Cow genome map
| Conread name: | rpigcb_14271.y1 |
| Conread position: | 14-267 |
| Cow position: | chr13:30951293-30951542 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 164 |
| Conread position: | 24-264 |
| Cow position: | chr13:38535009-38535236 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 29 |
| Conread position: | 25-193 |
| Cow position: | chr13:4518961-4519126 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 25-193 |
| Cow position: | chr13:43803305-43803136 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 159 |
| Conread position: | 26-213 |
| Cow position: | chr13:18839305-18839118 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 154 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 119, 11 |
| Conread position: | 26-264 |
| Cow position: | chr13:37498104-37497878 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 117, 11 |
| Conread position: | 26-264 |
| Cow position: | chr13:39487702-39487472 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 11 |
| Conread position: | 36-176 |
| Cow position: | chr13:51142641-51142780 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 87 |
| Conread position: | 36-263 |
| Cow position: | chr13:19115782-19115570 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 37-155 |
| Cow position: | chr13:11223053-11223174 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 37-191 |
| Cow position: | chr13:7803917-7804067 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 37-191 |
| Cow position: | chr13:26255361-26255512 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 37-193 |
| Cow position: | chr13:17127386-17127542 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 87, 98 |
| Conread position: | 37-193 |
| Cow position: | chr13:57746188-57746028 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 72, 80 |
| Conread position: | 37-261 |
| Cow position: | chr13:34885344-34885116 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 218 |
| Conread position: | 37-262 |
| Cow position: | chr13:24676034-24675818 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 33, 145 |
| Conread position: | 37-264 |
| Cow position: | chr13:25955258-25955472 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 37-264 |
| Cow position: | chr13:46464450-46464671 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 90 |
| Conread position: | 37-264 |
| Cow position: | chr13:47325523-47325757 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 96 |
| Conread position: | 37-264 |
| Cow position: | chr13:51241092-51240875 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 37-264 |
| Cow position: | chr13:62271760-62271980 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 38-220 |
| Cow position: | chr13:21878314-21878498 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 103, 44 |
| Conread position: | 38-262 |
| Cow position: | chr13:55407033-55406814 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 108, 30 |
| Conread position: | 39-210 |
| Cow position: | chr13:26943173-26942998 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 149 |
| Conread position: | 40-204 |
| Cow position: | chr13:28605780-28605608 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 40-263 |
| Cow position: | chr13:17169561-17169346 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 45-187 |
| Cow position: | chr13:20656687-20656546 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 45-187 |
| Cow position: | chr13:28590423-28590272 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 45-223 |
| Cow position: | chr13:50662100-50661920 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 56 |
| Conread position: | 46-191 |
| Cow position: | chr13:4546292-4546440 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 82, 144 |
| Conread position: | 46-193 |
| Cow position: | chr13:15746863-15747007 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 47-191 |
| Cow position: | chr13:17319955-17320099 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 93, 28 |
| Conread position: | 50-193 |
| Cow position: | chr13:15731212-15731353 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 47 |
| Conread position: | 51-193 |
| Cow position: | chr13:33239869-33239726 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 54-264 |
| Cow position: | chr13:12325454-12325257 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 136, 27 |
| Conread position: | 58-259 |
| Cow position: | chr13:34336611-34336415 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 59-193 |
| Cow position: | chr13:25005427-25005291 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 60-263 |
| Cow position: | chr13:30834172-30833983 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 70-269 |
| Cow position: | chr13:46373134-46373323 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 97, 53 |
| Conread position: | 72-263 |
| Cow position: | chr13:34264755-34264950 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 72-264 |
| Cow position: | chr13:45497602-45497404 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 72-264 |
| Cow position: | chr13:59997689-59997883 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 73, 99 |
| Conread position: | 74-248 |
| Cow position: | chr13:44144073-44144252 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 76-195 |
| Cow position: | chr13:20243746-20243627 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 110, 5 |
| Conread position: | 80-238 |
| Cow position: | chr13:15489754-15489590 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 81-262 |
| Cow position: | chr13:11441676-11441501 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 85-252 |
| Cow position: | chr13:698504-698322 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 42 |
| Conread position: | 87-264 |
| Cow position: | chr13:4794194-4794012 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 126 |
| Conread position: | 105-264 |
| Cow position: | chr13:38361972-38362132 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 91, 24 |
Show alignments to all cow chromosomes.