Cow genome map

Conread name: rpigcb_12369.y1

Conread position: 1-316
Cow position:
Alignm length: 333
Alignm identity: 240
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 66, 124

Conread position: 1-316
Cow position:
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 63

Conread position: 1-316
Cow position:
Alignm length: 325
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 65, 12

Conread position: 2-251
Cow position:
Alignm length: 253
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 124

Conread position: 3-151
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 119, 60

Conread position: 3-152
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 3-158
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 106, 60

Conread position: 3-197
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 63, 105

Conread position: 3-209
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 38

Conread position: 3-224
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 0

Conread position: 3-226
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 3-252
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 166

Conread position: 3-308
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 254, 42

Conread position: 3-311
Cow position:
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 253

Conread position: 3-312
Cow position:
Alignm length: 314
Alignm identity: 217
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 64, 25

Conread position: 3-312
Cow position:
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 129

Conread position: 3-313
Cow position:
Alignm length: 313
Alignm identity: 210
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 266, 61

Conread position: 3-315
Cow position:
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 30

Conread position: 3-315
Cow position:
Alignm length: 315
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 254, 14

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 130

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 155

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 221
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 64, 36

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 201

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 138

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 256

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 49

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 112

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 64, 129

Conread position: 3-316
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 257

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 64, 88

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 48

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 73

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 61

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 120

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 66, 171

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 66, 101

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 61

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 29

Conread position: 5-316
Cow position:
Alignm length: 315
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 62, 0

Conread position: 7-316
Cow position:
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 263

Conread position: 8-316
Cow position:
Alignm length: 312
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 146

Conread position: 9-205
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 9-315
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 154, 126

Conread position: 10-311
Cow position:
Alignm length: 305
Alignm identity: 203
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 10-312
Cow position:
Alignm length: 306
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 248

Conread position: 10-316
Cow position:
Alignm length: 311
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 209
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 142

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 211
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 308
Alignm identity: 219
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 258, 54

Conread position: 11-185
Cow position:
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 12-136
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 12-141
Cow position:
Alignm length: 131
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 12-158
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 12-215
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 54, 113

Conread position: 12-231
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 12-245
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 54, 114

Conread position: 12-300
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 54, 113

Conread position: 12-308
Cow position:
Alignm length: 305
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 141

Conread position: 12-311
Cow position:
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 158

Conread position: 12-312
Cow position:
Alignm length: 306
Alignm identity: 221
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 20

Conread position: 12-312
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 125

Conread position: 12-313
Cow position:
Alignm length: 306
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 225

Conread position: 12-313
Cow position:
Alignm length: 306
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 275

Conread position: 12-314
Cow position:
Alignm length: 306
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 12-315
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 63

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 246

Conread position: 12-316
Cow position:
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 248

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 115

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 52

Conread position: 12-316
Cow position:
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 115

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 119, 35

Conread position: 12-316
Cow position:
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 12-316
Cow position:
Alignm length: 312
Alignm identity: 215
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 53, 39

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 110, 43

Conread position: 12-316
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 241

Conread position: 12-316
Cow position:
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 131

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 64

Conread position: 12-316
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 133, 52

Conread position: 12-316
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 154, 51

Conread position: 12-316
Cow position:
Alignm length: 326
Alignm identity: 228
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 70, 52

Conread position: 12-316
Cow position:
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 13-316
Cow position:
Alignm length: 320
Alignm identity: 218
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 137, 18

Conread position: 13-316
Cow position:
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 14-161
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 49

Conread position: 14-312
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 174

Conread position: 14-316
Cow position:
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 246

Conread position: 14-316
Cow position:
Alignm length: 316
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 110

Conread position: 14-316
Cow position:
Alignm length: 312
Alignm identity: 223
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 90, 48

Conread position: 20-316
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 26-316
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 41, 232

Conread position: 31-302
Cow position:
Alignm length: 276
Alignm identity: 198
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 38, 7

Conread position: 34-312
Cow position:
Alignm length: 283
Alignm identity: 206
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 71

Conread position: 35-315
Cow position:
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 29

Conread position: 36-316
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 99, 11

Conread position: 43-316
Cow position:
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 53-316
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 14, 74

Conread position: 66-316
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 135, 0

Conread position: 70-316
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 186, 89

Conread position: 76-316
Cow position:
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 102

Conread position: 82-316
Cow position:
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 88-316
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 70, 147

Conread position: 88-316
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 37, 176

Conread position: 90-315
Cow position:
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 134

Conread position: 92-316
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 50

Conread position: 99-316
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 64, 40

Conread position: 107-316
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 18

Conread position: 114-316
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 11

Conread position: 119-316
Cow position:
Alignm length: 201
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 97, 103

Conread position: 121-312
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 149, 99

Conread position: 127-316
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 109, 51

Conread position: 132-316
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 137, 76

Conread position: 138-313
Cow position:
Alignm length: 178
Alignm identity: 144
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 132, 87

Conread position: 139-316
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 130, 117

Conread position: 140-314
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 140-316
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 129, 117

Conread position: 140-316
Cow position:
Alignm length: 181
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 116, 17

Conread position: 142-316
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 128, 114

Conread position: 145-316
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 112

Conread position: 150-316
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 32

Conread position: 151-316
Cow position:
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 119, 105

Conread position: 154-315
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 115, 7

Conread position: 161-316
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 108, 88

Conread position: 161-316
Cow position:
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 95

Conread position: 162-304
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 95

Conread position: 171-315
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Show alignments to all cow chromosomes.