Cow genome map
| Conread name: | rpigcb_14271.y1 |
| Conread position: | 1-264 |
| Cow position: | chr8:19369081-19369343 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 133 |
| Conread position: | 1-267 |
| Cow position: | chr8:45686036-45686301 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 34, 131 |
| Conread position: | 23-264 |
| Cow position: | chr8:7104030-7104269 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 163, 18 |
| Conread position: | 24-193 |
| Cow position: | chr8:42399749-42399919 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 106 |
| Conread position: | 25-196 |
| Cow position: | chr8:18810808-18810637 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 107 |
| Conread position: | 36-233 |
| Cow position: | chr8:53891900-53891690 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 36-264 |
| Cow position: | chr8:4336692-4336924 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 36-264 |
| Cow position: | chr8:11792583-11792350 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 99, 15 |
| Conread position: | 37-123 |
| Cow position: | chr8:18801604-18801518 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 75 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-129 |
| Cow position: | chr8:31185377-31185285 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-141 |
| Cow position: | chr8:18883191-18883089 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 37-173 |
| Cow position: | chr8:14617528-14617669 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 37-182 |
| Cow position: | chr8:31262780-31262634 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 37-183 |
| Cow position: | chr8:11974824-11974680 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 109, 64 |
| Conread position: | 37-184 |
| Cow position: | chr8:51443194-51443334 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 37-190 |
| Cow position: | chr8:41411599-41411444 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 91, 60 |
| Conread position: | 37-190 |
| Cow position: | chr8:43379712-43379556 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 37-191 |
| Cow position: | chr8:47128936-47128784 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 101, 70 |
| Conread position: | 37-191 |
| Cow position: | chr8:51633833-51633991 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 35, 112 |
| Conread position: | 37-192 |
| Cow position: | chr8:21945795-21945639 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 85, 97 |
| Conread position: | 37-193 |
| Cow position: | chr8:51562397-51562241 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 37-197 |
| Cow position: | chr8:33818866-33819028 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 103, 93 |
| Conread position: | 37-213 |
| Cow position: | chr8:36687039-36686861 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 106, 85 |
| Conread position: | 37-229 |
| Cow position: | chr8:48682129-48682319 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 146, 53 |
| Conread position: | 37-262 |
| Cow position: | chr8:22102826-22103053 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 86, 151 |
| Conread position: | 37-264 |
| Cow position: | chr8:18725583-18725357 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 131, 88 |
| Conread position: | 37-264 |
| Cow position: | chr8:21078902-21078677 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 37-264 |
| Cow position: | chr8:30021556-30021779 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 37-264 |
| Cow position: | chr8:33438153-33437938 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 109, 15 |
| Conread position: | 37-264 |
| Cow position: | chr8:54159104-54158881 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 38-263 |
| Cow position: | chr8:5874513-5874300 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 38-264 |
| Cow position: | chr8:20341344-20341564 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 108, 41 |
| Conread position: | 39-201 |
| Cow position: | chr8:37381503-37381353 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 39-208 |
| Cow position: | chr8:54828605-54828437 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 99, 24 |
| Conread position: | 39-264 |
| Cow position: | chr8:23440741-23440981 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 39-266 |
| Cow position: | chr8:952392-952176 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 175, 68 |
| Conread position: | 40-202 |
| Cow position: | chr8:9986095-9985929 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 98, 111 |
| Conread position: | 41-261 |
| Cow position: | chr8:40273279-40273493 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 41-264 |
| Cow position: | chr8:40432504-40432718 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 100 |
| Conread position: | 44-192 |
| Cow position: | chr8:20925969-20926112 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 46-184 |
| Cow position: | chr8:59472820-59472960 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 9 |
| Conread position: | 51-189 |
| Cow position: | chr8:12790529-12790665 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 33, 117 |
| Conread position: | 73-264 |
| Cow position: | chr8:2974986-2974798 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 80-197 |
| Cow position: | chr8:8610875-8610992 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 83-264 |
| Cow position: | chr8:27369411-27369235 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 93 |
| Conread position: | 102-264 |
| Cow position: | chr8:21118958-21119127 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 102-267 |
| Cow position: | chr8:31887037-31886875 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 41, 68 |
Show alignments to all cow chromosomes.