Cow genome map

Conread name: rpigcb_11416.y1

Conread position: 1-250
Cow position: chrX:21892384-21892645 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 102, 0

Conread position: 1-254
Cow position: chrX:24734540-24734802 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 105, 180

Conread position: 1-262
Cow position: chrX:33829920-33830185 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 105, 92

Conread position: 1-273
Cow position: chrX:6656141-6655860 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 33

Conread position: 1-273
Cow position: chrX:6854837-6854558 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 105, 132

Conread position: 1-277
Cow position: chrX:9228026-9227738 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 174

Conread position: 1-277
Cow position: chrX:12997034-12996746 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-280
Cow position: chrX:20741729-20742020 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-283
Cow position: chrX:30435742-30435447 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-299
Cow position: chrX:29930516-29930207 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 303

Conread position: 1-301
Cow position: chrX:24321752-24321439 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chrX:7120483-7120827 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 296

Conread position: 1-333
Cow position: chrX:7484683-7485027 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-333
Cow position: chrX:16085782-16085438 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chrX:16803990-16803647 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 92

Conread position: 1-333
Cow position: chrX:18024116-18023772 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-333
Cow position: chrX:24345925-24346269 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chrX:26618000-26618344 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chrX:27497708-27498049 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 19

Conread position: 1-333
Cow position: chrX:30965110-30964766 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-333
Cow position: chrX:34094582-34094926 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-339
Cow position: chrX:4406761-4407109 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 25

Conread position: 1-339
Cow position: chrX:4767575-4767916 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 264

Conread position: 1-339
Cow position: chrX:23222150-23221817 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 249
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 105, 37

Conread position: 1-340
Cow position: chrX:29765876-29766225 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 160, 105

Conread position: 1-341
Cow position: chrX:22809141-22809481 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 106, 206

Conread position: 1-347
Cow position: chrX:6201409-6201760 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 133

Conread position: 1-379
Cow position: chrX:33537460-33537848 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 260
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 106, 159

Conread position: 1-394
Cow position: chrX:20674744-20675156 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-394
Cow position: chrX:25817941-25817534 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 224

Conread position: 1-400
Cow position: chrX:29287874-29288288 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 145

Conread position: 1-406
Cow position: chrX:6235971-6235552 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 130

Conread position: 1-406
Cow position: chrX:28132977-28133394 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 93

Conread position: 1-423
Cow position: chrX:32329078-32329521 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 1-426
Cow position: chrX:32064291-32063846 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 127

Conread position: 1-439
Cow position: chrX:28647393-28646942 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 19

Conread position: 1-448
Cow position: chrX:5360886-5361357 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-450
Cow position: chrX:21661891-21662385 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 51, 322

Conread position: 1-454
Cow position: chrX:620384-619906 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 324
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 104, 34

Conread position: 1-454
Cow position: chrX:20357123-20356642 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-454
Cow position: chrX:26230882-26230405 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-487
Cow position: chrX:15122284-15121803 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 133

Conread position: 1-487
Cow position: chrX:16808937-16808428 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 92

Conread position: 1-495
Cow position: chrX:21793466-21793985 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-501
Cow position: chrX:40070727-40070210 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 233

Conread position: 1-525
Cow position: chrX:3649950-3649399 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 307

Conread position: 1-532
Cow position: chrX:22869695-22870250 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 510

Conread position: 1-543
Cow position: chrX:19608552-19609118 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 122

Conread position: 1-549
Cow position: chrX:2008820-2008257 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 65

Conread position: 1-549
Cow position: chrX:12307886-12307309 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-549
Cow position: chrX:16525667-16526237 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 51

Conread position: 1-549
Cow position: chrX:29790940-29790373 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 291

Conread position: 1-549
Cow position: chrX:35938189-35937637 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 149

Conread position: 1-550
Cow position: chrX:23572942-23572369 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 487

Conread position: 1-552
Cow position: chrX:6044574-6044038 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 29

Conread position: 1-554
Cow position: chrX:24588858-24588287 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 295

Conread position: 1-557
Cow position: chrX:32145380-32144812 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 306

Conread position: 1-562
Cow position: chrX:4623077-4622493 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-562
Cow position: chrX:5289808-5289225 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-562
Cow position: chrX:14125369-14124785 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 1-562
Cow position: chrX:14462197-14462770 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 38

Conread position: 1-562
Cow position: chrX:15140654-15140087 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 413

Conread position: 1-562
Cow position: chrX:16278532-16279113 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 480

Conread position: 1-562
Cow position: chrX:18222289-18222874 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 280

Conread position: 1-562
Cow position: chrX:27615689-27616264 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 174

Conread position: 1-562
Cow position: chrX:28624878-28624299 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 103

Conread position: 1-562
Cow position: chrX:30090166-30089592 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 173

Conread position: 1-562
Cow position: chrX:31728343-31728924 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 291

Conread position: 1-562
Cow position: chrX:39548275-39548860 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-562
Cow position: chrX:41847653-41847073 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 143

Conread position: 1-562
Cow position: chrX:42732748-42733327 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 430

Conread position: 1-570
Cow position: chrX:3082257-3081660 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 266

Conread position: 1-570
Cow position: chrX:3372976-3372382 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-570
Cow position: chrX:5320837-5320248 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 44

Conread position: 1-570
Cow position: chrX:5866022-5866617 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chrX:6453574-6454167 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 72

Conread position: 1-570
Cow position: chrX:6580811-6581405 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chrX:8640664-8641259 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chrX:9127931-9128527 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-570
Cow position: chrX:12359761-12360359 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 1-570
Cow position: chrX:13928866-13928281 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 346

Conread position: 1-570
Cow position: chrX:14050317-14049723 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chrX:16854489-16853919 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 286

Conread position: 1-570
Cow position: chrX:18656929-18656334 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chrX:19398654-19399249 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chrX:19474272-19473689 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-570
Cow position: chrX:20020448-20021048 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 182

Conread position: 1-570
Cow position: chrX:21767676-21768275 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chrX:22077464-22076871 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 173

Conread position: 1-570
Cow position: chrX:22564808-22564216 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 274

Conread position: 1-570
Cow position: chrX:24468247-24467654 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 267

Conread position: 1-570
Cow position: chrX:25289803-25289208 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chrX:26275015-26275609 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 283

Conread position: 1-570
Cow position: chrX:27304807-27305400 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 63

Conread position: 1-570
Cow position: chrX:27423395-27422810 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 175

Conread position: 1-570
Cow position: chrX:27758585-27759178 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chrX:29225354-29225949 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chrX:30053592-30052998 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 571

Conread position: 1-570
Cow position: chrX:30200116-30199521 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-570
Cow position: chrX:30836263-30836844 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-570
Cow position: chrX:31201717-31202312 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 294

Conread position: 1-570
Cow position: chrX:36194972-36195563 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 277

Conread position: 1-570
Cow position: chrX:36535853-36535264 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 159

Conread position: 1-570
Cow position: chrX:37080638-37080048 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 202

Conread position: 1-570
Cow position: chrX:38961974-38961375 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chrX:672115-671531 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 63

Conread position: 1-571
Cow position: chrX:2047988-2048584 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chrX:2103281-2103877 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-571
Cow position: chrX:2479752-2479155 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 413

Conread position: 1-571
Cow position: chrX:3360698-3361293 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 38

Conread position: 1-571
Cow position: chrX:5354424-5353831 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 151

Conread position: 1-571
Cow position: chrX:6372056-6372653 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chrX:7551925-7551331 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 290

Conread position: 1-571
Cow position: chrX:7754782-7755373 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 317

Conread position: 1-571
Cow position: chrX:8435322-8434732 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 92

Conread position: 1-571
Cow position: chrX:9011207-9011799 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 1-571
Cow position: chrX:9169729-9169142 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 237

Conread position: 1-571
Cow position: chrX:10413098-10412498 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 1-571
Cow position: chrX:10439032-10438466 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 43

Conread position: 1-571
Cow position: chrX:10445537-10444943 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 57

Conread position: 1-571
Cow position: chrX:11146458-11145865 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 480

Conread position: 1-571
Cow position: chrX:11976569-11975974 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 173

Conread position: 1-571
Cow position: chrX:14801942-14801346 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 152

Conread position: 1-571
Cow position: chrX:15621655-15621060 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 317

Conread position: 1-571
Cow position: chrX:16360131-16359537 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 423

Conread position: 1-571
Cow position: chrX:16702547-16703143 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 430

Conread position: 1-571
Cow position: chrX:16710832-16711427 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 293

Conread position: 1-571
Cow position: chrX:16782162-16782752 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 47

Conread position: 1-571
Cow position: chrX:17054444-17055041 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-571
Cow position: chrX:17782376-17782971 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 492

Conread position: 1-571
Cow position: chrX:17891420-17892011 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 492

Conread position: 1-571
Cow position: chrX:21592169-21592759 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 173

Conread position: 1-571
Cow position: chrX:21685497-21686091 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 63

Conread position: 1-571
Cow position: chrX:21832762-21833341 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 331

Conread position: 1-571
Cow position: chrX:23134473-23135048 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 103

Conread position: 1-571
Cow position: chrX:23279903-23280479 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 137

Conread position: 1-571
Cow position: chrX:24769980-24769388 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 317

Conread position: 1-571
Cow position: chrX:26530849-26531431 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 450

Conread position: 1-571
Cow position: chrX:27591147-27590562 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 214

Conread position: 1-571
Cow position: chrX:28753460-28752868 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-571
Cow position: chrX:28879704-28879134 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 77

Conread position: 1-571
Cow position: chrX:29082948-29083550 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 104

Conread position: 1-571
Cow position: chrX:30165784-30165201 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 92

Conread position: 1-571
Cow position: chrX:30172829-30172236 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 77

Conread position: 1-571
Cow position: chrX:30455740-30455150 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 162

Conread position: 1-571
Cow position: chrX:31495613-31496208 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 257

Conread position: 1-571
Cow position: chrX:31978963-31978369 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 51

Conread position: 1-571
Cow position: chrX:34760942-34761538 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chrX:35532732-35533323 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 266

Conread position: 1-571
Cow position: chrX:38231391-38230795 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chrX:39560784-39560180 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 1-571
Cow position: chrX:39713427-39714023 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-571
Cow position: chrX:44193560-44192970 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-572
Cow position: chrX:20503519-20504119 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 211

Conread position: 1-572
Cow position: chrX:40693855-40693250 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 18

Conread position: 1-573
Cow position: chrX:5647228-5646630 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chrX:10866980-10866392 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 103

Conread position: 1-573
Cow position: chrX:11074286-11073735 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 103

Conread position: 1-573
Cow position: chrX:11409458-11408860 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chrX:17664039-17663444 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 174

Conread position: 1-573
Cow position: chrX:18193566-18194164 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-573
Cow position: chrX:23986126-23986723 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 1-573
Cow position: chrX:24109725-24109133 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 24

Conread position: 1-573
Cow position: chrX:27318107-27318705 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chrX:32643362-32643960 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-573
Cow position: chrX:36729260-36729858 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-576
Cow position: chrX:13178730-13178117 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-577
Cow position: chrX:2299771-2300358 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 123

Conread position: 1-577
Cow position: chrX:2382342-2382946 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 396

Conread position: 1-577
Cow position: chrX:15260739-15260141 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 136

Conread position: 1-577
Cow position: chrX:24292790-24292201 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 133

Conread position: 4-322
Cow position: chrX:5375397-5375068 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 31

Conread position: 4-334
Cow position: chrX:26755760-26755421 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 262

Conread position: 4-394
Cow position: chrX:24316695-24317110 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 284
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 103, 316

Conread position: 4-408
Cow position: chrX:41885298-41884883 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 160

Conread position: 4-417
Cow position: chrX:21818575-21818165 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 140

Conread position: 4-483
Cow position: chrX:29916467-29915964 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 365

Conread position: 4-494
Cow position: chrX:33583572-33584081 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 93

Conread position: 4-495
Cow position: chrX:11462114-11461602 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 178

Conread position: 4-526
Cow position: chrX:22818954-22819480 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 85

Conread position: 4-549
Cow position: chrX:25282615-25282045 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 141

Conread position: 4-549
Cow position: chrX:26442371-26441812 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 171

Conread position: 4-558
Cow position: chrX:27983474-27982913 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 321

Conread position: 4-562
Cow position: chrX:6870683-6870102 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 89

Conread position: 4-562
Cow position: chrX:15151785-15151215 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 223

Conread position: 4-562
Cow position: chrX:25847702-25848266 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 53

Conread position: 4-562
Cow position: chrX:29942055-29942611 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 42

Conread position: 4-562
Cow position: chrX:30164357-30163777 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 135

Conread position: 4-568
Cow position: chrX:5332552-5331968 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 171

Conread position: 4-571
Cow position: chrX:4906108-4905518 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 290

Conread position: 4-571
Cow position: chrX:6279726-6279134 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 207

Conread position: 4-571
Cow position: chrX:21226361-21226946 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 29

Conread position: 4-571
Cow position: chrX:23039104-23038525 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 88

Conread position: 4-571
Cow position: chrX:27754307-27754901 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 4-571
Cow position: chrX:42222890-42222316 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 421

Conread position: 4-572
Cow position: chrX:30059775-30060361 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 33

Conread position: 4-573
Cow position: chrX:30229233-30228640 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 123

Conread position: 4-577
Cow position: chrX:24175069-24174477 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 9

Conread position: 4-577
Cow position: chrX:27451153-27450573 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 35

Conread position: 4-577
Cow position: chrX:34993068-34993650 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 19

Conread position: 5-324
Cow position: chrX:38998721-38999042 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 147

Conread position: 5-353
Cow position: chrX:39697648-39698008 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 5-380
Cow position: chrX:35287305-35287699 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 161

Conread position: 5-412
Cow position: chrX:8400664-8400253 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 274
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 87

Conread position: 5-441
Cow position: chrX:24032097-24031666 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 297
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 96, 83

Conread position: 5-484
Cow position: chrX:22539154-22538650 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 5-489
Cow position: chrX:11991270-11990763 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 340
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 100, 139

Conread position: 5-491
Cow position: chrX:29880399-29879890 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 200

Conread position: 5-513
Cow position: chrX:30681618-30681092 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 88

Conread position: 5-562
Cow position: chrX:11744150-11744729 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 169

Conread position: 5-562
Cow position: chrX:26436612-26437197 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 212

Conread position: 5-570
Cow position: chrX:5334933-5334348 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 170

Conread position: 5-571
Cow position: chrX:3406448-3405883 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 110

Conread position: 5-571
Cow position: chrX:22579507-22578917 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 289

Conread position: 5-571
Cow position: chrX:23452567-23451973 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 5-573
Cow position: chrX:17889971-17889404 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 92

Conread position: 5-573
Cow position: chrX:34008660-34009221 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 56

Conread position: 5-577
Cow position: chrX:28633574-28632997 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 221

Conread position: 6-571
Cow position: chrX:7572272-7572852 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 402

Conread position: 7-495
Cow position: chrX:21494323-21494809 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 333
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 187, 62

Conread position: 7-558
Cow position: chrX:20363252-20362693 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 374
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 99, 78

Conread position: 7-577
Cow position: chrX:20652301-20652886 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 58

Conread position: 8-347
Cow position: chrX:3581820-3582172 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 98, 152

Conread position: 8-577
Cow position: chrX:38852046-38852637 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 152

Conread position: 9-277
Cow position: chrX:2185114-2185389 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 192
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 49

Conread position: 9-277
Cow position: chrX:24446838-24447118 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 9-298
Cow position: chrX:40828221-40827926 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 29

Conread position: 9-341
Cow position: chrX:43074763-43075111 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 244
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 74, 0

Conread position: 9-383
Cow position: chrX:3155696-3155308 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 98, 85

Conread position: 9-387
Cow position: chrX:26622921-26622542 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 40

Conread position: 9-454
Cow position: chrX:26446984-26447432 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 88

Conread position: 9-487
Cow position: chrX:11499890-11499397 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 151

Conread position: 9-492
Cow position: chrX:8590464-8590973 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 9-494
Cow position: chrX:8482332-8482832 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 134

Conread position: 9-497
Cow position: chrX:28557251-28557750 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 88

Conread position: 9-514
Cow position: chrX:15978067-15977540 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 75

Conread position: 9-521
Cow position: chrX:29099303-29099836 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 137

Conread position: 9-532
Cow position: chrX:26508122-26508653 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 52

Conread position: 9-536
Cow position: chrX:23342107-23341556 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-548
Cow position: chrX:1549849-1550412 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 285

Conread position: 9-553
Cow position: chrX:13069853-13069291 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 73

Conread position: 9-553
Cow position: chrX:13090414-13089852 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 73

Conread position: 9-562
Cow position: chrX:25451220-25451783 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 65

Conread position: 9-562
Cow position: chrX:27977948-27977370 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 478

Conread position: 9-570
Cow position: chrX:2579305-2579890 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 25

Conread position: 9-570
Cow position: chrX:4342635-4343220 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-570
Cow position: chrX:10528900-10528303 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 165

Conread position: 9-570
Cow position: chrX:12144983-12145573 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-570
Cow position: chrX:18488830-18488243 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-570
Cow position: chrX:37852022-37852610 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 151

Conread position: 9-571
Cow position: chrX:5248275-5248856 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 88

Conread position: 9-571
Cow position: chrX:7096343-7096930 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 284

Conread position: 9-571
Cow position: chrX:14782461-14781874 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 454

Conread position: 9-571
Cow position: chrX:16040794-16040209 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 37

Conread position: 9-571
Cow position: chrX:16087239-16086651 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-571
Cow position: chrX:16465191-16465772 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-571
Cow position: chrX:18243877-18244454 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 151

Conread position: 9-571
Cow position: chrX:20953419-20954003 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 53

Conread position: 9-571
Cow position: chrX:21343280-21343866 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 5

Conread position: 9-571
Cow position: chrX:22612287-22612857 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 338

Conread position: 9-571
Cow position: chrX:23387649-23387066 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 181

Conread position: 9-571
Cow position: chrX:24483478-24482897 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 284

Conread position: 9-571
Cow position: chrX:30181040-30180455 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 9-571
Cow position: chrX:34442544-34441971 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 137

Conread position: 9-571
Cow position: chrX:41156196-41156783 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 159

Conread position: 9-573
Cow position: chrX:22810779-22811363 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 95

Conread position: 10-525
Cow position: chrX:36691729-36692258 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 95

Conread position: 10-571
Cow position: chrX:23395492-23396079 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 11-475
Cow position: chrX:5365708-5365225 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 321
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 95, 62

Conread position: 11-477
Cow position: chrX:21389464-21389954 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 11-498
Cow position: chrX:21414753-21415264 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 11-562
Cow position: chrX:39556902-39556334 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 225

Conread position: 11-570
Cow position: chrX:2560072-2559489 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 283

Conread position: 11-571
Cow position: chrX:29908316-29907730 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 11-573
Cow position: chrX:39352725-39352170 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 206

Conread position: 12-513
Cow position: chrX:10059353-10059877 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 122

Conread position: 12-571
Cow position: chrX:6406243-6406818 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 161

Conread position: 13-569
Cow position: chrX:23022206-23022783 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 468

Conread position: 14-408
Cow position: chrX:12289624-12290022 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 275
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 73

Conread position: 14-569
Cow position: chrX:17994351-17994929 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 139

Conread position: 14-570
Cow position: chrX:9642543-9641961 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 14-577
Cow position: chrX:34221650-34222229 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 71

Conread position: 16-333
Cow position: chrX:17290073-17290400 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 174

Conread position: 16-380
Cow position: chrX:20792033-20792410 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 258
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 90, 42

Conread position: 17-445
Cow position: chrX:34564006-34564421 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 279
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 90, 133

Conread position: 17-476
Cow position: chrX:33685023-33685506 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 17-570
Cow position: chrX:37404337-37403765 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 17-573
Cow position: chrX:31261739-31261162 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 76

Conread position: 25-571
Cow position: chrX:26760668-26760096 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 25-577
Cow position: chrX:4481882-4482431 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 19

Conread position: 26-571
Cow position: chrX:12310484-12309914 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 134

Conread position: 28-531
Cow position: chrX:41791816-41791282 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 181

Conread position: 28-571
Cow position: chrX:46296565-46297132 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 225

Conread position: 31-570
Cow position: chrX:28503242-28503807 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 34-333
Cow position: chrX:45374198-45373888 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 67, 0

Conread position: 34-394
Cow position: chrX:22118585-22118208 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 72, 340

Conread position: 34-549
Cow position: chrX:13430877-13430347 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 83

Conread position: 35-571
Cow position: chrX:40225324-40224773 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 499

Conread position: 36-573
Cow position: chrX:2813572-2813008 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 259

Conread position: 44-277
Cow position: chrX:29047034-29047279 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 44-571
Cow position: chrX:14597765-14598318 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 439

Conread position: 44-571
Cow position: chrX:29759609-29760159 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 130

Conread position: 45-558
Cow position: chrX:28523724-28523211 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 335
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 118

Conread position: 45-562
Cow position: chrX:47000733-47000190 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 451

Conread position: 50-571
Cow position: chrX:38150612-38151161 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 109

Conread position: 51-559
Cow position: chrX:47986424-47986955 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 338
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 79

Conread position: 52-502
Cow position: chrX:47988515-47988983 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 299
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 80

Conread position: 52-570
Cow position: chrX:28587899-28588442 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 108

Conread position: 52-577
Cow position: chrX:36839641-36840181 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 53-424
Cow position: chrX:3652602-3652964 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 257
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 40

Conread position: 54-339
Cow position: chrX:40184001-40184299 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 12, 0

Conread position: 54-576
Cow position: chrX:40560608-40560068 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 14

Conread position: 57-333
Cow position: chrX:15175617-15175332 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 50, 119

Conread position: 62-333
Cow position: chrX:28058259-28058542 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 62-514
Cow position: chrX:33804049-33803592 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 112

Conread position: 65-498
Cow position: chrX:12345836-12346293 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 65-570
Cow position: chrX:39185113-39185644 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 65-571
Cow position: chrX:2500690-2500159 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 262

Conread position: 65-571
Cow position: chrX:3465134-3464604 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 109

Conread position: 66-571
Cow position: chrX:22887603-22888130 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 187

Conread position: 67-571
Cow position: chrX:4995566-4996087 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 68-333
Cow position: chrX:33763088-33763365 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 0

Conread position: 68-539
Cow position: chrX:24279860-24280341 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 307

Conread position: 73-330
Cow position: chrX:22838220-22838489 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 32, 0

Conread position: 73-333
Cow position: chrX:9764123-9763851 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 33, 224

Conread position: 73-452
Cow position: chrX:25573301-25573695 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 233

Conread position: 73-573
Cow position: chrX:3418188-3417663 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 74-264
Cow position: chrX:24928393-24928191 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 75-277
Cow position: chrX:21750292-21750081 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 119

Conread position: 75-512
Cow position: chrX:29700991-29700543 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 71

Conread position: 85-261
Cow position: chrX:28766142-28765960 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 109, 19

Conread position: 86-412
Cow position: chrX:22308605-22308266 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 74

Conread position: 86-461
Cow position: chrX:38217941-38218345 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 273
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 74

Conread position: 86-570
Cow position: chrX:27095098-27095590 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 95

Conread position: 86-571
Cow position: chrX:35608955-35609458 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 100

Conread position: 87-531
Cow position: chrX:13031688-13031232 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 319
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 181

Conread position: 87-577
Cow position: chrX:2649388-2648883 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 328

Conread position: 93-341
Cow position: chrX:3144598-3144857 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 93-536
Cow position: chrX:13205923-13206387 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 201

Conread position: 95-484
Cow position: chrX:28867042-28866634 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 270
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 106, 336

Conread position: 100-571
Cow position: chrX:2486654-2486158 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 102-571
Cow position: chrX:37117887-37118369 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 302

Conread position: 106-254
Cow position: chrX:2933018-2932861 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 106-333
Cow position: chrX:12651833-12651600 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 88, 36

Conread position: 106-487
Cow position: chrX:29892071-29892472 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 88, 378

Conread position: 106-559
Cow position: chrX:1056403-1055933 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 311

Conread position: 106-570
Cow position: chrX:5280868-5280382 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 185

Conread position: 106-570
Cow position: chrX:39731153-39730668 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 185

Conread position: 106-573
Cow position: chrX:41734199-41733721 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 95

Conread position: 106-577
Cow position: chrX:18455786-18455304 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 51

Conread position: 110-340
Cow position: chrX:21626710-21626473 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 76, 0

Conread position: 115-540
Cow position: chrX:30135349-30134914 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 295
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 80, 222

Conread position: 117-573
Cow position: chrX:2293605-2293126 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 119-571
Cow position: chrX:29842181-29841697 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 121-562
Cow position: chrX:44053815-44054264 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 163

Conread position: 121-577
Cow position: chrX:17158808-17158350 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 46

Conread position: 129-571
Cow position: chrX:38330391-38330854 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 164

Conread position: 130-538
Cow position: chrX:39939745-39939317 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 309

Conread position: 130-562
Cow position: chrX:3211528-3211084 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 161

Conread position: 131-562
Cow position: chrX:16046157-16046608 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 23

Conread position: 131-562
Cow position: chrX:21254788-21255237 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 136-433
Cow position: chrX:150494-150802 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 88, 36

Conread position: 136-533
Cow position: chrX:21063489-21063903 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 19

Conread position: 136-570
Cow position: chrX:5392561-5392104 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 136-571
Cow position: chrX:30196312-30196769 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 155

Conread position: 136-571
Cow position: chrX:44874486-44874062 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 155

Conread position: 144-571
Cow position: chrX:28156562-28157007 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 27

Conread position: 145-333
Cow position: chrX:3827690-3827887 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 149-577
Cow position: chrX:39701896-39702328 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 39

Conread position: 150-558
Cow position: chrX:22601382-22600958 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 283
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 291

Conread position: 150-573
Cow position: chrX:37832426-37831998 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 48

Conread position: 152-577
Cow position: chrX:6766704-6766267 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 247

Conread position: 154-562
Cow position: chrX:42466958-42466563 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 11

Conread position: 156-525
Cow position: chrX:23415661-23415271 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 296

Conread position: 157-394
Cow position: chrX:20790505-20790253 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 235

Conread position: 162-576
Cow position: chrX:17793895-17794306 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 129

Conread position: 163-562
Cow position: chrX:15113713-15114132 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 163-571
Cow position: chrX:35239913-35240336 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 171-570
Cow position: chrX:5124310-5123888 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 174-577
Cow position: chrX:16021323-16020906 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 225

Conread position: 185-573
Cow position: chrX:28313494-28313899 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 186-571
Cow position: chrX:24174091-24173693 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 265
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 247

Conread position: 201-571
Cow position: chrX:865477-865868 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 205-570
Cow position: chrX:14162277-14162663 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 212-577
Cow position: chrX:40268579-40268954 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 110

Conread position: 218-577
Cow position: chrX:35388815-35388432 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 328

Conread position: 219-547
Cow position: chrX:30086194-30085866 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 5

Conread position: 219-573
Cow position: chrX:29876950-29876587 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 117, 5

Conread position: 221-526
Cow position: chrX:24006721-24006404 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 29, 36

Conread position: 221-562
Cow position: chrX:17265928-17265586 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 237
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 23

Conread position: 221-571
Cow position: chrX:18898542-18898178 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 353

Conread position: 221-571
Cow position: chrX:24442132-24441767 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 223-570
Cow position: chrX:45903287-45903648 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 112, 0

Conread position: 223-571
Cow position: chrX:40581053-40580691 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 223-577
Cow position: chrX:40365635-40365266 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 224-517
Cow position: chrX:23969465-23969767 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 111, 69

Conread position: 224-543
Cow position: chrX:39293107-39292776 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 111, 315

Conread position: 224-550
Cow position: chrX:10440715-10440385 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 229
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 46, 59

Conread position: 224-558
Cow position: chrX:31372573-31372919 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 143

Conread position: 224-562
Cow position: chrX:25459528-25459178 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 0

Conread position: 224-570
Cow position: chrX:2159876-2160236 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 224-570
Cow position: chrX:5406172-5406531 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 111, 17

Conread position: 224-570
Cow position: chrX:11566025-11566385 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position: chrX:13031100-13030740 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position: chrX:14459056-14458696 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 224-570
Cow position: chrX:15091653-15091298 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position: chrX:19109930-19109570 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-570
Cow position: chrX:45658966-45658604 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 74, 55

Conread position: 224-571
Cow position: chrX:27704710-27705065 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 309

Conread position: 224-571
Cow position: chrX:34518837-34519198 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-571
Cow position: chrX:45236577-45236938 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-573
Cow position: chrX:13912204-13912570 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 256
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 112, 232

Conread position: 224-573
Cow position: chrX:36479524-36479161 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-577
Cow position: chrX:7805492-7805854 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 91

Conread position: 224-577
Cow position: chrX:26974021-26974388 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 224-577
Cow position: chrX:27628964-27629328 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 224-577
Cow position: chrX:38935533-38935904 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 257
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 113, 277

Conread position: 225-394
Cow position: chrX:13414693-13414518 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 117, 31

Conread position: 225-571
Cow position: chrX:29722344-29722687 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 117, 52

Conread position: 228-577
Cow position: chrX:1729742-1729384 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 70, 20

Conread position: 229-523
Cow position: chrX:24425399-24425093 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 229-577
Cow position: chrX:29875882-29875524 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 254
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 68, 27

Conread position: 231-570
Cow position: chrX:20032713-20032360 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 236-559
Cow position: chrX:35847348-35847682 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 273

Conread position: 236-571
Cow position: chrX:19657620-19657969 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 236-573
Cow position: chrX:30422012-30421674 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 100, 40

Conread position: 237-498
Cow position: chrX:9535890-9536157 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 98, 61

Conread position: 237-577
Cow position: chrX:9837255-9837596 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 50

Conread position: 238-573
Cow position: chrX:37488854-37489200 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 242-532
Cow position: chrX:8104152-8103867 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 95, 148

Conread position: 247-562
Cow position: chrX:2274054-2274378 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 90, 204

Conread position: 248-553
Cow position: chrX:16552943-16553244 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 8

Conread position: 249-571
Cow position: chrX:21667166-21666841 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 37, 7

Conread position: 251-573
Cow position: chrX:30824784-30825122 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 252-476
Cow position: chrX:33827900-33827657 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 256-570
Cow position: chrX:34253372-34253700 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 225
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 79, 0

Conread position: 256-571
Cow position: chrX:38140894-38140571 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 313

Conread position: 260-577
Cow position: chrX:22871267-22871590 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 223
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 77, 115

Conread position: 266-543
Cow position: chrX:40788288-40788576 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 18

Conread position: 273-562
Cow position: chrX:12033758-12033462 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 62, 21

Conread position: 273-573
Cow position: chrX:34719673-34719987 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 287-573
Cow position: chrX:11083432-11083136 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 166

Conread position: 287-577
Cow position: chrX:34990237-34990539 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 290-562
Cow position: chrX:2763749-2764025 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 101

Conread position: 291-549
Cow position: chrX:16517954-16517684 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 294-558
Cow position: chrX:37363904-37364179 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 294-573
Cow position: chrX:18451898-18451605 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.