Cow genome map

Conread name: rpigcb_12369.y1

Conread position: 1-174
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 14

Conread position: 1-308
Cow position:
Alignm length: 310
Alignm identity: 216
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 251, 14

Conread position: 1-311
Cow position:
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 30

Conread position: 1-316
Cow position:
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 63

Conread position: 1-316
Cow position:
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 2-316
Cow position:
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 31

Conread position: 3-151
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 144

Conread position: 3-169
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 66

Conread position: 3-170
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 97

Conread position: 3-266
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 103

Conread position: 3-296
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 149

Conread position: 3-311
Cow position:
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 62

Conread position: 3-312
Cow position:
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 104

Conread position: 3-313
Cow position:
Alignm length: 316
Alignm identity: 212
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 64, 128

Conread position: 3-313
Cow position:
Alignm length: 313
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 248

Conread position: 3-316
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 222

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position:
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 216

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 29

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 221

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 168

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 64, 181

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 217
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 102, 49

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 219
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 267, 61

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position:
Alignm length: 321
Alignm identity: 223
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 64, 46

Conread position: 3-316
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 64, 82

Conread position: 3-316
Cow position:
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position:
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 119

Conread position: 3-316
Cow position:
Alignm length: 316
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 203

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 257, 67

Conread position: 9-161
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 95

Conread position: 10-316
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 246

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 57, 168

Conread position: 10-316
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 160

Conread position: 11-316
Cow position:
Alignm length: 309
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 12-152
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 20

Conread position: 12-170
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 12-228
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 58, 106

Conread position: 12-266
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 24, 19

Conread position: 12-286
Cow position:
Alignm length: 279
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 244

Conread position: 12-307
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 22

Conread position: 12-308
Cow position:
Alignm length: 309
Alignm identity: 217
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 139, 19

Conread position: 12-308
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 246

Conread position: 12-308
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 12-311
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 17, 30

Conread position: 12-312
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 247

Conread position: 12-313
Cow position:
Alignm length: 306
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 136

Conread position: 12-315
Cow position:
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 93

Conread position: 12-316
Cow position:
Alignm length: 318
Alignm identity: 220
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 53, 247

Conread position: 12-316
Cow position:
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 159

Conread position: 12-316
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 37

Conread position: 12-316
Cow position:
Alignm length: 326
Alignm identity: 222
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 12

Conread position: 12-316
Cow position:
Alignm length: 310
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 28, 22

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 55, 157

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 101

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position:
Alignm length: 311
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 53

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position:
Alignm length: 311
Alignm identity: 203
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 17

Conread position: 12-316
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-316
Cow position:
Alignm length: 309
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 103

Conread position: 12-316
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 241, 52

Conread position: 12-316
Cow position:
Alignm length: 308
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 12-316
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 55, 164

Conread position: 12-316
Cow position:
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 12

Conread position: 13-140
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 13-314
Cow position:
Alignm length: 304
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 42

Conread position: 13-316
Cow position:
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 105

Conread position: 13-316
Cow position:
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 89

Conread position: 13-316
Cow position:
Alignm length: 325
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 50, 0

Conread position: 13-316
Cow position:
Alignm length: 304
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 0

Conread position: 14-316
Cow position:
Alignm length: 308
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 24

Conread position: 18-316
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 240

Conread position: 19-316
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 205

Conread position: 19-316
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 36

Conread position: 19-316
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 81

Conread position: 20-316
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 47, 225

Conread position: 20-316
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 238

Conread position: 34-315
Cow position:
Alignm length: 293
Alignm identity: 202
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 95

Conread position: 35-316
Cow position:
Alignm length: 283
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 222, 29

Conread position: 35-316
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 223

Conread position: 38-316
Cow position:
Alignm length: 284
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 222

Conread position: 38-316
Cow position:
Alignm length: 282
Alignm identity: 191
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 28, 40

Conread position: 44-316
Cow position:
Alignm length: 275
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 5

Conread position: 44-316
Cow position:
Alignm length: 277
Alignm identity: 190
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 23, 83

Conread position: 45-316
Cow position:
Alignm length: 278
Alignm identity: 201
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 198

Conread position: 55-316
Cow position:
Alignm length: 264
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 203

Conread position: 66-316
Cow position:
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 192

Conread position: 67-314
Cow position:
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 58

Conread position: 75-314
Cow position:
Alignm length: 240
Alignm identity: 179
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 50, 0

Conread position: 76-316
Cow position:
Alignm length: 242
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 181, 0

Conread position: 76-316
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 175, 49

Conread position: 82-316
Cow position:
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 159, 102

Conread position: 82-316
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 187, 60

Conread position: 97-314
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 171, 43

Conread position: 105-289
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 19

Conread position: 106-304
Cow position:
Alignm length: 203
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 106

Conread position: 114-316
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 46

Conread position: 124-311
Cow position:
Alignm length: 191
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 92, 48

Conread position: 125-315
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 143, 132

Conread position: 138-308
Cow position:
Alignm length: 174
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 119

Conread position: 140-316
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 129, 117

Conread position: 142-316
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 125, 12

Conread position: 142-316
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 128, 114

Conread position: 144-316
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 112

Conread position: 150-308
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 17, 7

Conread position: 152-316
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 105

Conread position: 154-316
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 114, 102

Conread position: 169-316
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 88

Conread position: 170-308
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 86

Conread position: 170-316
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 27

Show alignments to all cow chromosomes.