Cow genome map

Conread name: rpigcb_12369.y1

Conread position: 1-316
Cow position: chr5:3242560-3242863 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 162, 33

Conread position: 1-316
Cow position: chr5:12640320-12640627 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 52, 106

Conread position: 1-316
Cow position: chr5:58856019-58855706 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 63

Conread position: 2-313
Cow position: chr5:14550667-14550982 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 2-315
Cow position: chr5:61030310-61030632 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 3-146
Cow position: chr5:61455672-61455527 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 3-150
Cow position: chr5:12709799-12709655 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 3-152
Cow position: chr5:14703049-14703201 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 3-161
Cow position: chr5:1247190-1247033 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 60

Conread position: 3-188
Cow position: chr5:57494496-57494684 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 3-198
Cow position: chr5:57327710-57327509 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 160

Conread position: 3-200
Cow position: chr5:52905580-52905769 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 3-246
Cow position: chr5:63967733-63967968 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 60, 0

Conread position: 3-298
Cow position: chr5:62678575-62678278 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 121

Conread position: 3-308
Cow position: chr5:28224366-28224070 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 60, 0

Conread position: 3-308
Cow position: chr5:34463671-34463974 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 62

Conread position: 3-312
Cow position: chr5:23354652-23354342 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 64, 49

Conread position: 3-313
Cow position: chr5:14635640-14635949 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 62

Conread position: 3-313
Cow position: chr5:31731105-31730794 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 105, 36

Conread position: 3-313
Cow position: chr5:37941876-37942185 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 51

Conread position: 3-313
Cow position: chr5:51151445-51151757 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 125

Conread position: 3-314
Cow position: chr5:50573671-50573361 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 3-316
Cow position: chr5:279237-279553 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position: chr5:2427809-2428125 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position: chr5:3696881-3696570 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 65, 218

Conread position: 3-316
Cow position: chr5:3790166-3789850 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 66, 256

Conread position: 3-316
Cow position: chr5:6528596-6528283 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 49

Conread position: 3-316
Cow position: chr5:7498042-7498358 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position: chr5:8179096-8178784 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 217
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 64, 136

Conread position: 3-316
Cow position: chr5:10923097-10922786 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 35

Conread position: 3-316
Cow position: chr5:14415692-14415374 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 26, 78

Conread position: 3-316
Cow position: chr5:14420427-14420743 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 256

Conread position: 3-316
Cow position: chr5:14904163-14904454 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 12

Conread position: 3-316
Cow position: chr5:19299862-19300174 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 250

Conread position: 3-316
Cow position: chr5:20410720-20411036 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position: chr5:21190160-21189844 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position: chr5:29680994-29680690 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 26, 64

Conread position: 3-316
Cow position: chr5:29741618-29741931 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 64, 171

Conread position: 3-316
Cow position: chr5:30176263-30176578 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 63

Conread position: 3-316
Cow position: chr5:34709710-34709394 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position: chr5:35989233-35988918 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 129

Conread position: 3-316
Cow position: chr5:39299445-39299130 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 125

Conread position: 3-316
Cow position: chr5:41531170-41531488 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 63, 255

Conread position: 3-316
Cow position: chr5:43923235-43923547 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 16

Conread position: 3-316
Cow position: chr5:43985019-43984709 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 264, 55

Conread position: 3-316
Cow position: chr5:47343817-47343501 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position: chr5:47871130-47871443 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 154

Conread position: 3-316
Cow position: chr5:47888797-47889113 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 256

Conread position: 3-316
Cow position: chr5:49522646-49522330 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position: chr5:49821058-49820743 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 80

Conread position: 3-316
Cow position: chr5:50645535-50645850 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 254

Conread position: 3-316
Cow position: chr5:54869332-54869019 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 49

Conread position: 3-316
Cow position: chr5:55632007-55631691 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 256

Conread position: 3-316
Cow position: chr5:58769932-58770247 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 207

Conread position: 3-316
Cow position: chr5:64778063-64778379 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position: chr5:70593061-70593378 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 257

Conread position: 4-316
Cow position: chr5:16185000-16184694 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 45

Conread position: 4-316
Cow position: chr5:29827962-29827655 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 43

Conread position: 7-158
Cow position: chr5:32087807-32087960 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 7-316
Cow position: chr5:58005157-58004847 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 120

Conread position: 9-316
Cow position: chr5:41951177-41951479 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 56

Conread position: 10-213
Cow position: chr5:36409633-36409842 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 10-216
Cow position: chr5:54745945-54746153 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 10-246
Cow position: chr5:39361195-39361433 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 10-246
Cow position: chr5:44994131-44994372 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 169, 53

Conread position: 10-266
Cow position: chr5:67212289-67212035 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 154

Conread position: 10-316
Cow position: chr5:1690822-1690513 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position: chr5:6694070-6694379 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position: chr5:8024288-8024588 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 155, 35

Conread position: 10-316
Cow position: chr5:10300283-10299974 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 59, 0

Conread position: 10-316
Cow position: chr5:19891001-19890692 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position: chr5:37801637-37801328 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position: chr5:52226335-52226644 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position: chr5:68272913-68273222 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 57, 0

Conread position: 11-316
Cow position: chr5:14542543-14542849 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 58, 140

Conread position: 11-316
Cow position: chr5:63647569-63647865 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 14

Conread position: 12-152
Cow position: chr5:15426434-15426295 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 54, 106

Conread position: 12-153
Cow position: chr5:24996318-24996458 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 93

Conread position: 12-154
Cow position: chr5:2851222-2851079 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 114

Conread position: 12-158
Cow position: chr5:6033145-6032999 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 20

Conread position: 12-161
Cow position: chr5:52000127-51999977 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 114

Conread position: 12-167
Cow position: chr5:63388703-63388547 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 153

Conread position: 12-174
Cow position: chr5:25935857-25935699 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 89

Conread position: 12-177
Cow position: chr5:19905368-19905535 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 154

Conread position: 12-188
Cow position: chr5:29366915-29366738 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 54, 78

Conread position: 12-247
Cow position: chr5:66119344-66119584 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 12-266
Cow position: chr5:27690152-27690405 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 39

Conread position: 12-289
Cow position: chr5:12146602-12146322 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 213

Conread position: 12-304
Cow position: chr5:58246263-58245970 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 92

Conread position: 12-307
Cow position: chr5:33180813-33180526 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 254, 205

Conread position: 12-308
Cow position: chr5:26790551-26790834 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 244, 48

Conread position: 12-308
Cow position: chr5:50729402-50729109 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-312
Cow position: chr5:51937064-51936767 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 148

Conread position: 12-314
Cow position: chr5:27403334-27403636 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 163

Conread position: 12-316
Cow position: chr5:2332606-2332923 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 55, 13

Conread position: 12-316
Cow position: chr5:3280966-3281265 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 55, 20

Conread position: 12-316
Cow position: chr5:5938229-5937926 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 33

Conread position: 12-316
Cow position: chr5:7397450-7397148 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 37

Conread position: 12-316
Cow position: chr5:9874174-9873862 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 55, 0

Conread position: 12-316
Cow position: chr5:14314430-14314125 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 114

Conread position: 12-316
Cow position: chr5:17028002-17027695 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 17, 30

Conread position: 12-316
Cow position: chr5:18557494-18557791 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 258, 22

Conread position: 12-316
Cow position: chr5:19813310-19813618 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 119, 52

Conread position: 12-316
Cow position: chr5:24349012-24348723 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 43

Conread position: 12-316
Cow position: chr5:26094264-26094568 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 12-316
Cow position: chr5:26505497-26505801 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 170

Conread position: 12-316
Cow position: chr5:26647626-26647321 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 246

Conread position: 12-316
Cow position: chr5:29505016-29504701 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 53, 17

Conread position: 12-316
Cow position: chr5:33414507-33414803 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 25

Conread position: 12-316
Cow position: chr5:35208171-35207863 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 148

Conread position: 12-316
Cow position: chr5:43437008-43437314 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 220

Conread position: 12-316
Cow position: chr5:44752406-44752717 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 53

Conread position: 12-316
Cow position: chr5:46709089-46708783 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 91

Conread position: 12-316
Cow position: chr5:47559631-47559934 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 52

Conread position: 12-316
Cow position: chr5:47750856-47750552 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 55, 162

Conread position: 12-316
Cow position: chr5:48224670-48224973 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 146, 49

Conread position: 12-316
Cow position: chr5:50821687-50821390 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 51

Conread position: 12-316
Cow position: chr5:52165274-52165577 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 54, 114

Conread position: 12-316
Cow position: chr5:52289682-52289383 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 194

Conread position: 12-316
Cow position: chr5:55942491-55942795 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 54, 27

Conread position: 12-316
Cow position: chr5:56524080-56523776 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 76

Conread position: 12-316
Cow position: chr5:58519500-58519798 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 52

Conread position: 12-316
Cow position: chr5:59876828-59877136 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 117

Conread position: 12-316
Cow position: chr5:64823406-64823702 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 54, 22

Conread position: 12-316
Cow position: chr5:64844217-64844515 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 47

Conread position: 13-316
Cow position: chr5:26377763-26378065 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 51

Conread position: 13-316
Cow position: chr5:31481050-31480755 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 15

Conread position: 13-316
Cow position: chr5:41410511-41410818 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 13-316
Cow position: chr5:53184567-53184877 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 54, 119

Conread position: 14-188
Cow position: chr5:37090868-37091044 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 14-308
Cow position: chr5:44707667-44707962 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 38

Conread position: 14-316
Cow position: chr5:7176228-7175925 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 242

Conread position: 14-316
Cow position: chr5:57365172-57365471 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 255, 50

Conread position: 18-316
Cow position: chr5:76097566-76097862 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 206
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 252, 46

Conread position: 19-316
Cow position: chr5:3545222-3544922 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 239

Conread position: 19-316
Cow position: chr5:4389253-4388955 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 35

Conread position: 21-316
Cow position: chr5:37626771-37626473 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 26-308
Cow position: chr5:41981293-41981012 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 19

Conread position: 28-316
Cow position: chr5:4071762-4071474 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 191, 29

Conread position: 34-315
Cow position: chr5:25927806-25928087 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 45

Conread position: 35-308
Cow position: chr5:22737990-22737715 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 55

Conread position: 36-304
Cow position: chr5:59873647-59873910 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 51

Conread position: 37-313
Cow position: chr5:48718707-48718429 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 30, 90

Conread position: 37-316
Cow position: chr5:53005351-53005633 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 32, 221

Conread position: 41-308
Cow position: chr5:70960268-70960538 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 41-316
Cow position: chr5:10852934-10853212 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 26, 217

Conread position: 43-316
Cow position: chr5:64615891-64615614 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 189
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 94, 12

Conread position: 44-316
Cow position: chr5:50637706-50637437 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 83

Conread position: 53-316
Cow position: chr5:24919009-24919275 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 55-316
Cow position: chr5:35145218-35144945 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 12, 0

Conread position: 66-313
Cow position: chr5:75756477-75756223 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 66, 154

Conread position: 66-316
Cow position: chr5:34115515-34115244 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 97, 204

Conread position: 71-308
Cow position: chr5:31635298-31635059 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 80, 0

Conread position: 73-316
Cow position: chr5:35763136-35762892 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 0

Conread position: 79-316
Cow position: chr5:42673929-42673696 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 12, 34

Conread position: 82-313
Cow position: chr5:70290322-70290090 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 174

Conread position: 85-316
Cow position: chr5:19780176-19780405 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 181, 87

Conread position: 88-308
Cow position: chr5:31020286-31020504 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 184, 28

Conread position: 88-316
Cow position: chr5:3582414-3582179 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 16

Conread position: 93-316
Cow position: chr5:17645067-17645285 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 93-316
Cow position: chr5:65312795-65312575 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 114-316
Cow position: chr5:28456712-28456911 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 155, 23

Conread position: 114-316
Cow position: chr5:28460014-28460213 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 155, 23

Conread position: 120-316
Cow position: chr5:34480171-34480368 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 137, 0

Conread position: 127-308
Cow position: chr5:56821045-56820873 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 45

Conread position: 140-268
Cow position: chr5:48925914-48926041 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 140-316
Cow position: chr5:32754633-32754810 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 82

Conread position: 143-316
Cow position: chr5:41362979-41363158 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 150-316
Cow position: chr5:6032764-6032597 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 154-316
Cow position: chr5:26156203-26156366 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 157-316
Cow position: chr5:7041956-7042116 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 0

Conread position: 157-316
Cow position: chr5:18902329-18902169 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 99

Conread position: 160-316
Cow position: chr5:42727033-42727189 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 104, 84

Conread position: 161-316
Cow position: chr5:63388506-63388350 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 163-316
Cow position: chr5:68871915-68871761 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 94

Conread position: 166-316
Cow position: chr5:63456796-63456947 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 106, 90

Conread position: 184-316
Cow position: chr5:57889455-57889322 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 73

Conread position: 185-316
Cow position: chr5:40889827-40889959 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 81, 72

Show alignments to all cow chromosomes.