Cow genome map

Conread name: rpigcb_12369.y1

Conread position: 1-153
Cow position: chr6:21184887-21184736 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 1-316
Cow position: chr6:10599048-10598745 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 65, 31

Conread position: 1-316
Cow position: chr6:32915994-32916303 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 30

Conread position: 1-316
Cow position: chr6:37331891-37331578 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 196, 62

Conread position: 2-316
Cow position: chr6:11169634-11169324 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 64

Conread position: 3-228
Cow position: chr6:63272682-63272912 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 62, 123

Conread position: 3-246
Cow position: chr6:12337912-12337672 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 3-280
Cow position: chr6:12845238-12844962 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 177, 60

Conread position: 3-300
Cow position: chr6:55904165-55903865 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 66, 255

Conread position: 3-307
Cow position: chr6:33147987-33147688 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 61

Conread position: 3-312
Cow position: chr6:180435-180743 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 64, 29

Conread position: 3-312
Cow position: chr6:5944369-5944681 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 64, 252

Conread position: 3-312
Cow position: chr6:25218860-25218549 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 3-313
Cow position: chr6:9375442-9375751 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 197

Conread position: 3-313
Cow position: chr6:13741623-13741317 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 61

Conread position: 3-314
Cow position: chr6:33302336-33302029 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 46

Conread position: 3-315
Cow position: chr6:8753377-8753691 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-315
Cow position: chr6:34075949-34075643 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 30

Conread position: 3-316
Cow position: chr6:47479-47789 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 64, 129

Conread position: 3-316
Cow position: chr6:1816934-1817249 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 129

Conread position: 3-316
Cow position: chr6:2110185-2110498 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 64, 189

Conread position: 3-316
Cow position: chr6:3575372-3575054 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 254

Conread position: 3-316
Cow position: chr6:5500860-5501180 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 30, 156

Conread position: 3-316
Cow position: chr6:6343354-6343038 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 60

Conread position: 3-316
Cow position: chr6:6769203-6768893 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 221
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 266, 31

Conread position: 3-316
Cow position: chr6:8206268-8205953 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 83

Conread position: 3-316
Cow position: chr6:9737188-9737498 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 220, 36

Conread position: 3-316
Cow position: chr6:11637824-11638124 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 250, 46

Conread position: 3-316
Cow position: chr6:11720846-11721162 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 255

Conread position: 3-316
Cow position: chr6:14690883-14690571 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 64, 167

Conread position: 3-316
Cow position: chr6:15275159-15275475 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position: chr6:17865468-17865156 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 64, 46

Conread position: 3-316
Cow position: chr6:25359003-25358693 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 92

Conread position: 3-316
Cow position: chr6:25789655-25789971 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 256

Conread position: 3-316
Cow position: chr6:28111760-28112072 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 110

Conread position: 3-316
Cow position: chr6:34842628-34842943 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 3-316
Cow position: chr6:38872448-38872762 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 219

Conread position: 3-316
Cow position: chr6:40549619-40549935 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position: chr6:41232541-41232228 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 82

Conread position: 3-316
Cow position: chr6:44578468-44578778 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 79

Conread position: 3-316
Cow position: chr6:45665858-45666174 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 64, 109

Conread position: 3-316
Cow position: chr6:46634184-46633879 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 64, 129

Conread position: 3-316
Cow position: chr6:47540458-47540141 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 12

Conread position: 3-316
Cow position: chr6:54647594-54647909 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 67

Conread position: 3-316
Cow position: chr6:55040284-55040601 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position: chr6:55538195-55538507 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 225
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 64, 112

Conread position: 3-316
Cow position: chr6:67214672-67214358 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 74

Conread position: 3-316
Cow position: chr6:67544369-67544676 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 36

Conread position: 4-316
Cow position: chr6:14063734-14064042 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 26

Conread position: 7-316
Cow position: chr6:5095630-5095934 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 48

Conread position: 9-316
Cow position: chr6:55688961-55688667 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 22

Conread position: 10-180
Cow position: chr6:20329946-20329774 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 10-191
Cow position: chr6:30015942-30016125 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 10-283
Cow position: chr6:15881749-15882025 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 0

Conread position: 10-312
Cow position: chr6:27093513-27093817 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 169

Conread position: 10-313
Cow position: chr6:37389384-37389078 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 246

Conread position: 10-314
Cow position: chr6:18447587-18447895 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 31

Conread position: 10-316
Cow position: chr6:3095031-3095340 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 0

Conread position: 10-316
Cow position: chr6:6568167-6568468 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 57, 181

Conread position: 10-316
Cow position: chr6:13489471-13489160 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 10-316
Cow position: chr6:19515925-19515616 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 56, 246

Conread position: 10-316
Cow position: chr6:19569862-19570165 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 55, 148

Conread position: 10-316
Cow position: chr6:21718855-21719162 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 57, 248

Conread position: 10-316
Cow position: chr6:45617515-45617829 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 57, 239

Conread position: 10-316
Cow position: chr6:45694936-45694627 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 56, 0

Conread position: 10-316
Cow position: chr6:45900918-45901227 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 57, 180

Conread position: 10-316
Cow position: chr6:60017987-60017689 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 22

Conread position: 11-313
Cow position: chr6:6943757-6944060 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 54, 117

Conread position: 11-315
Cow position: chr6:64431858-64431564 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 12-136
Cow position: chr6:51463693-51463819 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 12-154
Cow position: chr6:53651962-53651818 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 27

Conread position: 12-180
Cow position: chr6:15242755-15242589 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 54, 75

Conread position: 12-180
Cow position: chr6:31535648-31535819 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 110

Conread position: 12-208
Cow position: chr6:42961444-42961642 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 54, 178

Conread position: 12-234
Cow position: chr6:53401283-53401070 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 12-243
Cow position: chr6:68127377-68127144 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 12-302
Cow position: chr6:37487379-37487672 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 17, 117

Conread position: 12-304
Cow position: chr6:65862610-65862314 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 248

Conread position: 12-308
Cow position: chr6:5958100-5958391 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 90

Conread position: 12-308
Cow position: chr6:10266063-10266361 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 119, 245

Conread position: 12-308
Cow position: chr6:10605608-10605308 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-311
Cow position: chr6:56843075-56842781 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 258, 20

Conread position: 12-312
Cow position: chr6:67429966-67430269 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 54, 244

Conread position: 12-313
Cow position: chr6:14958426-14958723 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 132

Conread position: 12-314
Cow position: chr6:27525933-27526237 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 211

Conread position: 12-314
Cow position: chr6:34549330-34549023 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 144, 52

Conread position: 12-314
Cow position: chr6:53932928-53933230 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 20

Conread position: 12-315
Cow position: chr6:25407473-25407787 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 114, 52

Conread position: 12-316
Cow position: chr6:607185-606879 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 248

Conread position: 12-316
Cow position: chr6:2088581-2088275 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 28, 20

Conread position: 12-316
Cow position: chr6:3978746-3979045 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 26

Conread position: 12-316
Cow position: chr6:4948865-4948558 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position: chr6:6181653-6181961 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position: chr6:10695790-10695476 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 20

Conread position: 12-316
Cow position: chr6:16737939-16737637 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 33

Conread position: 12-316
Cow position: chr6:18988132-18987836 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 20

Conread position: 12-316
Cow position: chr6:24327220-24327525 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 51

Conread position: 12-316
Cow position: chr6:30826113-30826442 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 39, 65

Conread position: 12-316
Cow position: chr6:36918256-36918556 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 112, 60

Conread position: 12-316
Cow position: chr6:38771205-38770921 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 146, 20

Conread position: 12-316
Cow position: chr6:40032112-40031809 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 69

Conread position: 12-316
Cow position: chr6:43789302-43789604 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 51, 148

Conread position: 12-316
Cow position: chr6:46667025-46666723 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 77

Conread position: 12-316
Cow position: chr6:53178557-53178255 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-316
Cow position: chr6:58748133-58747827 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 191

Conread position: 12-316
Cow position: chr6:59597581-59597273 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 12-316
Cow position: chr6:60456750-60456447 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 13

Conread position: 12-316
Cow position: chr6:65711747-65711443 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 13-178
Cow position: chr6:38853736-38853903 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 53, 0

Conread position: 13-316
Cow position: chr6:33851873-33852172 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 240, 51

Conread position: 13-316
Cow position: chr6:49410773-49411063 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 140, 19

Conread position: 14-239
Cow position: chr6:60467941-60467722 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 14-316
Cow position: chr6:53345713-53345412 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 50

Conread position: 18-312
Cow position: chr6:20552185-20552483 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 241

Conread position: 18-316
Cow position: chr6:32125984-32125683 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 241

Conread position: 18-316
Cow position: chr6:64721206-64720913 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 51, 79

Conread position: 19-312
Cow position: chr6:68252694-68252404 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 33

Conread position: 19-316
Cow position: chr6:3885440-3885741 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 19-316
Cow position: chr6:24243346-24243051 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 226

Conread position: 19-316
Cow position: chr6:27173907-27173607 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 50, 172

Conread position: 19-316
Cow position: chr6:44016756-44017057 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 239

Conread position: 24-312
Cow position: chr6:68272217-68272501 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 175

Conread position: 26-316
Cow position: chr6:16411101-16410814 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 40

Conread position: 28-312
Cow position: chr6:46585193-46584904 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 39, 232

Conread position: 29-316
Cow position: chr6:4389755-4389477 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 237, 82

Conread position: 30-316
Cow position: chr6:59508253-59507957 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 26, 40

Conread position: 31-316
Cow position: chr6:1783868-1784149 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 72

Conread position: 32-316
Cow position: chr6:6060654-6060941 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 227

Conread position: 33-316
Cow position: chr6:17050414-17050136 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 89, 32

Conread position: 35-314
Cow position: chr6:56502205-56501930 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 28

Conread position: 38-316
Cow position: chr6:10682644-10682358 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 29, 83

Conread position: 38-316
Cow position: chr6:41193394-41193113 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 201, 53

Conread position: 41-279
Cow position: chr6:24649744-24649508 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 26, 89

Conread position: 44-316
Cow position: chr6:48872316-48872590 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 23, 150

Conread position: 49-316
Cow position: chr6:65016004-65016273 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 52-316
Cow position: chr6:181510-181776 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 15, 154

Conread position: 52-316
Cow position: chr6:11032310-11032577 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 0

Conread position: 53-316
Cow position: chr6:51734112-51733847 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 14, 121

Conread position: 54-316
Cow position: chr6:8599670-8599404 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 206

Conread position: 67-316
Cow position: chr6:33460954-33460708 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 202, 153

Conread position: 75-316
Cow position: chr6:17557232-17556991 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 173, 55

Conread position: 75-316
Cow position: chr6:20245942-20245700 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 182

Conread position: 75-316
Cow position: chr6:56651662-56651902 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 83, 41

Conread position: 81-316
Cow position: chr6:6642739-6642969 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 41, 0

Conread position: 81-316
Cow position: chr6:19171137-19170901 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 176

Conread position: 82-316
Cow position: chr6:38233834-38233608 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 116, 66

Conread position: 83-315
Cow position: chr6:27887907-27887688 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 144, 0

Conread position: 104-312
Cow position: chr6:63094636-63094427 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 159, 153

Conread position: 107-315
Cow position: chr6:59296604-59296402 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 165, 65

Conread position: 120-316
Cow position: chr6:4902842-4903031 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 146, 28

Conread position: 121-316
Cow position: chr6:49706786-49706982 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 136, 0

Conread position: 130-316
Cow position: chr6:31927850-31927666 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 138, 77

Conread position: 131-314
Cow position: chr6:46246304-46246477 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 134, 7

Conread position: 139-316
Cow position: chr6:34115810-34115632 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 127, 118

Conread position: 140-316
Cow position: chr6:89312-89489 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 117, 0

Conread position: 140-316
Cow position: chr6:1834934-1834760 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 116, 0

Conread position: 140-316
Cow position: chr6:3484463-3484640 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 130, 116

Conread position: 140-316
Cow position: chr6:27477796-27477618 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 130, 116

Conread position: 141-316
Cow position: chr6:479488-479312 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 129, 115

Conread position: 142-316
Cow position: chr6:50572109-50571934 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 75, 81

Conread position: 142-316
Cow position: chr6:52697557-52697382 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 128, 114

Conread position: 143-316
Cow position: chr6:457692-457866 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 42, 33

Conread position: 144-315
Cow position: chr6:19695331-19695159 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 126, 113

Conread position: 150-316
Cow position: chr6:12100370-12100204 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 63

Conread position: 150-316
Cow position: chr6:47640716-47640886 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 9

Conread position: 150-316
Cow position: chr6:49685342-49685175 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 120, 107

Conread position: 150-316
Cow position: chr6:53140612-53140778 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 134
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 116, 14

Conread position: 150-316
Cow position: chr6:66433699-66433535 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 0

Conread position: 153-316
Cow position: chr6:50983963-50983799 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 117, 104

Conread position: 154-313
Cow position: chr6:17345126-17344964 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 57, 107

Conread position: 157-316
Cow position: chr6:16103472-16103633 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 106, 92

Conread position: 157-316
Cow position: chr6:19045114-19044955 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 161-313
Cow position: chr6:46866021-46866173 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 81

Conread position: 162-316
Cow position: chr6:59620412-59620256 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 163-316
Cow position: chr6:62921472-62921626 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 170-314
Cow position: chr6:50114609-50114464 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 0

Show alignments to all cow chromosomes.