Cow genome map

Conread name: rpigcb_12369.y1

Conread position: 1-217
Cow position:
Alignm length: 219
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 1-316
Cow position:
Alignm length: 320
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 21

Conread position: 1-316
Cow position:
Alignm length: 322
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 91

Conread position: 2-316
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 268, 30

Conread position: 2-316
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 114

Conread position: 3-130
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 89, 60

Conread position: 3-145
Cow position:
Alignm length: 145
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 3-154
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 3-154
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 3-283
Cow position:
Alignm length: 285
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 3-308
Cow position:
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-312
Cow position:
Alignm length: 313
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 3-313
Cow position:
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 52

Conread position: 3-314
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 124

Conread position: 3-315
Cow position:
Alignm length: 318
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 155, 30

Conread position: 3-315
Cow position:
Alignm length: 316
Alignm identity: 220
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 62, 156

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 124

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 61

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 252

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 257

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 46

Conread position: 3-316
Cow position:
Alignm length: 320
Alignm identity: 231
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 64, 31

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 173

Conread position: 3-316
Cow position:
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 84

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 52

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 155

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 60

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 29

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 219
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 64, 112

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 224
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 69, 191

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 229
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 64, 36

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 63

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 32

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 23

Conread position: 5-205
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 153

Conread position: 5-308
Cow position:
Alignm length: 306
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 252

Conread position: 6-316
Cow position:
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 46

Conread position: 10-316
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 57

Conread position: 10-316
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 11-292
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 0

Conread position: 12-154
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 12-222
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 101, 0

Conread position: 12-308
Cow position:
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 40

Conread position: 12-311
Cow position:
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 115

Conread position: 12-312
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 189

Conread position: 12-313
Cow position:
Alignm length: 307
Alignm identity: 214
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 10, 166

Conread position: 12-315
Cow position:
Alignm length: 310
Alignm identity: 218
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 80, 52

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 20

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 246

Conread position: 12-316
Cow position:
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 220, 26

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 114

Conread position: 12-316
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 12-316
Cow position:
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 52

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 154

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 64, 129

Conread position: 12-316
Cow position:
Alignm length: 313
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 215

Conread position: 13-161
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 13-289
Cow position:
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 155

Conread position: 13-315
Cow position:
Alignm length: 321
Alignm identity: 223
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 50

Conread position: 13-315
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 50

Conread position: 13-316
Cow position:
Alignm length: 308
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 246

Conread position: 14-148
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 19-316
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 18

Conread position: 19-316
Cow position:
Alignm length: 304
Alignm identity: 211
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 48, 83

Conread position: 30-316
Cow position:
Alignm length: 296
Alignm identity: 205
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 6, 35

Conread position: 36-304
Cow position:
Alignm length: 271
Alignm identity: 199
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 231, 28

Conread position: 37-316
Cow position:
Alignm length: 283
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 27

Conread position: 38-316
Cow position:
Alignm length: 284
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 220

Conread position: 55-314
Cow position:
Alignm length: 269
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 69

Conread position: 67-316
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 176, 38

Conread position: 76-316
Cow position:
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 191, 180

Conread position: 82-316
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 99, 0

Conread position: 82-316
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 92

Conread position: 82-316
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 170, 65

Conread position: 82-316
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 48

Conread position: 88-316
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 99-316
Cow position:
Alignm length: 220
Alignm identity: 171
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 170, 26

Conread position: 104-316
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 68, 0

Conread position: 108-316
Cow position:
Alignm length: 212
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 149

Conread position: 117-315
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 69, 8

Conread position: 121-313
Cow position:
Alignm length: 195
Alignm identity: 150
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 149, 135

Conread position: 121-316
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 136, 17

Conread position: 121-316
Cow position:
Alignm length: 198
Alignm identity: 156
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 149, 135

Conread position: 122-288
Cow position:
Alignm length: 167
Alignm identity: 133
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 122-316
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 42, 62

Conread position: 139-316
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 127, 33

Conread position: 140-316
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 116, 0

Conread position: 140-316
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 142-314
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 109, 18

Conread position: 142-316
Cow position:
Alignm length: 178
Alignm identity: 133
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 74, 80

Conread position: 144-314
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 122, 113

Conread position: 149-316
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 117, 37

Conread position: 150-314
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 116, 106

Conread position: 150-316
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 105

Conread position: 154-316
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 41

Conread position: 160-316
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 110, 96

Conread position: 162-316
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 94

Show alignments to all cow chromosomes.