Cow genome map
| Conread name: | rpigcb_14271.y1 |
| Conread position: | 1-227 |
| Cow position: | chr11:27817114-27817348 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 34, 125 |
| Conread position: | 1-264 |
| Cow position: | chr11:82529262-82528992 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 12, 7 |
| Conread position: | 8-264 |
| Cow position: | chr11:77772319-77772569 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 25-259 |
| Cow position: | chr11:25807379-25807620 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 13, 111 |
| Conread position: | 25-264 |
| Cow position: | chr11:10877611-10877366 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 13, 107 |
| Conread position: | 35-187 |
| Cow position: | chr11:26515499-26515344 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 37-182 |
| Cow position: | chr11:55354341-55354485 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 91 |
| Conread position: | 37-184 |
| Cow position: | chr11:26369109-26369260 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 37-187 |
| Cow position: | chr11:81336931-81337082 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 37-191 |
| Cow position: | chr11:24008440-24008290 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 89, 14 |
| Conread position: | 37-191 |
| Cow position: | chr11:77193689-77193842 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 106, 141 |
| Conread position: | 37-193 |
| Cow position: | chr11:17737661-17737506 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 106, 80 |
| Conread position: | 37-193 |
| Cow position: | chr11:21544396-21544240 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 94, 66 |
| Conread position: | 37-198 |
| Cow position: | chr11:58793660-58793815 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 37-209 |
| Cow position: | chr11:25856536-25856377 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 37-211 |
| Cow position: | chr11:18452798-18452971 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 148 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 101, 115 |
| Conread position: | 37-213 |
| Cow position: | chr11:34265745-34265565 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 71, 161 |
| Conread position: | 37-229 |
| Cow position: | chr11:77819930-77820118 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 106, 146 |
| Conread position: | 37-241 |
| Cow position: | chr11:43831462-43831665 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 137, 96 |
| Conread position: | 37-262 |
| Cow position: | chr11:57753035-57753271 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 46, 91 |
| Conread position: | 37-264 |
| Cow position: | chr11:5221083-5221312 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 87 |
| Conread position: | 37-264 |
| Cow position: | chr11:9424260-9424030 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 150, 94 |
| Conread position: | 37-264 |
| Cow position: | chr11:18153902-18154133 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 37-264 |
| Cow position: | chr11:22851384-22851153 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 110, 83 |
| Conread position: | 37-264 |
| Cow position: | chr11:34303812-34303580 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 71, 153 |
| Conread position: | 37-264 |
| Cow position: | chr11:35251642-35251877 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 37-264 |
| Cow position: | chr11:51177821-51177598 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 92, 40 |
| Conread position: | 37-264 |
| Cow position: | chr11:57153319-57153546 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 72, 38 |
| Conread position: | 37-264 |
| Cow position: | chr11:77756414-77756643 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 138, 14 |
| Conread position: | 37-269 |
| Cow position: | chr11:52859811-52859574 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 98, 160 |
| Conread position: | 38-264 |
| Cow position: | chr11:69491761-69491536 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 37, 56 |
| Conread position: | 40-239 |
| Cow position: | chr11:55119811-55119616 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 103, 26 |
| Conread position: | 40-264 |
| Cow position: | chr11:21893139-21893354 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 28, 92 |
| Conread position: | 41-191 |
| Cow position: | chr11:8087817-8087963 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 41-264 |
| Cow position: | chr11:34761384-34761598 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 102, 70 |
| Conread position: | 42-264 |
| Cow position: | chr11:34024913-34024678 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 96, 83 |
| Conread position: | 47-264 |
| Cow position: | chr11:40574433-40574657 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 79, 66 |
| Conread position: | 57-224 |
| Cow position: | chr11:34397807-34397638 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 69, 125 |
| Conread position: | 59-173 |
| Cow position: | chr11:21117502-21117387 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 63-187 |
| Cow position: | chr11:47346816-47346692 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 79, 114 |
| Conread position: | 64-262 |
| Cow position: | chr11:57062189-57061995 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 79, 27 |
| Conread position: | 66-264 |
| Cow position: | chr11:39830906-39831105 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 60, 105 |
| Conread position: | 66-264 |
| Cow position: | chr11:77763184-77763386 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 115, 71 |
| Conread position: | 74-246 |
| Cow position: | chr11:60822421-60822600 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 66, 158 |
| Conread position: | 76-268 |
| Cow position: | chr11:35284147-35283951 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 70, 8 |
| Conread position: | 116-263 |
| Cow position: | chr11:7131215-7131058 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.