Cow genome map
| Conread name: | rpigcb_14271.y1 |
| Conread position: | 1-130 |
| Cow position: | chr2:23811531-23811401 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 21-264 |
| Cow position: | chr2:74387744-74387989 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 17, 106 |
| Conread position: | 21-307 |
| Cow position: | chr2:72599199-72598906 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 11, 98 |
| Conread position: | 25-193 |
| Cow position: | chr2:65463182-65463352 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 33-264 |
| Cow position: | chr2:47746594-47746364 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 108, 44 |
| Conread position: | 34-264 |
| Cow position: | chr2:7779113-7779356 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 35-266 |
| Cow position: | chr2:24884361-24884130 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 57, 97 |
| Conread position: | 37-192 |
| Cow position: | chr2:9043562-9043403 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 37-193 |
| Cow position: | chr2:717443-717597 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 37-205 |
| Cow position: | chr2:16123035-16123201 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 37-206 |
| Cow position: | chr2:13048583-13048411 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 143 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 37-262 |
| Cow position: | chr2:21697356-21697590 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 105, 90 |
| Conread position: | 37-264 |
| Cow position: | chr2:33791119-33791340 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 37-264 |
| Cow position: | chr2:43344929-43345152 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 37-264 |
| Cow position: | chr2:53716623-53716841 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 98, 14 |
| Conread position: | 37-264 |
| Cow position: | chr2:62673884-62674099 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 105, 93 |
| Conread position: | 37-264 |
| Cow position: | chr2:64073920-64073685 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 96 |
| Conread position: | 37-264 |
| Cow position: | chr2:77968149-77968362 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 37-269 |
| Cow position: | chr2:18249519-18249746 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 102, 66 |
| Conread position: | 38-191 |
| Cow position: | chr2:4478155-4478003 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 132, 95 |
| Conread position: | 38-264 |
| Cow position: | chr2:39196410-39196638 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 148, 31 |
| Conread position: | 39-184 |
| Cow position: | chr2:32406069-32406212 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 39-194 |
| Cow position: | chr2:11340796-11340950 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 138 |
| Conread position: | 39-264 |
| Cow position: | chr2:42286138-42286377 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 142, 35 |
| Conread position: | 39-267 |
| Cow position: | chr2:7212155-7211930 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 40-226 |
| Cow position: | chr2:41163042-41162853 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 99, 79 |
| Conread position: | 41-307 |
| Cow position: | chr2:3296549-3296294 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 234, 86 |
| Conread position: | 43-244 |
| Cow position: | chr2:37003653-37003456 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 93, 88 |
| Conread position: | 45-193 |
| Cow position: | chr2:74848199-74848052 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 53-184 |
| Cow position: | chr2:4927727-4927851 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 56-172 |
| Cow position: | chr2:19651721-19651603 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 57-260 |
| Cow position: | chr2:31490575-31490379 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 126, 43 |
| Conread position: | 64-264 |
| Cow position: | chr2:6820057-6820245 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 68-187 |
| Cow position: | chr2:41490966-41490849 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 73-264 |
| Cow position: | chr2:71121355-71121162 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 80-264 |
| Cow position: | chr2:14037390-14037572 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 113, 56 |
| Conread position: | 81-264 |
| Cow position: | chr2:32393727-32393546 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 70, 148 |
| Conread position: | 81-264 |
| Cow position: | chr2:76055237-76055418 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 109, 7 |
| Conread position: | 101-264 |
| Cow position: | chr2:27145055-27145221 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.