Cow genome map
| Conread name: | rpigcb_14271.y1 |
| Conread position: | 2-191 |
| Cow position: | chr7:6532900-6533092 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 50, 119 |
| Conread position: | 8-188 |
| Cow position: | chr7:59164324-59164149 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 24-264 |
| Cow position: | chr7:27709236-27709485 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 110, 15 |
| Conread position: | 30-192 |
| Cow position: | chr7:5247529-5247692 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 31-191 |
| Cow position: | chr7:62048818-62048662 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 34-262 |
| Cow position: | chr7:67499095-67498877 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 36-258 |
| Cow position: | chr7:11592818-11593034 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 142, 94 |
| Conread position: | 37-186 |
| Cow position: | chr7:5435484-5435634 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 37-186 |
| Cow position: | chr7:5447902-5448052 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 37-189 |
| Cow position: | chr7:59844856-59844705 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 144, 80 |
| Conread position: | 37-200 |
| Cow position: | chr7:52131522-52131360 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 134, 88 |
| Conread position: | 37-256 |
| Cow position: | chr7:45064018-45064236 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 101, 29 |
| Conread position: | 37-264 |
| Cow position: | chr7:13823191-13822961 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 37-264 |
| Cow position: | chr7:29377749-29377973 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 37-264 |
| Cow position: | chr7:39512201-39512423 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 37-264 |
| Cow position: | chr7:61425971-61425731 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 192 |
| Conread position: | 37-264 |
| Cow position: | chr7:64366954-64366736 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 37-264 |
| Cow position: | chr7:65953004-65953223 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 113, 58 |
| Conread position: | 37-267 |
| Cow position: | chr7:5701319-5701093 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 88 |
| Conread position: | 37-267 |
| Cow position: | chr7:42222022-42222259 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 101, 56 |
| Conread position: | 37-267 |
| Cow position: | chr7:63328498-63328254 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 40, 218 |
| Conread position: | 39-191 |
| Cow position: | chr7:3626744-3626595 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 104, 35 |
| Conread position: | 39-264 |
| Cow position: | chr7:20104616-20104841 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 86 |
| Conread position: | 44-187 |
| Cow position: | chr7:32588906-32588769 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 99, 22 |
| Conread position: | 44-189 |
| Cow position: | chr7:12163549-12163407 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 44-193 |
| Cow position: | chr7:45722119-45721972 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 80, 38 |
| Conread position: | 45-192 |
| Cow position: | chr7:33062379-33062521 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 132, 32 |
| Conread position: | 52-191 |
| Cow position: | chr7:45099610-45099475 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 91, 33 |
| Conread position: | 53-193 |
| Cow position: | chr7:49893295-49893432 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 123, 72 |
| Conread position: | 56-263 |
| Cow position: | chr7:1397901-1398102 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 35, 133 |
| Conread position: | 57-185 |
| Cow position: | chr7:68246692-68246563 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 58-264 |
| Cow position: | chr7:62516390-62516186 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 114, 80 |
| Conread position: | 62-193 |
| Cow position: | chr7:54061704-54061835 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 65-184 |
| Cow position: | chr7:53408942-53408824 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 73, 102 |
| Conread position: | 66-193 |
| Cow position: | chr7:53358658-53358785 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 109, 59 |
| Conread position: | 74-264 |
| Cow position: | chr7:68367177-68367372 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 62, 28 |
| Conread position: | 76-239 |
| Cow position: | chr7:28560689-28560851 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 6, 96 |
| Conread position: | 87-264 |
| Cow position: | chr7:2967490-2967309 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 43, 10 |
| Conread position: | 92-264 |
| Cow position: | chr7:34798597-34798430 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.