Cow genome map

Conread name: rpigcb_12369.y1

Conread position: 1-316
Cow position:
Alignm length: 318
Alignm identity: 232
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 269, 12

Conread position: 1-316
Cow position:
Alignm length: 320
Alignm identity: 223
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 64, 50

Conread position: 2-315
Cow position:
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 62

Conread position: 2-316
Cow position:
Alignm length: 332
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 221

Conread position: 2-316
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 30

Conread position: 3-158
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 3-158
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 115

Conread position: 3-166
Cow position:
Alignm length: 166
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 105

Conread position: 3-201
Cow position:
Alignm length: 202
Alignm identity: 154
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 59, 96

Conread position: 3-232
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 157, 60

Conread position: 3-233
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 114

Conread position: 3-280
Cow position:
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 60

Conread position: 3-287
Cow position:
Alignm length: 287
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 49

Conread position: 3-289
Cow position:
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 3-289
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 167

Conread position: 3-302
Cow position:
Alignm length: 312
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 29

Conread position: 3-308
Cow position:
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 29

Conread position: 3-313
Cow position:
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 61

Conread position: 3-313
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 94

Conread position: 3-315
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-315
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 159, 28

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 61

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 67, 30

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position:
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 29

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 249, 52

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 55, 61

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 253, 35

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 256

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 60

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 28

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 253

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 216
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 263, 61

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 223
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 35, 96

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 139

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 183

Conread position: 4-316
Cow position:
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 86

Conread position: 4-316
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 127, 60

Conread position: 4-316
Cow position:
Alignm length: 322
Alignm identity: 214
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 125, 48

Conread position: 9-316
Cow position:
Alignm length: 317
Alignm identity: 224
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 57, 196

Conread position: 10-316
Cow position:
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 35

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 11-313
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 11, 0

Conread position: 12-170
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 51

Conread position: 12-178
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 12-216
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 28

Conread position: 12-284
Cow position:
Alignm length: 278
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 248

Conread position: 12-286
Cow position:
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 237

Conread position: 12-289
Cow position:
Alignm length: 282
Alignm identity: 203
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 20

Conread position: 12-308
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 102

Conread position: 12-308
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 273

Conread position: 12-311
Cow position:
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 86

Conread position: 12-311
Cow position:
Alignm length: 305
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 16

Conread position: 12-312
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 52

Conread position: 12-312
Cow position:
Alignm length: 303
Alignm identity: 208
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 260, 52

Conread position: 12-313
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-313
Cow position:
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 53

Conread position: 12-313
Cow position:
Alignm length: 302
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 12-315
Cow position:
Alignm length: 306
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 51

Conread position: 12-315
Cow position:
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 163

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 254, 52

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 163

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 53

Conread position: 12-316
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 43

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 197

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 113

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position:
Alignm length: 325
Alignm identity: 222
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 262

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position:
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 20

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 114

Conread position: 12-316
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 128, 55

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 51

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 216
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 254, 22

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 43

Conread position: 12-316
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 52

Conread position: 12-316
Cow position:
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 52

Conread position: 12-316
Cow position:
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 198

Conread position: 12-316
Cow position:
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 240

Conread position: 13-316
Cow position:
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 51

Conread position: 14-315
Cow position:
Alignm length: 305
Alignm identity: 222
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 191, 39

Conread position: 14-316
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 53, 130

Conread position: 16-288
Cow position:
Alignm length: 277
Alignm identity: 196
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 50, 110

Conread position: 19-316
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 239

Conread position: 19-316
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 218, 44

Conread position: 19-316
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 48, 239

Conread position: 19-316
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 47, 239

Conread position: 20-313
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 238

Conread position: 21-282
Cow position:
Alignm length: 264
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 248, 43

Conread position: 30-316
Cow position:
Alignm length: 291
Alignm identity: 208
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 6, 69

Conread position: 34-316
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 10, 44

Conread position: 38-316
Cow position:
Alignm length: 292
Alignm identity: 213
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 123, 93

Conread position: 38-316
Cow position:
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 39-316
Cow position:
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 39-316
Cow position:
Alignm length: 282
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 219

Conread position: 41-316
Cow position:
Alignm length: 281
Alignm identity: 200
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 26, 40

Conread position: 42-316
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 58

Conread position: 55-316
Cow position:
Alignm length: 271
Alignm identity: 188
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 105, 9

Conread position: 66-316
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 75-316
Cow position:
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 50

Conread position: 75-316
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 197, 78

Conread position: 75-316
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 89

Conread position: 78-316
Cow position:
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 82-316
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 20, 0

Conread position: 82-316
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 188, 175

Conread position: 106-316
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 163, 32

Conread position: 119-312
Cow position:
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 0

Conread position: 119-316
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 138, 0

Conread position: 122-316
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 148, 134

Conread position: 125-316
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 128, 0

Conread position: 133-316
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 136, 123

Conread position: 140-316
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 140-316
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 142-316
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 113

Conread position: 150-316
Cow position:
Alignm length: 169
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 150-316
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 119, 107

Conread position: 154-316
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 115, 10

Conread position: 161-316
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 104

Conread position: 165-316
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 105, 93

Conread position: 168-316
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 169-316
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 88

Conread position: 170-316
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 87

Show alignments to all cow chromosomes.