Cow genome map

Conread name: rpigcb_12369.y1

Conread position: 1-152
Cow position: chr9:5399858-5400003 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 1-265
Cow position: chr9:2398489-2398232 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 1-285
Cow position: chr9:2022831-2023116 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 63, 56

Conread position: 1-316
Cow position: chr9:26577717-26577410 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 31

Conread position: 2-144
Cow position: chr9:55287758-55287611 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 2-316
Cow position: chr9:8534545-8534233 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 50

Conread position: 3-145
Cow position: chr9:5532090-5532233 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 123

Conread position: 3-155
Cow position: chr9:64516958-64516806 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 98

Conread position: 3-250
Cow position: chr9:50080905-50080660 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 60, 0

Conread position: 3-251
Cow position: chr9:26403926-26404178 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 221

Conread position: 3-266
Cow position: chr9:7363166-7363436 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 41, 29

Conread position: 3-266
Cow position: chr9:26057299-26057051 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 60, 0

Conread position: 3-304
Cow position: chr9:36445764-36446065 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 60

Conread position: 3-311
Cow position: chr9:41319530-41319221 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 215
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 64, 129

Conread position: 3-312
Cow position: chr9:7006751-7006438 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 64, 0

Conread position: 3-312
Cow position: chr9:9017082-9016770 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 255

Conread position: 3-312
Cow position: chr9:10940611-10940299 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-312
Cow position: chr9:59453893-59454200 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 3-315
Cow position: chr9:10355418-10355101 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 159, 60

Conread position: 3-315
Cow position: chr9:15805783-15805473 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 16

Conread position: 3-315
Cow position: chr9:18163014-18162700 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 3-315
Cow position: chr9:22802657-22802966 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 264, 145

Conread position: 3-316
Cow position: chr9:1950058-1950371 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 24

Conread position: 3-316
Cow position: chr9:1984377-1984053 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 148, 31

Conread position: 3-316
Cow position: chr9:6879907-6880228 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 156

Conread position: 3-316
Cow position: chr9:7058042-7058360 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 256

Conread position: 3-316
Cow position: chr9:9443456-9443134 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 60

Conread position: 3-316
Cow position: chr9:10858030-10857725 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 206

Conread position: 3-316
Cow position: chr9:12259251-12259561 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 49

Conread position: 3-316
Cow position: chr9:12284696-12285012 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 3-316
Cow position: chr9:17411039-17410736 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 52

Conread position: 3-316
Cow position: chr9:17579452-17579768 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position: chr9:22656809-22656493 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 255

Conread position: 3-316
Cow position: chr9:24917281-24917595 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 64, 136

Conread position: 3-316
Cow position: chr9:26065276-26064966 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 49

Conread position: 3-316
Cow position: chr9:27039123-27038808 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 112

Conread position: 3-316
Cow position: chr9:29808603-29808920 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 122, 148

Conread position: 3-316
Cow position: chr9:31124786-31124470 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 46

Conread position: 3-316
Cow position: chr9:32540045-32540359 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 40, 247

Conread position: 3-316
Cow position: chr9:34697156-34696843 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 41

Conread position: 3-316
Cow position: chr9:37017025-37017337 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 61

Conread position: 3-316
Cow position: chr9:39681490-39681811 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 94

Conread position: 3-316
Cow position: chr9:43301603-43301912 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 64, 49

Conread position: 3-316
Cow position: chr9:51177643-51177958 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 66, 175

Conread position: 3-316
Cow position: chr9:52407310-52407614 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 29

Conread position: 3-316
Cow position: chr9:53631390-53631075 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 112

Conread position: 3-316
Cow position: chr9:64050418-64050108 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 64

Conread position: 7-147
Cow position: chr9:26086208-26086350 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 9-316
Cow position: chr9:1061692-1062001 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 63, 0

Conread position: 9-316
Cow position: chr9:9723737-9723431 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 75

Conread position: 10-155
Cow position: chr9:40542267-40542404 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 10-313
Cow position: chr9:4976695-4977001 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 248

Conread position: 10-313
Cow position: chr9:54473269-54473584 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 215
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 57, 257

Conread position: 10-316
Cow position: chr9:6887586-6887273 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 15, 245

Conread position: 10-316
Cow position: chr9:17617579-17617270 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position: chr9:22626275-22625966 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 248

Conread position: 10-316
Cow position: chr9:24726528-24726226 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 21

Conread position: 10-316
Cow position: chr9:25645076-25645385 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position: chr9:27993854-27994163 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 57, 0

Conread position: 10-316
Cow position: chr9:47799300-47799609 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 56, 246

Conread position: 10-316
Cow position: chr9:53744332-53744022 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 0

Conread position: 12-179
Cow position: chr9:55256401-55256235 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 77

Conread position: 12-205
Cow position: chr9:6933924-6933731 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 12-228
Cow position: chr9:5763484-5763266 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 12-238
Cow position: chr9:22114485-22114267 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 55, 26

Conread position: 12-283
Cow position: chr9:13994336-13994608 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 37

Conread position: 12-293
Cow position: chr9:1952119-1951840 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 51

Conread position: 12-294
Cow position: chr9:23430996-23430718 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 19

Conread position: 12-299
Cow position: chr9:61997449-61997169 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 114

Conread position: 12-308
Cow position: chr9:8868991-8868691 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 190

Conread position: 12-308
Cow position: chr9:47500057-47499753 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 189

Conread position: 12-312
Cow position: chr9:18215757-18215474 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 11

Conread position: 12-313
Cow position: chr9:6952240-6952534 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 97, 52

Conread position: 12-313
Cow position: chr9:8236247-8235942 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 244

Conread position: 12-313
Cow position: chr9:21279322-21279626 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 54, 244

Conread position: 12-314
Cow position: chr9:214318-214006 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 116

Conread position: 12-316
Cow position: chr9:5268702-5269009 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-316
Cow position: chr9:5628818-5628513 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 105

Conread position: 12-316
Cow position: chr9:5886398-5886702 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 128

Conread position: 12-316
Cow position: chr9:8997702-8998009 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 247

Conread position: 12-316
Cow position: chr9:8998506-8998806 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 12-316
Cow position: chr9:9200575-9200268 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 70, 52

Conread position: 12-316
Cow position: chr9:9516619-9516318 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 14

Conread position: 12-316
Cow position: chr9:12428360-12428054 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 27, 19

Conread position: 12-316
Cow position: chr9:13494037-13493734 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 51, 163

Conread position: 12-316
Cow position: chr9:20942459-20942160 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 19

Conread position: 12-316
Cow position: chr9:21963463-21963156 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 246

Conread position: 12-316
Cow position: chr9:23388528-23388226 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 52

Conread position: 12-316
Cow position: chr9:27780910-27781217 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 246

Conread position: 12-316
Cow position: chr9:30402270-30401964 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 42

Conread position: 12-316
Cow position: chr9:32812494-32812787 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 33

Conread position: 12-316
Cow position: chr9:37510166-37510465 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 12-316
Cow position: chr9:37967260-37967564 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 55, 132

Conread position: 12-316
Cow position: chr9:38634771-38634472 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 68

Conread position: 12-316
Cow position: chr9:40327403-40327097 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 55, 113

Conread position: 12-316
Cow position: chr9:41789433-41789749 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 126, 35

Conread position: 12-316
Cow position: chr9:42585474-42585177 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 12-316
Cow position: chr9:45756507-45756804 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 27

Conread position: 12-316
Cow position: chr9:47882285-47882591 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 99

Conread position: 12-316
Cow position: chr9:48017673-48017371 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 52

Conread position: 12-316
Cow position: chr9:51566332-51566049 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 256, 37

Conread position: 12-316
Cow position: chr9:53608245-53607941 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 92

Conread position: 12-316
Cow position: chr9:59172229-59171927 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 33

Conread position: 13-150
Cow position: chr9:10144325-10144186 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 13-205
Cow position: chr9:9199633-9199444 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 50, 0

Conread position: 13-306
Cow position: chr9:5455441-5455735 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 156

Conread position: 13-316
Cow position: chr9:8937295-8937602 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 246

Conread position: 14-155
Cow position: chr9:51557214-51557065 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 14-316
Cow position: chr9:1520582-1520276 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 104

Conread position: 14-316
Cow position: chr9:6192311-6192011 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 144

Conread position: 14-316
Cow position: chr9:20406786-20407088 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 113

Conread position: 14-316
Cow position: chr9:42571216-42570910 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 245

Conread position: 14-316
Cow position: chr9:52753228-52753526 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 256, 5

Conread position: 18-316
Cow position: chr9:3054079-3053780 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 144

Conread position: 18-316
Cow position: chr9:26477715-26478004 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 27

Conread position: 18-316
Cow position: chr9:28016834-28017133 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 49, 68

Conread position: 19-305
Cow position: chr9:32238536-32238827 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 50, 33

Conread position: 19-316
Cow position: chr9:22828222-22828525 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 212
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 19-316
Cow position: chr9:28025816-28025515 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 240

Conread position: 21-316
Cow position: chr9:18252768-18252477 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 114

Conread position: 25-316
Cow position: chr9:44831898-44831603 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 103

Conread position: 26-316
Cow position: chr9:19155298-19155591 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 69

Conread position: 28-313
Cow position: chr9:42000093-41999810 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 238, 39

Conread position: 31-316
Cow position: chr9:20393962-20393676 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 244

Conread position: 38-316
Cow position: chr9:22456236-22456518 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 221

Conread position: 41-316
Cow position: chr9:17296129-17296407 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 217

Conread position: 42-316
Cow position: chr9:27289329-27289606 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 182

Conread position: 45-314
Cow position: chr9:1855459-1855729 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 66-304
Cow position: chr9:48809717-48809955 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 191

Conread position: 66-311
Cow position: chr9:10634816-10634574 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 210, 124

Conread position: 66-315
Cow position: chr9:44914893-44914662 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 204, 59

Conread position: 66-316
Cow position: chr9:5246051-5246299 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 173, 59

Conread position: 66-316
Cow position: chr9:35904549-35904298 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 0

Conread position: 66-316
Cow position: chr9:37942983-37943230 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 14

Conread position: 68-316
Cow position: chr9:33388704-33388455 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 0

Conread position: 75-316
Cow position: chr9:64287259-64287500 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 194, 50

Conread position: 76-316
Cow position: chr9:6763835-6764076 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 191, 180

Conread position: 82-313
Cow position: chr9:1463916-1464147 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 174

Conread position: 82-316
Cow position: chr9:47389815-47390050 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 188, 174

Conread position: 84-316
Cow position: chr9:8719979-8720211 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 176, 172

Conread position: 94-316
Cow position: chr9:35129053-35129277 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 83, 164

Conread position: 100-316
Cow position: chr9:6876095-6875878 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 169, 157

Conread position: 113-308
Cow position: chr9:58958003-58957797 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 102

Conread position: 115-316
Cow position: chr9:4126299-4126498 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 154, 22

Conread position: 117-283
Cow position: chr9:63028823-63028990 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 149, 137

Conread position: 117-316
Cow position: chr9:34901353-34901155 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 56

Conread position: 121-316
Cow position: chr9:3755957-3756153 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 149, 135

Conread position: 121-316
Cow position: chr9:21413193-21412996 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 31, 136

Conread position: 122-315
Cow position: chr9:34742368-34742174 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 155, 136

Conread position: 125-316
Cow position: chr9:51691714-51691913 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 67, 139

Conread position: 132-316
Cow position: chr9:62730074-62729890 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 144, 124

Conread position: 133-316
Cow position: chr9:9752822-9752632 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 134-312
Cow position: chr9:15006514-15006328 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 140-313
Cow position: chr9:34058762-34058936 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 116

Conread position: 143-316
Cow position: chr9:52999823-52999659 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 148-316
Cow position: chr9:34919000-34918830 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 150-308
Cow position: chr9:58674043-58674200 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 117, 85

Conread position: 150-316
Cow position: chr9:7159547-7159381 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 7

Conread position: 154-316
Cow position: chr9:9260417-9260580 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 14

Conread position: 160-316
Cow position: chr9:29579932-29580089 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 96

Show alignments to all cow chromosomes.