Cow genome map
| Conread name: | rpigcb_14271.y1 |
| Conread position: | 1-204 |
| Cow position: | chr6:1940043-1940233 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 145, 33 |
| Conread position: | 22-168 |
| Cow position: | chr6:28087097-28087246 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 25-264 |
| Cow position: | chr6:44377679-44377445 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 25-264 |
| Cow position: | chr6:45617017-45617255 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 13, 52 |
| Conread position: | 26-167 |
| Cow position: | chr6:55662140-55662003 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 33-264 |
| Cow position: | chr6:5678647-5678866 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 6, 29 |
| Conread position: | 36-192 |
| Cow position: | chr6:46627403-46627247 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 36-248 |
| Cow position: | chr6:29078130-29077923 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 48 |
| Conread position: | 37-176 |
| Cow position: | chr6:26692731-26692871 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 90 |
| Conread position: | 37-197 |
| Cow position: | chr6:55659587-55659758 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 37-202 |
| Cow position: | chr6:53416568-53416727 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 156, 72 |
| Conread position: | 37-205 |
| Cow position: | chr6:32428839-32428677 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 106, 26 |
| Conread position: | 37-248 |
| Cow position: | chr6:29082669-29082867 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 37-264 |
| Cow position: | chr6:6244522-6244728 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 101, 39 |
| Conread position: | 37-264 |
| Cow position: | chr6:6635540-6635319 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 42 |
| Conread position: | 37-264 |
| Cow position: | chr6:23891948-23891736 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 37-264 |
| Cow position: | chr6:41557879-41557647 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 66, 81 |
| Conread position: | 37-264 |
| Cow position: | chr6:62754094-62754314 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 106, 42 |
| Conread position: | 39-201 |
| Cow position: | chr6:64889841-64889682 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 39-264 |
| Cow position: | chr6:45692265-45692480 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 101, 88 |
| Conread position: | 39-264 |
| Cow position: | chr6:69274382-69274610 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 92, 42 |
| Conread position: | 39-303 |
| Cow position: | chr6:3374029-3374307 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 68, 255 |
| Conread position: | 41-193 |
| Cow position: | chr6:58954141-58953990 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 95, 87 |
| Conread position: | 42-183 |
| Cow position: | chr6:11035495-11035636 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 25 |
| Conread position: | 44-290 |
| Cow position: | chr6:4666397-4666638 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 103, 132 |
| Conread position: | 47-192 |
| Cow position: | chr6:64063575-64063716 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 138, 48 |
| Conread position: | 47-264 |
| Cow position: | chr6:41157616-41157408 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 48-261 |
| Cow position: | chr6:19459437-19459221 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 95, 116 |
| Conread position: | 53-190 |
| Cow position: | chr6:29299939-29299802 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 54-209 |
| Cow position: | chr6:40299034-40299189 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 69, 92 |
| Conread position: | 67-264 |
| Cow position: | chr6:39293260-39293068 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 79, 26 |
| Conread position: | 73-189 |
| Cow position: | chr6:6722508-6722392 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 73-264 |
| Cow position: | chr6:11159633-11159827 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 197-467 |
| Cow position: | chr6:1940801-1941067 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 62 |
Show alignments to all cow chromosomes.