Cow genome map

Conread name: rpigcb_12369.y1

Conread position: 1-316
Cow position:
Alignm length: 320
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 257

Conread position: 2-309
Cow position:
Alignm length: 315
Alignm identity: 222
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 65, 125

Conread position: 2-316
Cow position:
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 19

Conread position: 3-154
Cow position:
Alignm length: 154
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 3-188
Cow position:
Alignm length: 190
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 44

Conread position: 3-209
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 60, 125

Conread position: 3-244
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 238, 0

Conread position: 3-253
Cow position:
Alignm length: 257
Alignm identity: 175
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 3-283
Cow position:
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 3-307
Cow position:
Alignm length: 309
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 35

Conread position: 3-308
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 66, 12

Conread position: 3-313
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 54

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 174

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 249, 35

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 29

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 54, 103

Conread position: 3-316
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 171

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 62

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 256

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 30

Conread position: 3-316
Cow position:
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 49

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 252

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 153

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 221
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 64, 47

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 3-316
Cow position:
Alignm length: 325
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 174

Conread position: 4-280
Cow position:
Alignm length: 282
Alignm identity: 200
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 0

Conread position: 5-209
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 5-316
Cow position:
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 44

Conread position: 5-316
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 15

Conread position: 7-179
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 7-316
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 32

Conread position: 10-313
Cow position:
Alignm length: 311
Alignm identity: 212
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 26, 20

Conread position: 10-313
Cow position:
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 55

Conread position: 10-316
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 179

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 112

Conread position: 11-316
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 240, 66

Conread position: 12-154
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 114

Conread position: 12-180
Cow position:
Alignm length: 169
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 12-233
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 114, 0

Conread position: 12-239
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 12-266
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 54, 39

Conread position: 12-304
Cow position:
Alignm length: 297
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 89

Conread position: 12-311
Cow position:
Alignm length: 305
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 247

Conread position: 12-311
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 139, 243

Conread position: 12-313
Cow position:
Alignm length: 306
Alignm identity: 211
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 55, 144

Conread position: 12-313
Cow position:
Alignm length: 304
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 258, 37

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 51

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 247

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 215
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 50, 179

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 140

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 208
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 53, 178

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 247

Conread position: 12-316
Cow position:
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 8

Conread position: 12-316
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 110

Conread position: 12-316
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 55, 22

Conread position: 12-316
Cow position:
Alignm length: 306
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 52

Conread position: 12-316
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 51, 0

Conread position: 13-152
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 113

Conread position: 13-316
Cow position:
Alignm length: 308
Alignm identity: 224
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 54, 19

Conread position: 14-292
Cow position:
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 52

Conread position: 14-305
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 49

Conread position: 14-314
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 43

Conread position: 14-316
Cow position:
Alignm length: 304
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 50

Conread position: 14-316
Cow position:
Alignm length: 309
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 17

Conread position: 14-316
Cow position:
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 25

Conread position: 15-315
Cow position:
Alignm length: 303
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 53

Conread position: 16-315
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 51, 111

Conread position: 18-316
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 47

Conread position: 19-308
Cow position:
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 30

Conread position: 19-316
Cow position:
Alignm length: 303
Alignm identity: 207
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 48, 74

Conread position: 19-316
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 239

Conread position: 22-244
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 44, 100

Conread position: 30-316
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 6, 26

Conread position: 31-316
Cow position:
Alignm length: 292
Alignm identity: 200
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 5, 56

Conread position: 32-316
Cow position:
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 144

Conread position: 35-316
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 31, 135

Conread position: 37-316
Cow position:
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 89

Conread position: 42-312
Cow position:
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 29

Conread position: 43-316
Cow position:
Alignm length: 278
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 98

Conread position: 52-312
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 101, 12

Conread position: 53-316
Cow position:
Alignm length: 270
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 185

Conread position: 55-316
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 87, 9

Conread position: 76-316
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 189, 181

Conread position: 79-315
Cow position:
Alignm length: 239
Alignm identity: 181
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 190, 56

Conread position: 82-311
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 43

Conread position: 82-316
Cow position:
Alignm length: 238
Alignm identity: 177
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 22, 138

Conread position: 117-316
Cow position:
Alignm length: 202
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 148, 90

Conread position: 120-316
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 137, 93

Conread position: 121-292
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 128, 0

Conread position: 121-316
Cow position:
Alignm length: 198
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 149, 96

Conread position: 121-316
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 149, 135

Conread position: 121-316
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 149, 135

Conread position: 121-316
Cow position:
Alignm length: 199
Alignm identity: 153
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 149, 135

Conread position: 138-308
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 100

Conread position: 142-316
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 41

Conread position: 147-313
Cow position:
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 121, 7

Conread position: 151-312
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 154-316
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 0

Conread position: 157-316
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 109, 99

Conread position: 160-316
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 110, 96

Conread position: 164-316
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 101, 93

Conread position: 171-316
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 88

Show alignments to all cow chromosomes.