Cow genome map
| Conread name: | rpigcb_12369.y1 |
| Conread position: | 1-312 |
| Cow position: | chr4:29035801-29035491 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 103 |
| Conread position: | 1-316 |
| Cow position: | chr4:14131395-14131074 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 31 |
| Conread position: | 1-316 |
| Cow position: | chr4:22073434-22073734 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 1-316 |
| Cow position: | chr4:22138349-22138665 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 178 |
| Conread position: | 2-316 |
| Cow position: | chr4:37620006-37620324 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 62 |
| Conread position: | 3-144 |
| Cow position: | chr4:12259900-12260040 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 122, 60 |
| Conread position: | 3-148 |
| Cow position: | chr4:46385693-46385840 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 3-149 |
| Cow position: | chr4:62567291-62567143 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 3-152 |
| Cow position: | chr4:46591545-46591396 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 3-161 |
| Cow position: | chr4:52632093-52632246 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 3-246 |
| Cow position: | chr4:18489507-18489752 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 159, 221 |
| Conread position: | 3-246 |
| Cow position: | chr4:39274092-39273848 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 3-260 |
| Cow position: | chr4:52771526-52771269 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 151 |
| Conread position: | 3-266 |
| Cow position: | chr4:46176578-46176847 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 66, 258 |
| Conread position: | 3-288 |
| Cow position: | chr4:53209118-53208836 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 3-307 |
| Cow position: | chr4:25595648-25595952 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 44, 62 |
| Conread position: | 3-312 |
| Cow position: | chr4:7258542-7258853 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 197 |
| Conread position: | 3-312 |
| Cow position: | chr4:13979880-13979571 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 3-312 |
| Cow position: | chr4:16642653-16642345 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 3-312 |
| Cow position: | chr4:17330346-17330660 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 58, 76 |
| Conread position: | 3-312 |
| Cow position: | chr4:44734460-44734148 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 66, 255 |
| Conread position: | 3-312 |
| Cow position: | chr4:60123896-60124205 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 265, 36 |
| Conread position: | 3-313 |
| Cow position: | chr4:2262870-2263182 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 46 |
| Conread position: | 3-313 |
| Cow position: | chr4:24671293-24671612 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 161 |
| Conread position: | 3-313 |
| Cow position: | chr4:67651591-67651907 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 64, 90 |
| Conread position: | 3-316 |
| Cow position: | chr4:352113-351797 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 256 |
| Conread position: | 3-316 |
| Cow position: | chr4:359726-359409 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 256 |
| Conread position: | 3-316 |
| Cow position: | chr4:3450866-3450557 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 64, 129 |
| Conread position: | 3-316 |
| Cow position: | chr4:4380409-4380108 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 64, 177 |
| Conread position: | 3-316 |
| Cow position: | chr4:4672450-4672764 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 156 |
| Conread position: | 3-316 |
| Cow position: | chr4:9165848-9166161 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 59, 139 |
| Conread position: | 3-316 |
| Cow position: | chr4:10993670-10993974 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 3-316 |
| Cow position: | chr4:11930807-11930494 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 269, 253 |
| Conread position: | 3-316 |
| Cow position: | chr4:13589968-13589664 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 3-316 |
| Cow position: | chr4:14814409-14814095 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 64, 166 |
| Conread position: | 3-316 |
| Cow position: | chr4:15871841-15872152 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 3-316 |
| Cow position: | chr4:17877801-17877486 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 255 |
| Conread position: | 3-316 |
| Cow position: | chr4:21588720-21589037 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 153, 67 |
| Conread position: | 3-316 |
| Cow position: | chr4:22236600-22236906 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 120, 29 |
| Conread position: | 3-316 |
| Cow position: | chr4:25197616-25197928 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 29 |
| Conread position: | 3-316 |
| Cow position: | chr4:25879276-25878967 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 263, 60 |
| Conread position: | 3-316 |
| Cow position: | chr4:26400841-26400526 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 124 |
| Conread position: | 3-316 |
| Cow position: | chr4:27178665-27178349 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 28 |
| Conread position: | 3-316 |
| Cow position: | chr4:27276665-27276974 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 31 |
| Conread position: | 3-316 |
| Cow position: | chr4:28836411-28836099 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 68, 132 |
| Conread position: | 3-316 |
| Cow position: | chr4:30778949-30779266 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 254 |
| Conread position: | 3-316 |
| Cow position: | chr4:36025441-36025744 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 267, 54 |
| Conread position: | 3-316 |
| Cow position: | chr4:36900216-36899902 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 255 |
| Conread position: | 3-316 |
| Cow position: | chr4:39422438-39422122 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 64, 215 |
| Conread position: | 3-316 |
| Cow position: | chr4:47753130-47752814 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 173 |
| Conread position: | 3-316 |
| Cow position: | chr4:48030700-48030384 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 255 |
| Conread position: | 3-316 |
| Cow position: | chr4:53830316-53830001 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 3-316 |
| Cow position: | chr4:54757433-54757745 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 3-316 |
| Cow position: | chr4:55508535-55508850 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 61 |
| Conread position: | 3-316 |
| Cow position: | chr4:61243102-61242795 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 64, 121 |
| Conread position: | 3-316 |
| Cow position: | chr4:61673140-61673456 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 49 |
| Conread position: | 3-316 |
| Cow position: | chr4:67445027-67444714 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 4-316 |
| Cow position: | chr4:30574331-30574025 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 45 |
| Conread position: | 4-316 |
| Cow position: | chr4:41097797-41097482 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 196, 62 |
| Conread position: | 4-316 |
| Cow position: | chr4:56852782-56852469 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 9-312 |
| Cow position: | chr4:41441442-41441138 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 9-316 |
| Cow position: | chr4:64072474-64072785 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 119 |
| Conread position: | 10-154 |
| Cow position: | chr4:3251658-3251804 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 10-283 |
| Cow position: | chr4:54501575-54501847 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 53 |
| Conread position: | 10-316 |
| Cow position: | chr4:17818923-17819230 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 57, 248 |
| Conread position: | 10-316 |
| Cow position: | chr4:63431307-63430998 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 11-316 |
| Cow position: | chr4:56410058-56409751 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 111 |
| Conread position: | 12-133 |
| Cow position: | chr4:21233002-21233118 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 12-142 |
| Cow position: | chr4:5629881-5630009 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 12-143 |
| Cow position: | chr4:58881091-58881223 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 54, 114 |
| Conread position: | 12-151 |
| Cow position: | chr4:33612487-33612628 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 12-151 |
| Cow position: | chr4:48235515-48235374 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 12-152 |
| Cow position: | chr4:19699978-19699833 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 12-155 |
| Cow position: | chr4:2141617-2141477 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 12-252 |
| Cow position: | chr4:1915706-1915941 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 12-255 |
| Cow position: | chr4:480133-480376 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 39 |
| Conread position: | 12-267 |
| Cow position: | chr4:21391941-21392176 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 12-308 |
| Cow position: | chr4:19584580-19584281 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 246 |
| Conread position: | 12-308 |
| Cow position: | chr4:23646971-23647257 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 12-313 |
| Cow position: | chr4:9815476-9815778 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 162 |
| Conread position: | 12-314 |
| Cow position: | chr4:10732094-10731790 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 115 |
| Conread position: | 12-314 |
| Cow position: | chr4:38999296-38999004 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 12 |
| Conread position: | 12-314 |
| Cow position: | chr4:46708656-46708956 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 52 |
| Conread position: | 12-314 |
| Cow position: | chr4:66112201-66112502 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 158 |
| Conread position: | 12-315 |
| Cow position: | chr4:42673047-42672741 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 247 |
| Conread position: | 12-316 |
| Cow position: | chr4:1404917-1404609 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 12-316 |
| Cow position: | chr4:5610199-5610500 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 12-316 |
| Cow position: | chr4:7430195-7429889 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 114 |
| Conread position: | 12-316 |
| Cow position: | chr4:12237415-12237722 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 246 |
| Conread position: | 12-316 |
| Cow position: | chr4:14470698-14470999 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 57 |
| Conread position: | 12-316 |
| Cow position: | chr4:19256190-19255893 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 51 |
| Conread position: | 12-316 |
| Cow position: | chr4:20327838-20328144 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 77 |
| Conread position: | 12-316 |
| Cow position: | chr4:21553307-21553612 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 116 |
| Conread position: | 12-316 |
| Cow position: | chr4:24119037-24119342 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 54 |
| Conread position: | 12-316 |
| Cow position: | chr4:26009322-26009015 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 246 |
| Conread position: | 12-316 |
| Cow position: | chr4:27292084-27292391 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 51, 69 |
| Conread position: | 12-316 |
| Cow position: | chr4:27466571-27466264 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 12-316 |
| Cow position: | chr4:27755429-27755742 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 98, 51 |
| Conread position: | 12-316 |
| Cow position: | chr4:29528985-29529291 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 12-316 |
| Cow position: | chr4:30690592-30690307 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 257, 22 |
| Conread position: | 12-316 |
| Cow position: | chr4:33069009-33069315 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 150 |
| Conread position: | 12-316 |
| Cow position: | chr4:34171698-34172000 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 19 |
| Conread position: | 12-316 |
| Cow position: | chr4:43315823-43316129 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 55, 45 |
| Conread position: | 12-316 |
| Cow position: | chr4:50194362-50194061 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 22 |
| Conread position: | 12-316 |
| Cow position: | chr4:52748586-52748886 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 159, 51 |
| Conread position: | 12-316 |
| Cow position: | chr4:54190960-54190677 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 240, 22 |
| Conread position: | 13-313 |
| Cow position: | chr4:14743130-14742840 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 13-315 |
| Cow position: | chr4:13327083-13327384 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 147 |
| Conread position: | 13-316 |
| Cow position: | chr4:30974211-30973915 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 111 |
| Conread position: | 13-316 |
| Cow position: | chr4:37553169-37553475 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 245 |
| Conread position: | 14-315 |
| Cow position: | chr4:13878061-13877763 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 14-316 |
| Cow position: | chr4:23655869-23655564 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 52, 105 |
| Conread position: | 14-316 |
| Cow position: | chr4:69018237-69017937 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 15-302 |
| Cow position: | chr4:53208164-53207891 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 251, 48 |
| Conread position: | 16-316 |
| Cow position: | chr4:2244118-2244427 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 115, 49 |
| Conread position: | 16-316 |
| Cow position: | chr4:61897668-61897963 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 53, 120 |
| Conread position: | 19-313 |
| Cow position: | chr4:43884910-43884615 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 48, 30 |
| Conread position: | 19-316 |
| Cow position: | chr4:16365148-16364848 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 239 |
| Conread position: | 20-316 |
| Cow position: | chr4:10885459-10885162 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 155 |
| Conread position: | 20-316 |
| Cow position: | chr4:64875922-64875623 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 238 |
| Conread position: | 21-316 |
| Cow position: | chr4:61972608-61972906 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 22-316 |
| Cow position: | chr4:44839023-44839314 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 43 |
| Conread position: | 28-316 |
| Cow position: | chr4:47268746-47269035 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 41, 126 |
| Conread position: | 35-308 |
| Cow position: | chr4:51903455-51903178 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 221 |
| Conread position: | 35-316 |
| Cow position: | chr4:44449734-44450017 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 95, 141 |
| Conread position: | 35-316 |
| Cow position: | chr4:54171216-54170939 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 35-316 |
| Cow position: | chr4:61450618-61450338 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 29 |
| Conread position: | 37-313 |
| Cow position: | chr4:38067734-38067462 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 30, 169 |
| Conread position: | 42-316 |
| Cow position: | chr4:27546605-27546329 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 25, 204 |
| Conread position: | 43-316 |
| Cow position: | chr4:20644424-20644152 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 21 |
| Conread position: | 43-316 |
| Cow position: | chr4:23526542-23526260 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 223 |
| Conread position: | 52-305 |
| Cow position: | chr4:17833070-17833325 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 75 |
| Conread position: | 52-308 |
| Cow position: | chr4:67706646-67706392 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 214, 120 |
| Conread position: | 53-314 |
| Cow position: | chr4:53545863-53545613 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 66-316 |
| Cow position: | chr4:14352861-14353113 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 67-316 |
| Cow position: | chr4:22101448-22101695 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 70-305 |
| Cow position: | chr4:22906854-22906618 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 87 |
| Conread position: | 75-316 |
| Cow position: | chr4:8413298-8413540 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 168 |
| Conread position: | 75-316 |
| Cow position: | chr4:8439632-8439874 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 75-316 |
| Cow position: | chr4:8761057-8760817 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 191, 40 |
| Conread position: | 77-316 |
| Cow position: | chr4:119924-120163 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 180, 98 |
| Conread position: | 79-316 |
| Cow position: | chr4:22366934-22366699 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 90 |
| Conread position: | 82-313 |
| Cow position: | chr4:68429890-68429662 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 170, 32 |
| Conread position: | 83-316 |
| Cow position: | chr4:10023280-10023049 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 172 |
| Conread position: | 84-316 |
| Cow position: | chr4:23757111-23756879 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 96 |
| Conread position: | 84-316 |
| Cow position: | chr4:39646515-39646264 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 88-316 |
| Cow position: | chr4:1499350-1499571 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 182, 102 |
| Conread position: | 113-316 |
| Cow position: | chr4:34383586-34383779 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 120-316 |
| Cow position: | chr4:28676446-28676643 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 121-316 |
| Cow position: | chr4:10333225-10333420 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 149, 116 |
| Conread position: | 121-316 |
| Cow position: | chr4:14229860-14230057 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 122-316 |
| Cow position: | chr4:59643345-59643148 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 16, 137 |
| Conread position: | 125-315 |
| Cow position: | chr4:14143033-14142842 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 7, 62 |
| Conread position: | 126-312 |
| Cow position: | chr4:38701411-38701212 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 124 |
| Conread position: | 140-316 |
| Cow position: | chr4:8704517-8704340 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 140-316 |
| Cow position: | chr4:16091874-16092047 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 140-316 |
| Cow position: | chr4:33497263-33497086 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 130, 116 |
| Conread position: | 141-316 |
| Cow position: | chr4:12260307-12260483 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 128, 116 |
| Conread position: | 150-313 |
| Cow position: | chr4:36755459-36755289 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 119, 106 |
| Conread position: | 151-316 |
| Cow position: | chr4:44073075-44073244 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 108 |
| Conread position: | 154-316 |
| Cow position: | chr4:52086835-52086676 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 131, 81 |
| Conread position: | 161-316 |
| Cow position: | chr4:1646449-1646300 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 104, 69 |
| Conread position: | 161-316 |
| Cow position: | chr4:12752503-12752348 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 163-316 |
| Cow position: | chr4:51002875-51002722 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 106, 93 |
| Conread position: | 170-308 |
| Cow position: | chr4:26746150-26746010 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 171-316 |
| Cow position: | chr4:43898225-43898369 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 189-316 |
| Cow position: | chr4:67435789-67435661 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 77, 67 |
Show alignments to all cow chromosomes.