Cow genome map
| Conread name: | rpigcb_14271.y1 |
| Conread position: | 22-264 |
| Cow position: | chr3:16115923-16115692 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 25-191 |
| Cow position: | chr3:8753810-8753636 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 147 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 25-206 |
| Cow position: | chr3:84153654-84153468 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 34-173 |
| Cow position: | chr3:74846390-74846530 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 35-260 |
| Cow position: | chr3:27633672-27633895 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 37-131 |
| Cow position: | chr3:56164096-56164001 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 37-174 |
| Cow position: | chr3:60947861-60947997 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 37-183 |
| Cow position: | chr3:65392392-65392244 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 37 |
| Conread position: | 37-193 |
| Cow position: | chr3:55896942-55896787 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 149, 96 |
| Conread position: | 37-204 |
| Cow position: | chr3:46134856-46135030 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 37-208 |
| Cow position: | chr3:17519459-17519635 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 153 |
| Conread position: | 37-209 |
| Cow position: | chr3:23274637-23274812 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 86, 14 |
| Conread position: | 37-225 |
| Cow position: | chr3:43967081-43967273 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 91 |
| Conread position: | 37-248 |
| Cow position: | chr3:36538590-36538811 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 106, 89 |
| Conread position: | 37-260 |
| Cow position: | chr3:23478562-23478346 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 52, 93 |
| Conread position: | 37-260 |
| Cow position: | chr3:56711301-56711534 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 37-264 |
| Cow position: | chr3:77157651-77157442 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 37-269 |
| Cow position: | chr3:77468286-77468060 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 108, 48 |
| Conread position: | 38-187 |
| Cow position: | chr3:79315511-79315363 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 38-252 |
| Cow position: | chr3:27879648-27879870 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 97, 38 |
| Conread position: | 39-191 |
| Cow position: | chr3:39273398-39273549 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 121, 98 |
| Conread position: | 39-264 |
| Cow position: | chr3:56042391-56042611 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 104, 37 |
| Conread position: | 39-267 |
| Cow position: | chr3:32773526-32773314 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 40-269 |
| Cow position: | chr3:21332476-21332695 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 41-283 |
| Cow position: | chr3:24532144-24531918 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 97, 86 |
| Conread position: | 43-263 |
| Cow position: | chr3:8275771-8275553 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 174, 84 |
| Conread position: | 44-193 |
| Cow position: | chr3:40269229-40269375 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 142, 57 |
| Conread position: | 44-261 |
| Cow position: | chr3:26581746-26581953 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 83 |
| Conread position: | 46-191 |
| Cow position: | chr3:23888068-23887919 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 46-192 |
| Cow position: | chr3:26531805-26531950 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 46-192 |
| Cow position: | chr3:31924586-31924732 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-267 |
| Cow position: | chr3:55460174-55460387 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 91, 104 |
| Conread position: | 51-193 |
| Cow position: | chr3:50499900-50499758 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-264 |
| Cow position: | chr3:1549600-1549394 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 73, 39 |
| Conread position: | 80-256 |
| Cow position: | chr3:85086154-85085978 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 80-264 |
| Cow position: | chr3:80928637-80928827 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 65, 50 |
| Conread position: | 92-263 |
| Cow position: | chr3:35051313-35051146 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 131-269 |
| Cow position: | chr3:69148567-69148697 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.