Cow genome map


           Conread name:
           rpigcb_12369.y1
        

               Conread position:
               1-316
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 126
               

               Conread position:
               2-201
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               2-314
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               93, 62
               

               Conread position:
               3-149
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               3-152
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               59, 119
               

               Conread position:
               3-155
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               3-186
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 112
               

               Conread position:
               3-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               62, 171
               

               Conread position:
               3-233
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 158
               

               Conread position:
               3-286
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 167
               

               Conread position:
               3-310
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 269
               

               Conread position:
               3-311
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               3-313
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 99
               

               Conread position:
               3-313
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 255
               

               Conread position:
               3-313
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 238
               

               Conread position:
               3-314
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               213, 67
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 32
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 52
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               64, 156
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 255
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               64, 52
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               203, 54
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 49
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 29
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               64, 164
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 255
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 61
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 105
               

               Conread position:
               3-316
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               64, 112
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               244, 101
               

               Conread position:
               4-316
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 62
               

               Conread position:
               7-313
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 33
               

               Conread position:
               10-316
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               10-316
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 13
               

               Conread position:
               12-150
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               12-150
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 114
               

               Conread position:
               12-151
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               12-154
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               12-154
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 19
               

               Conread position:
               12-166
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               12-232
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               12-233
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               12-295
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               12-303
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               12-308
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               12-312
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               12-312
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 35
               

               Conread position:
               12-313
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 120
               

               Conread position:
               12-314
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 127
               

               Conread position:
               12-315
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               54, 210
               

               Conread position:
               12-315
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 114
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               79, 11
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 52
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 23
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 37
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 161
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 115
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               49, 17
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 45
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               55, 246
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               183, 35
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               257, 45
               

               Conread position:
               12-316
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               46, 115
               

               Conread position:
               13-266
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               149, 113
               

               Conread position:
               13-313
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               201, 19
               

               Conread position:
               13-313
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 32
               

               Conread position:
               14-170
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 64
               

               Conread position:
               14-315
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 17
               

               Conread position:
               16-152
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 109
               

               Conread position:
               18-316
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               251, 40
               

               Conread position:
               18-316
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               48, 261
               

               Conread position:
               18-316
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               144, 13
               

               Conread position:
               19-316
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               48, 137
               

               Conread position:
               30-316
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 19
               

               Conread position:
               41-315
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 23
               

               Conread position:
               66-316
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               164, 65
               

               Conread position:
               75-316
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 147
               

               Conread position:
               82-316
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 186
               

               Conread position:
               84-316
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               94-316
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               166, 57
               

               Conread position:
               111-316
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               119-316
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               137, 125
               

               Conread position:
               131-316
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               139, 125
               

               Conread position:
               138-313
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               129, 118
               

               Conread position:
               138-316
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               149, 34
               

               Conread position:
               139-316
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               128, 117
               

               Conread position:
               140-316
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               127, 116
               

               Conread position:
               147-308
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               122, 25
               

               Conread position:
               154-316
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               45, 108
               

               Conread position:
               154-316
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               157-313
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               113, 51
               

               Conread position:
               161-316
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               169-308
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               101, 87
               
Show alignments to all cow chromosomes.