Cow genome map
| Conread name: | rpigcb_12369.y1 |
| Conread position: | 1-316 |
| Cow position: | chr26:28398219-28397902 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 66, 107 |
| Conread position: | 3-154 |
| Cow position: | chr26:19842498-19842344 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 3-316 |
| Cow position: | chr26:3757699-3757383 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 62, 74 |
| Conread position: | 3-316 |
| Cow position: | chr26:6840555-6840864 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 267, 55 |
| Conread position: | 3-316 |
| Cow position: | chr26:6843077-6843386 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 267, 55 |
| Conread position: | 3-316 |
| Cow position: | chr26:8896981-8897298 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 3-316 |
| Cow position: | chr26:13774388-13774096 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 29 |
| Conread position: | 3-316 |
| Cow position: | chr26:15588520-15588830 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 106, 49 |
| Conread position: | 3-316 |
| Cow position: | chr26:16861526-16861841 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 129 |
| Conread position: | 3-316 |
| Cow position: | chr26:17328317-17328005 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 135 |
| Conread position: | 3-316 |
| Cow position: | chr26:17392964-17393273 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 267, 61 |
| Conread position: | 3-316 |
| Cow position: | chr26:18877912-18877598 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 3-316 |
| Cow position: | chr26:21539540-21539228 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 60 |
| Conread position: | 3-316 |
| Cow position: | chr26:21908818-21909133 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 3-316 |
| Cow position: | chr26:26670246-26670559 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 22, 136 |
| Conread position: | 3-316 |
| Cow position: | chr26:28237087-28236777 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 3-316 |
| Cow position: | chr26:28442105-28442417 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 29 |
| Conread position: | 3-316 |
| Cow position: | chr26:30585229-30585538 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 55 |
| Conread position: | 3-316 |
| Cow position: | chr26:30724464-30724782 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 64, 257 |
| Conread position: | 7-316 |
| Cow position: | chr26:3706705-3706399 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 159 |
| Conread position: | 9-313 |
| Cow position: | chr26:12807617-12807919 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 10-246 |
| Cow position: | chr26:20291784-20292018 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 10-312 |
| Cow position: | chr26:2730838-2730530 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 10-313 |
| Cow position: | chr26:23890548-23890241 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 10-316 |
| Cow position: | chr26:1391127-1390818 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 58, 248 |
| Conread position: | 10-316 |
| Cow position: | chr26:6466596-6466287 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 57, 268 |
| Conread position: | 10-316 |
| Cow position: | chr26:23592122-23591817 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 206, 54 |
| Conread position: | 12-155 |
| Cow position: | chr26:8745932-8746080 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 12-216 |
| Cow position: | chr26:6498156-6497950 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 12-222 |
| Cow position: | chr26:4585312-4585522 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 12-237 |
| Cow position: | chr26:13021249-13021477 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 12-266 |
| Cow position: | chr26:33112486-33112736 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 55, 86 |
| Conread position: | 12-304 |
| Cow position: | chr26:31701715-31701425 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 12-308 |
| Cow position: | chr26:14395339-14395634 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 12-315 |
| Cow position: | chr26:2531285-2531580 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 19 |
| Conread position: | 12-315 |
| Cow position: | chr26:3072066-3072371 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 12-316 |
| Cow position: | chr26:818569-818863 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 12-316 |
| Cow position: | chr26:7525572-7525880 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 161, 52 |
| Conread position: | 12-316 |
| Cow position: | chr26:8307615-8307920 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 54, 71 |
| Conread position: | 12-316 |
| Cow position: | chr26:14487214-14487521 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 246 |
| Conread position: | 12-316 |
| Cow position: | chr26:14898227-14897924 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 120 |
| Conread position: | 12-316 |
| Cow position: | chr26:15561075-15561376 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 15, 56 |
| Conread position: | 12-316 |
| Cow position: | chr26:22191388-22191084 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 92 |
| Conread position: | 12-316 |
| Cow position: | chr26:22830898-22831203 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 91 |
| Conread position: | 12-316 |
| Cow position: | chr26:30806612-30806919 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 20 |
| Conread position: | 12-316 |
| Cow position: | chr26:32381201-32380896 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 58, 114 |
| Conread position: | 12-316 |
| Cow position: | chr26:32776616-32776913 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 43 |
| Conread position: | 12-316 |
| Cow position: | chr26:32933632-32933325 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 55, 246 |
| Conread position: | 13-312 |
| Cow position: | chr26:9082339-9082630 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 19 |
| Conread position: | 13-315 |
| Cow position: | chr26:19447530-19447842 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 13-316 |
| Cow position: | chr26:32601248-32600944 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 14-313 |
| Cow position: | chr26:15857574-15857275 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 160 |
| Conread position: | 19-316 |
| Cow position: | chr26:11904568-11904271 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 28-316 |
| Cow position: | chr26:18799401-18799692 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 230 |
| Conread position: | 32-316 |
| Cow position: | chr26:31781824-31781543 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 36-316 |
| Cow position: | chr26:3187863-3187585 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 31, 49 |
| Conread position: | 36-316 |
| Cow position: | chr26:8405291-8405009 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 30, 92 |
| Conread position: | 37-316 |
| Cow position: | chr26:12890166-12889893 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 38-316 |
| Cow position: | chr26:16796359-16796628 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 38-316 |
| Cow position: | chr26:20059398-20059124 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 31, 136 |
| Conread position: | 41-316 |
| Cow position: | chr26:6714412-6714691 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 41-316 |
| Cow position: | chr26:35424612-35424335 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 95 |
| Conread position: | 42-316 |
| Cow position: | chr26:8820197-8820456 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 227, 28 |
| Conread position: | 45-312 |
| Cow position: | chr26:29227128-29227407 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 22, 222 |
| Conread position: | 45-315 |
| Cow position: | chr26:11338351-11338080 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 63-316 |
| Cow position: | chr26:14399148-14399411 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 66-316 |
| Cow position: | chr26:14291666-14291417 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 75-316 |
| Cow position: | chr26:12142514-12142766 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 76-313 |
| Cow position: | chr26:17180918-17181158 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 13, 183 |
| Conread position: | 82-312 |
| Cow position: | chr26:15348301-15348532 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 85-316 |
| Cow position: | chr26:30569056-30569287 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 87 |
| Conread position: | 88-298 |
| Cow position: | chr26:8306238-8306033 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 181, 43 |
| Conread position: | 94-316 |
| Cow position: | chr26:12964841-12965058 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 175, 30 |
| Conread position: | 95-308 |
| Cow position: | chr26:27930528-27930731 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 177, 29 |
| Conread position: | 122-316 |
| Cow position: | chr26:4875638-4875443 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 146-312 |
| Cow position: | chr26:694711-694873 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 154-315 |
| Cow position: | chr26:8810850-8810689 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 112, 82 |
Show alignments to all cow chromosomes.