Cow genome map

Conread name: rpigcb_12369.y1

Conread position: 1-259
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 149, 43

Conread position: 2-154
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 3-148
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 3-158
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 63, 96

Conread position: 3-173
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 63, 121

Conread position: 3-177
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 3-233
Cow position:
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 143

Conread position: 3-266
Cow position:
Alignm length: 264
Alignm identity: 179
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 121, 0

Conread position: 3-286
Cow position:
Alignm length: 288
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 48

Conread position: 3-289
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 116

Conread position: 3-307
Cow position:
Alignm length: 305
Alignm identity: 218
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 29, 0

Conread position: 3-313
Cow position:
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 46

Conread position: 3-315
Cow position:
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 3-316
Cow position:
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 3-316
Cow position:
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 259

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 236

Conread position: 3-316
Cow position:
Alignm length: 314
Alignm identity: 221
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 56, 0

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 64, 77

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 64, 239

Conread position: 3-316
Cow position:
Alignm length: 322
Alignm identity: 219
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 64, 124

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 217
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 43, 113

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 168

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 222
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 211, 51

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 46

Conread position: 3-316
Cow position:
Alignm length: 327
Alignm identity: 233
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 152, 63

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 144

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 232
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 15

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 253

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 234
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 267, 12

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 28

Conread position: 3-316
Cow position:
Alignm length: 325
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 48

Conread position: 4-252
Cow position:
Alignm length: 251
Alignm identity: 186
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 157, 59

Conread position: 4-315
Cow position:
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 56

Conread position: 4-316
Cow position:
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 91

Conread position: 4-316
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 252, 61

Conread position: 4-316
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 6-316
Cow position:
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 7-316
Cow position:
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 249

Conread position: 9-303
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 254

Conread position: 10-302
Cow position:
Alignm length: 296
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 10-316
Cow position:
Alignm length: 307
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 24

Conread position: 12-155
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 54, 20

Conread position: 12-174
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 54, 99

Conread position: 12-200
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 54, 180

Conread position: 12-205
Cow position:
Alignm length: 196
Alignm identity: 144
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 54, 135

Conread position: 12-217
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 159

Conread position: 12-223
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 54, 19

Conread position: 12-232
Cow position:
Alignm length: 222
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 174, 181

Conread position: 12-252
Cow position:
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 107

Conread position: 12-266
Cow position:
Alignm length: 255
Alignm identity: 180
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 124, 0

Conread position: 12-308
Cow position:
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-311
Cow position:
Alignm length: 304
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-312
Cow position:
Alignm length: 304
Alignm identity: 210
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 54, 33

Conread position: 12-313
Cow position:
Alignm length: 306
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 164

Conread position: 12-313
Cow position:
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 173

Conread position: 12-313
Cow position:
Alignm length: 305
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 55, 20

Conread position: 12-313
Cow position:
Alignm length: 305
Alignm identity: 210
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 165, 37

Conread position: 12-315
Cow position:
Alignm length: 312
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 20

Conread position: 12-315
Cow position:
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 7

Conread position: 12-315
Cow position:
Alignm length: 326
Alignm identity: 226
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 46, 254

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 115

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 213
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 241, 52

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 52

Conread position: 12-316
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 54, 107

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 207

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 110

Conread position: 12-316
Cow position:
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 110

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 213
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 132, 243

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 20

Conread position: 12-316
Cow position:
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 12-316
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 236

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 219
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 54, 39

Conread position: 12-316
Cow position:
Alignm length: 312
Alignm identity: 220
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 58, 22

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 103

Conread position: 12-316
Cow position:
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 248

Conread position: 14-208
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 18-313
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 248, 0

Conread position: 19-315
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 140

Conread position: 19-316
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 127, 45

Conread position: 21-308
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 44

Conread position: 30-311
Cow position:
Alignm length: 292
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 35-316
Cow position:
Alignm length: 286
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 32, 86

Conread position: 35-316
Cow position:
Alignm length: 284
Alignm identity: 194
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 32, 63

Conread position: 37-316
Cow position:
Alignm length: 283
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 38-314
Cow position:
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 26

Conread position: 38-316
Cow position:
Alignm length: 283
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 220

Conread position: 41-316
Cow position:
Alignm length: 280
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 140

Conread position: 45-316
Cow position:
Alignm length: 274
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 52-316
Cow position:
Alignm length: 267
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 122

Conread position: 53-316
Cow position:
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 71

Conread position: 53-316
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 74

Conread position: 58-316
Cow position:
Alignm length: 269
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 5, 45

Conread position: 66-301
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 66-316
Cow position:
Alignm length: 253
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 191

Conread position: 67-316
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 189, 98

Conread position: 67-316
Cow position:
Alignm length: 251
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 58

Conread position: 68-316
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 189

Conread position: 76-304
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 196, 117

Conread position: 76-313
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 194, 180

Conread position: 76-314
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 130, 182

Conread position: 76-316
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 180, 96

Conread position: 82-316
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 31

Conread position: 83-316
Cow position:
Alignm length: 235
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 48

Conread position: 83-316
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 85-316
Cow position:
Alignm length: 234
Alignm identity: 177
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 184, 87

Conread position: 85-316
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 182, 171

Conread position: 88-314
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 127, 66

Conread position: 90-316
Cow position:
Alignm length: 229
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 35

Conread position: 92-316
Cow position:
Alignm length: 226
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 33

Conread position: 92-316
Cow position:
Alignm length: 227
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 165

Conread position: 108-315
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 162, 57

Conread position: 117-316
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 152, 31

Conread position: 119-316
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 151, 32

Conread position: 124-316
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 152

Conread position: 140-316
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 130, 116

Conread position: 140-316
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 127, 116

Conread position: 140-316
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 129, 116

Conread position: 140-316
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 118

Conread position: 144-313
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 119, 113

Conread position: 157-313
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 99

Conread position: 157-316
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 115, 100

Conread position: 159-316
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 107, 9

Conread position: 161-312
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 59

Conread position: 161-316
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 111, 23

Conread position: 165-316
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 18

Conread position: 166-316
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 103, 91

Show alignments to all cow chromosomes.