Cow genome map

Conread name: rpigcb_12369.y1

Conread position: 1-227
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 64, 12

Conread position: 1-316
Cow position:
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 12

Conread position: 1-316
Cow position:
Alignm length: 320
Alignm identity: 212
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 1-316
Cow position:
Alignm length: 321
Alignm identity: 219
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 5, 256

Conread position: 2-311
Cow position:
Alignm length: 313
Alignm identity: 219
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 181, 45

Conread position: 3-176
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 97

Conread position: 3-252
Cow position:
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 48

Conread position: 3-252
Cow position:
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 62

Conread position: 3-295
Cow position:
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 60

Conread position: 3-307
Cow position:
Alignm length: 307
Alignm identity: 216
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 263, 60

Conread position: 3-308
Cow position:
Alignm length: 310
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 3-312
Cow position:
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 60

Conread position: 3-312
Cow position:
Alignm length: 312
Alignm identity: 229
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 266, 32

Conread position: 3-312
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 60

Conread position: 3-313
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 3-313
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 64, 16

Conread position: 3-315
Cow position:
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 122

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 266, 31

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 64, 166

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 218
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 35

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 120

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 55

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 60

Conread position: 3-316
Cow position:
Alignm length: 314
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 3-316
Cow position:
Alignm length: 321
Alignm identity: 210
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 245, 61

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 63, 146

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 129

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 64, 256

Conread position: 3-316
Cow position:
Alignm length: 331
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 64, 53

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 64

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 211
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 66, 185

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 32

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 214
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 66, 138

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 64, 184

Conread position: 4-316
Cow position:
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 59

Conread position: 6-246
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 60, 168

Conread position: 10-146
Cow position:
Alignm length: 137
Alignm identity: 112
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 10-222
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 29

Conread position: 10-308
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 143

Conread position: 10-316
Cow position:
Alignm length: 311
Alignm identity: 216
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 38, 66

Conread position: 10-316
Cow position:
Alignm length: 311
Alignm identity: 208
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 55

Conread position: 10-316
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 59

Conread position: 12-134
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 12-151
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 12-161
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 54, 126

Conread position: 12-202
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 12-233
Cow position:
Alignm length: 228
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 12-308
Cow position:
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 247

Conread position: 12-308
Cow position:
Alignm length: 301
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-308
Cow position:
Alignm length: 302
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-308
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 40

Conread position: 12-308
Cow position:
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 52

Conread position: 12-312
Cow position:
Alignm length: 305
Alignm identity: 204
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 246

Conread position: 12-313
Cow position:
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 11

Conread position: 12-313
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 12-314
Cow position:
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 111

Conread position: 12-314
Cow position:
Alignm length: 317
Alignm identity: 211
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 53, 116

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 70

Conread position: 12-316
Cow position:
Alignm length: 314
Alignm identity: 215
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 141, 112

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 12-316
Cow position:
Alignm length: 310
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 103

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 52

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 247

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 68

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 245, 52

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 106

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 55

Conread position: 12-316
Cow position:
Alignm length: 312
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 251

Conread position: 12-316
Cow position:
Alignm length: 311
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 24

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 243

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 244

Conread position: 12-316
Cow position:
Alignm length: 310
Alignm identity: 216
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 13, 57

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 26

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position:
Alignm length: 314
Alignm identity: 215
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 17, 148

Conread position: 12-316
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 29

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 123

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 12-316
Cow position:
Alignm length: 306
Alignm identity: 207
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 245, 52

Conread position: 13-316
Cow position:
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 243

Conread position: 14-211
Cow position:
Alignm length: 198
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 14-316
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 244

Conread position: 14-316
Cow position:
Alignm length: 322
Alignm identity: 226
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 55, 18

Conread position: 19-316
Cow position:
Alignm length: 302
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 239

Conread position: 22-312
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 248

Conread position: 38-304
Cow position:
Alignm length: 271
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 29, 89

Conread position: 38-316
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 113

Conread position: 39-316
Cow position:
Alignm length: 286
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 227, 84

Conread position: 49-316
Cow position:
Alignm length: 270
Alignm identity: 193
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 221, 15

Conread position: 66-316
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 204, 106

Conread position: 82-315
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 85, 52

Conread position: 82-316
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 175

Conread position: 109-314
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 140, 0

Conread position: 121-316
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 149, 135

Conread position: 125-316
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 145, 133

Conread position: 140-304
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 140-316
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 129, 116

Conread position: 142-316
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 114, 44

Conread position: 148-316
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 121, 109

Conread position: 150-316
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 7

Conread position: 154-316
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 154-316
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 157-316
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 112, 56

Conread position: 160-308
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 106, 96

Conread position: 164-316
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 92

Conread position: 186-316
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 84, 71

Show alignments to all cow chromosomes.