999-73485392 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 303

Conread position: 1-572
Cow position: chr5:27690894-27691479 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 15

Conread position: 1-573
Cow position: chr5:23829275-23828696 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 133

Conread position: 1-573
Cow position: chr5:25920873-25920297 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 25

Conread position: 1-573
Cow position: chr5:29634329-29634927 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chr5:34299792-34300366 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 150

Conread position: 1-573
Cow position: chr5:42743708-42744283 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 81

Conread position: 1-573
Cow position: chr5:46676513-46677108 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 292

Conread position: 1-573
Cow position: chr5:51166409-51165811 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-574
Cow position: chr5:53834554-53835170 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 132

Conread position: 1-577
Cow position: chr5:9235505-9234911 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 217

Conread position: 1-577
Cow position: chr5:18491306-18491914 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-577
Cow position: chr5:51501784-51502376 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 188

Conread position: 3-426
Cow position: chr5:48534757-48535186 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 157

Conread position: 4-315
Cow position: chr5:1229705-1230032 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 211
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 4-336
Cow position: chr5:41356930-41356596 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 228
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 78, 109

Conread position: 4-342
Cow position: chr5:9091519-9091173 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 97, 231

Conread position: 4-456
Cow position: chr5:64845362-64844888 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 156

Conread position: 4-481
Cow position: chr5:4434601-4434100 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-534
Cow position: chr5:46626370-46625819 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 14

Conread position: 4-549
Cow position: chr5:5682608-5682034 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 553

Conread position: 4-550
Cow position: chr5:8997113-8996542 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 311

Conread position: 4-562
Cow position: chr5:5937209-5937784 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 534

Conread position: 4-562
Cow position: chr5:22857731-22857149 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 32

Conread position: 4-569
Cow position: chr5:52829875-52829293 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 100

Conread position: 4-570
Cow position: chr5:1059664-1059072 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-571
Cow position: chr5:10853927-10853338 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 89

Conread position: 4-571
Cow position: chr5:46671514-46672103 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 51

Conread position: 4-571
Cow position: chr5:48805548-48804974 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 171

Conread position: 4-573
Cow position: chr5:13258505-13259072 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 75

Conread position: 4-573
Cow position: chr5:27549587-27549016 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 15

Conread position: 4-577
Cow position: chr5:10921748-10922347 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-577
Cow position: chr5:19970129-19969542 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 230

Conread position: 5-310
Cow position: chr5:46588100-46587785 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 101, 0

Conread position: 5-341
Cow position: chr5:47361123-47361454 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 24

Conread position: 5-434
Cow position: chr5:71457142-71456692 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 314

Conread position: 5-492
Cow position: chr5:42676165-42676650 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 128

Conread position: 5-498
Cow position: chr5:35446711-35446218 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 81

Conread position: 5-514
Cow position: chr5:33775863-33775348 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 71

Conread position: 5-545
Cow position: chr5:32165015-32164469 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 59

Conread position: 5-558
Cow position: chr5:18901238-18901794 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 156

Conread position: 5-562
Cow position: chr5:41954385-41953824 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 15

Conread position: 5-562
Cow position: chr5:56442163-56442742 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 210

Conread position: 5-570
Cow position: chr5:41411534-41410944 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 293

Conread position: 5-571
Cow position: chr5:10542766-10542182 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 112

Conread position: 5-571
Cow position: chr5:14905147-14904593 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 99

Conread position: 5-571
Cow position: chr5:58004140-58004716 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 158

Conread position: 5-573
Cow position: chr5:6572334-6571757 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 100

Conread position: 5-573
Cow position: chr5:62377278-62377855 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 99

Conread position: 5-577
Cow position: chr5:32965162-32964558 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 18

Conread position: 6-477
Cow position: chr5:47854740-47855226 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 119

Conread position: 6-573
Cow position: chr5:15723422-15722826 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 58

Conread position: 7-577
Cow position: chr5:62160018-62159420 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 124

Conread position: 9-274
Cow position: chr5:12729231-12728975 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 185, 52

Conread position: 9-302
Cow position: chr5:59072136-59071830 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 0

Conread position: 9-330
Cow position: chr5:46650013-46650338 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 128, 8

Conread position: 9-447
Cow position: chr5:4629676-4630132 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 154

Conread position: 9-454
Cow position: chr5:15454685-15455128 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 84

Conread position: 9-484
Cow position: chr5:29762833-29763314 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 149

Conread position: 9-499
Cow position: chr5:58198918-58199431 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 259

Conread position: 9-512
Cow position: chr5:10066642-10066115 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 522

Conread position: 9-517
Cow position: chr5:23353649-23354184 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 138

Conread position: 9-553
Cow position: chr5:19211854-19211302 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 349
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 97, 134

Conread position: 9-562
Cow position: chr5:4388087-4388663 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 185

Conread position: 9-562
Cow position: chr5:5716146-5715604 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 43

Conread position: 9-562
Cow position: chr5:6151924-6151347 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 9-562
Cow position: chr5:27178556-27179119 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 201

Conread position: 9-562
Cow position: chr5:27490883-27491452 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 206

Conread position: 9-562
Cow position: chr5:49565485-49566048 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 76

Conread position: 9-562
Cow position: chr5:58191825-58192400 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 260

Conread position: 9-570
Cow position: chr5:37625767-37626341 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 285

Conread position: 9-570
Cow position: chr5:42283078-42283658 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 336

Conread position: 9-571
Cow position: chr5:60238-59642 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 79

Conread position: 9-571
Cow position: chr5:4015964-4015376 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-571
Cow position: chr5:18249967-18250543 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 37

Conread position: 9-571
Cow position: chr5:18558496-18557922 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 182

Conread position: 9-571
Cow position: chr5:34683452-34682867 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 259

Conread position: 9-571
Cow position: chr5:47342782-47343370 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 148

Conread position: 9-573
Cow position: chr5:18405143-18404572 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 54

Conread position: 9-573
Cow position: chr5:26052638-26053229 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 10-338
Cow position: chr5:73444310-73444649 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 111

Conread position: 11-277
Cow position: chr5:28571458-28571732 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 95, 164

Conread position: 11-454
Cow position: chr5:32811118-32810653 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 11-482
Cow position: chr5:7396159-7396648 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 55

Conread position: 11-577
Cow position: chr5:41333522-41334086 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 24

Conread position: 14-562
Cow position: chr5:62436036-62436604 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 14-571
Cow position: chr5:51746137-51746714 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 14-571
Cow position: chr5:64061241-64061823 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 16-298
Cow position: chr5:70531547-70531259 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 156

Conread position: 17-333
Cow position: chr5:24158851-24159179 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 18-571
Cow position: chr5:21187851-21188427 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 276

Conread position: 22-336
Cow position: chr5:37653244-37653560 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 209
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 204

Conread position: 22-577
Cow position: chr5:7552706-7553260 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 27

Conread position: 26-287
Cow position: chr5:27655669-27655921 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 80, 148

Conread position: 26-515
Cow position: chr5:50899568-50900058 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 333
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 38

Conread position: 27-577
Cow position: chr5:23648499-23647933 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 65

Conread position: 27-577
Cow position: chr5:54622540-54623116 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 301

Conread position: 28-366
Cow position: chr5:2704635-2704275 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 250

Conread position: 28-574
Cow position: chr5:26096212-26096770 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 118

Conread position: 30-571
Cow position: chr5:45179917-45179353 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 526

Conread position: 32-406
Cow position: chr5:46707579-46707964 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 159, 17

Conread position: 34-514
Cow position: chr5:26100660-26101169 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 316
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 69, 457

Conread position: 38-484
Cow position: chr5:8178076-8178541 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 108

Conread position: 38-559
Cow position: chr5:31560182-31560723 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 55

Conread position: 38-571
Cow position: chr5:68593370-68593914 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 46

Conread position: 39-530
Cow position: chr5:15856300-15855784 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 464

Conread position: 40-549
Cow position: chr5:6576653-6576117 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 52

Conread position: 47-571
Cow position: chr5:41548061-41547526 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 128

Conread position: 49-571
Cow position: chr5:34708717-34709263 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 440

Conread position: 50-504
Cow position: chr5:23845593-23845127 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 190

Conread position: 50-570
Cow position: chr5:39362823-39363367 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 52-380
Cow position: chr5:31921013-31921356 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 208

Conread position: 54-343
Cow position: chr5:27613195-27613478 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 23, 39

Conread position: 55-324
Cow position: chr5:51294007-51293726 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 200

Conread position: 57-562
Cow position: chr5:72046707-72046187 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 236

Conread position: 58-562
Cow position: chr5:45704978-45705494 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 59-333
Cow position: chr5:17387459-17387173 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 0

Conread position: 64-573
Cow position: chr5:43991246-43991769 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 21

Conread position: 65-454
Cow position: chr5:12212497-12212911 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 65-571
Cow position: chr5:4754169-4753638 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 462

Conread position: 65-571
Cow position: chr5:54336869-54337395 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 395

Conread position: 65-577
Cow position: chr5:54088694-54089190 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 68

Conread position: 66-487
Cow position: chr5:28947439-28947000 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 304
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 55

Conread position: 69-559
Cow position: chr5:18703457-18702957 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 134

Conread position: 73-483
Cow position: chr5:41524028-41523582 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 306
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 33, 227

Conread position: 73-571
Cow position: chr5:59083237-59082721 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 271

Conread position: 74-570
Cow position: chr5:76099057-76098536 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 480

Conread position: 75-570
Cow position: chr5:57336390-57335869 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 85-454
Cow position: chr5:12337258-12337650 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 85-498
Cow position: chr5:26073802-26073367 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 298
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 175

Conread position: 85-570
Cow position: chr5:445463-445974 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 85-571
Cow position: chr5:55722513-55723025 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 85-572
Cow position: chr5:57936138-57935623 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 317

Conread position: 86-494
Cow position: chr5:40270854-40270433 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 285
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 72

Conread position: 86-573
Cow position: chr5:3551716-3551222 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 117

Conread position: 86-573
Cow position: chr5:40929033-40928528 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 7

Conread position: 87-571
Cow position: chr5:24088066-24087554 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 88-458
Cow position: chr5:16085819-16085429 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 103, 83

Conread position: 93-570
Cow position: chr5:4683507-4683006 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 212

Conread position: 106-300
Cow position: chr5:46000164-45999965 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 95

Conread position: 106-371
Cow position: chr5:33536625-33536900 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 98, 80

Conread position: 106-453
Cow position: chr5:27196052-27195686 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 65

Conread position: 106-550
Cow position: chr5:4165639-4166101 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 183

Conread position: 106-562
Cow position: chr5:6694542-6695018 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 445

Conread position: 106-562
Cow position: chr5:24221005-24221472 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 61

Conread position: 106-562
Cow position: chr5:48409435-48408973 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 154

Conread position: 106-570
Cow position: chr5:1395450-1394965 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 28

Conread position: 106-571
Cow position: chr5:35207250-35207732 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 295

Conread position: 106-571
Cow position: chr5:44275609-44276091 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 48

Conread position: 107-570
Cow position: chr5:41586283-41586769 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 111-549
Cow position: chr5:29558610-29559060 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 259

Conread position: 115-562
Cow position: chr5:41603298-41603760 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 343

Conread position: 116-558
Cow position: chr5:21524071-21524529 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 120-341
Cow position: chr5:16895126-16894898 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 120-563
Cow position: chr5:66278462-66278910 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 295
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 101, 23

Conread position: 121-573
Cow position: chr5:66337887-66338343 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 308
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 89, 36

Conread position: 127-571
Cow position: chr5:7175328-7175794 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 7

Conread position: 131-550
Cow position: chr5:59448674-59448244 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 281
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 93, 50

Conread position: 131-571
Cow position: chr5:59782729-59782283 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 325

Conread position: 133-532
Cow position: chr5:1105837-1105422 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 136-572
Cow position: chr5:34527615-34528051 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 137-341
Cow position: chr5:60446472-60446684 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 143-577
Cow position: chr5:40357899-40357467 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 182

Conread position: 145-567
Cow position: chr5:43437895-43437452 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 143

Conread position: 149-426
Cow position: chr5:58353269-58353555 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 71

Conread position: 149-539
Cow position: chr5:45941936-45941534 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 11

Conread position: 149-559
Cow position: chr5:15362095-15362519 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 152-490
Cow position: chr5:28026453-28026795 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 136

Conread position: 152-573
Cow position: chr5:28012911-28013355 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 152-577
Cow position: chr5:55087907-55088369 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 154-571
Cow position: chr5:7498929-7498489 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 160-573
Cow position: chr5:6671107-6670682 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 132

Conread position: 164-571
Cow position: chr5:280113-279684 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 317

Conread position: 164-576
Cow position: chr5:41951992-41951568 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 263

Conread position: 179-479
Cow position: chr5:18275556-18275849 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 21

Conread position: 200-568
Cow position: chr5:10254671-10255048 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 29, 160

Conread position: 201-571
Cow position: chr5:14558353-14557959 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 289

Conread position: 220-556
Cow position: chr5:58145509-58145174 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 121, 21

Conread position: 221-539
Cow position: chr5:17426019-17425687 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 8, 96

Conread position: 221-539
Cow position: chr5:40828248-40827915 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 8, 103

Conread position: 221-562
Cow position: chr5:71063685-71064038 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 23, 142

Conread position: 221-571
Cow position: chr5:29968739-29969104 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 221-571
Cow position: chr5:43984215-43984579 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 62

Conread position: 221-571
Cow position: chr5:53185372-53185008 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 255

Conread position: 221-577
Cow position: chr5:28016189-28016556 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 25

Conread position: 223-432
Cow position: chr5:50923710-50923491 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 224-393
Cow position: chr5:37384400-37384224 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 224-484
Cow position: chr5:6219079-6219352 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 89, 78

Conread position: 224-501
Cow position: chr5:27006784-27007068 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 142, 32

Conread position: 224-501
Cow position: chr5:67813997-67814286 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 111, 0

Conread position: 224-534
Cow position: chr5:16909771-16909459 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 153

Conread position: 224-558
Cow position: chr5:5787195-5786849 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 106, 267

Conread position: 224-558
Cow position: chr5:10096705-10096364 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 111, 152

Conread position: 224-558
Cow position: chr5:55985783-55986117 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 230
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 113, 91

Conread position: 224-570
Cow position: chr5:2395173-2394819 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 249
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 111, 302

Conread position: 224-570
Cow position: chr5:59146743-59147102 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 244

Conread position: 224-571
Cow position: chr5:6060496-6060136 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 61

Conread position: 224-571
Cow position: chr5:39936235-39936598 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 68

Conread position: 224-573
Cow position: chr5:32697656-32697311 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 32

Conread position: 224-573
Cow position: chr5:52041349-52040991 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 57

Conread position: 224-573
Cow position: chr5:58900909-58900546 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-573
Cow position: chr5:66256767-66257121 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 41

Conread position: 224-577
Cow position: chr5:9676494-9676130 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 349

Conread position: 224-577
Cow position: chr5:39816165-39815810 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 23

Conread position: 224-577
Cow position: chr5:50599194-50599561 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 70

Conread position: 225-512
Cow position: chr5:54125200-54125498 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 234

Conread position: 225-577
Cow position: chr5:1344753-1344389 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 39

Conread position: 225-577
Cow position: chr5:27063103-27062765 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 130

Conread position: 226-577
Cow position: chr5:14630793-14630434 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 285

Conread position: 227-550
Cow position: chr5:54454634-54454954 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 55

Conread position: 227-562
Cow position: chr5:4199484-4199153 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 227-571
Cow position: chr5:411581-411223 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 246

Conread position: 229-492
Cow position: chr5:1780442-1780175 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 46, 79

Conread position: 229-570
Cow position: chr5:38662865-38663216 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 101, 239

Conread position: 230-503
Cow position: chr5:41608377-41608644 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 234-573
Cow position: chr5:68273704-68273351 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 235-571
Cow position: chr5:39216401-39216751 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 236-552
Cow position: chr5:25496262-25495940 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 100, 265

Conread position: 236-552
Cow position: chr5:47600915-47601238 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 45

Conread position: 241-562
Cow position: chr5:31217244-31217573 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 244-484
Cow position: chr5:54868371-54868623 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 91, 0

Conread position: 244-571
Cow position: chr5:10479493-10479148 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 242
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 273

Conread position: 244-573
Cow position: chr5:52646185-52645845 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 92, 0

Conread position: 245-573
Cow position: chr5:34532772-34533115 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 92, 48

Conread position: 247-568
Cow position: chr5:54360963-54360628 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 88, 0

Conread position: 255-569
Cow position: chr5:27058473-27058146 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 259-558
Cow position: chr5:19780865-19780553 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 76, 0

Conread position: 259-573
Cow position: chr5:49102994-49103322 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 76, 0

Conread position: 263-513
Cow position: chr5:65593070-65593331 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 263-570
Cow position: chr5:35497682-35498003 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 72, 0

Conread position: 267-577
Cow position: chr5:32339778-32339458 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 219
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 76

Conread position: 284-562
Cow position: chr5:72172197-72172475 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 53, 108

Conread position: 287-559
Cow position: chr5:72345644-72345360 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 294-541
Cow position: chr5:46295480-46295221 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 48, 246

Conread position: 295-577
Cow position: chr5:40712267-40711979 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 86

Conread position: 388-569
Cow position: chr5:42671721-42671540 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 79

Conread position: 391-571
Cow position: chr5:37288497-37288678 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 0

Conread position: 421-573
Cow position: chr5:30486590-30486742 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.