Cow genome map

Conread name: rpigcb_12369.y1

Conread position: 1-316
Cow position:
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 68

Conread position: 3-161
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 3-189
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 3-252
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 59, 125

Conread position: 3-304
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 63, 123

Conread position: 3-308
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 87

Conread position: 3-311
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 64, 104

Conread position: 3-312
Cow position:
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 189

Conread position: 3-313
Cow position:
Alignm length: 316
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 256

Conread position: 3-314
Cow position:
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 112

Conread position: 3-315
Cow position:
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 83

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 50, 256

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 64, 143

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 75

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 48

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 211
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 120

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 52

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 164

Conread position: 3-316
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 168

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 76

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 222
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 98, 61

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 48, 136

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 213
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 48, 136

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 254

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 221

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 22

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 124

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 156

Conread position: 10-135
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 10-298
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 56, 246

Conread position: 10-312
Cow position:
Alignm length: 307
Alignm identity: 207
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 56, 246

Conread position: 10-315
Cow position:
Alignm length: 309
Alignm identity: 212
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 212
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 56, 0

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 312
Alignm identity: 216
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 57, 248

Conread position: 10-316
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 57, 186

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 212
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 312
Alignm identity: 215
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 56, 246

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 59, 0

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 12-146
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 132

Conread position: 12-158
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 57, 107

Conread position: 12-163
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 12-184
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 24, 19

Conread position: 12-225
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 54, 96

Conread position: 12-240
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 53, 27

Conread position: 12-266
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 246

Conread position: 12-266
Cow position:
Alignm length: 257
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 114

Conread position: 12-308
Cow position:
Alignm length: 304
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 258, 40

Conread position: 12-308
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 128

Conread position: 12-308
Cow position:
Alignm length: 305
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 19

Conread position: 12-308
Cow position:
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 28

Conread position: 12-312
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 189

Conread position: 12-313
Cow position:
Alignm length: 306
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 246

Conread position: 12-315
Cow position:
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 52

Conread position: 12-315
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 144, 40

Conread position: 12-315
Cow position:
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 52

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 57, 248

Conread position: 12-316
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 244, 52

Conread position: 12-316
Cow position:
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 53

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 54

Conread position: 12-316
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 57

Conread position: 12-316
Cow position:
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 43

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 57, 113

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 26

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 151

Conread position: 13-215
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 13-233
Cow position:
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 40

Conread position: 13-265
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 53, 128

Conread position: 13-316
Cow position:
Alignm length: 306
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 257, 21

Conread position: 14-155
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 14-312
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 53, 156

Conread position: 14-316
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 256, 52

Conread position: 14-316
Cow position:
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 50

Conread position: 17-246
Cow position:
Alignm length: 230
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 19-316
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 239

Conread position: 20-316
Cow position:
Alignm length: 301
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 238

Conread position: 21-316
Cow position:
Alignm length: 300
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 116

Conread position: 34-316
Cow position:
Alignm length: 287
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 161

Conread position: 35-316
Cow position:
Alignm length: 293
Alignm identity: 199
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 92

Conread position: 38-314
Cow position:
Alignm length: 280
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 96

Conread position: 38-316
Cow position:
Alignm length: 286
Alignm identity: 192
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 143

Conread position: 38-316
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 128

Conread position: 41-316
Cow position:
Alignm length: 277
Alignm identity: 192
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 207, 84

Conread position: 50-316
Cow position:
Alignm length: 272
Alignm identity: 196
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 19, 161

Conread position: 52-316
Cow position:
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 81

Conread position: 66-313
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 66-316
Cow position:
Alignm length: 253
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 120

Conread position: 66-316
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 199, 33

Conread position: 76-316
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 194, 173

Conread position: 77-315
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 81, 215

Conread position: 82-308
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 85, 0

Conread position: 82-316
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 188, 72

Conread position: 82-316
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 190, 94

Conread position: 84-316
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 91-316
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 167

Conread position: 93-312
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 173, 44

Conread position: 119-316
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 147, 137

Conread position: 120-316
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 145, 136

Conread position: 120-316
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 137, 0

Conread position: 121-313
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 149, 9

Conread position: 121-316
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 136, 0

Conread position: 121-316
Cow position:
Alignm length: 198
Alignm identity: 157
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 149, 135

Conread position: 134-316
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 132, 68

Conread position: 139-304
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 139-316
Cow position:
Alignm length: 179
Alignm identity: 141
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 118, 0

Conread position: 140-312
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 116

Conread position: 140-312
Cow position:
Alignm length: 175
Alignm identity: 138
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 129, 116

Conread position: 140-316
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 116, 0

Conread position: 140-316
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 143-316
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 43

Conread position: 150-315
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 119, 107

Conread position: 157-308
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 101

Conread position: 167-316
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 23, 94

Show alignments to all cow chromosomes.