Cow genome map
| Conread name: | rpigcb_17669.y1 |
| Conread position: | 1-289 |
| Cow position: | chr17:22451965-22451677 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 237, 231 |
| Conread position: | 1-369 |
| Cow position: | chr17:22551848-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 225, 234 |
| Conread position: | 1-433 |
| Cow position: | chr17:41440623-41440191 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 324, 333 |
| Conread position: | 1-438 |
| Cow position: | chr17:22498979-22498542 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 223, 215 |
| Conread position: | 1-491 |
| Cow position: | chr17:41440791-41440301 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 90, 77 |
| Conread position: | 1-504 |
| Cow position: | chr17:22590190-22589687 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 301 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 383, 404 |
| Conread position: | 1-510 |
| Cow position: | chr17:22473414-22473923 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 115 |
| Conread position: | 1-512 |
| Cow position: | chr17:22452217-22451706 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 182 |
| Conread position: | 1-512 |
| Cow position: | chr17:22452301-22451790 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 1-512 |
| Cow position: | chr17:22452385-22451874 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 120 |
| Conread position: | 1-512 |
| Cow position: | chr17:22552100-22551589 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 312 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 134, 139 |
| Conread position: | 1-512 |
| Cow position: | chr17:22552268-22551757 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 139 |
| Conread position: | 1-512 |
| Cow position: | chr17:22552436-22551925 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 323 |
| Conread position: | 1-512 |
| Cow position: | chr17:22589770-22589259 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 1-512 |
| Cow position: | chr17:22590106-22589595 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 316 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 238, 225 |
| Conread position: | 1-514 |
| Cow position: | chr17:22499231-22498718 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 316 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 309, 323 |
| Conread position: | 1-514 |
| Cow position: | chr17:22499315-22498802 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-514 |
| Cow position: | chr17:22552016-22551501 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 1-514 |
| Cow position: | chr17:22552520-22552007 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-514 |
| Cow position: | chr17:22552688-22552175 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 1-514 |
| Cow position: | chr17:22552772-22552259 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-514 |
| Cow position: | chr17:22589854-22589341 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 311 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 62, 49 |
| Conread position: | 1-515 |
| Cow position: | chr17:22552184-22551670 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 229 |
| Conread position: | 1-516 |
| Cow position: | chr17:41441043-41440528 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 173, 156 |
| Conread position: | 1-519 |
| Cow position: | chr17:22552940-22552422 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 323 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 1-520 |
| Cow position: | chr17:41440959-41440440 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 308 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 260, 255 |
| Conread position: | 2-496 |
| Cow position: | chr17:22499398-22498904 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 300 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-381 |
| Cow position: | chr17:22589599-22589222 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 4-476 |
| Cow position: | chr17:22553105-22552633 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 131, 136 |
| Conread position: | 7-495 |
| Cow position: | chr17:44467442-44467930 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 376, 399 |
| Conread position: | 7-512 |
| Cow position: | chr17:22473336-22473841 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 302 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 231, 225 |
| Conread position: | 10-495 |
| Cow position: | chr17:41441118-41440633 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 222, 240 |
| Conread position: | 22-467 |
| Cow position: | chr17:22590253-22589808 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 289 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 33, 40 |
| Conread position: | 31-506 |
| Cow position: | chr17:41440677-41440202 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 60-453 |
| Cow position: | chr17:22551873-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 154, 169 |
| Conread position: | 61-496 |
| Cow position: | chr17:22552544-22552109 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 173 |
| Conread position: | 61-512 |
| Cow position: | chr17:22452409-22451958 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 255 |
| Conread position: | 62-512 |
| Cow position: | chr17:22553131-22552681 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 275 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 164, 171 |
| Conread position: | 70-514 |
| Cow position: | chr17:22552283-22551839 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 164 |
| Conread position: | 81-467 |
| Cow position: | chr17:22473326-22473712 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 307, 303 |
| Conread position: | 86-512 |
| Cow position: | chr17:22499398-22498972 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 390, 383 |
| Conread position: | 96-503 |
| Cow position: | chr17:41441116-41440709 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 229, 238 |
| Conread position: | 99-511 |
| Cow position: | chr17:22590260-22589848 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 119, 125 |
| Conread position: | 115-512 |
| Cow position: | chr17:22473276-22473673 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 254 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 200, 190 |
| Conread position: | 185-503 |
| Cow position: | chr17:22473262-22473580 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-516 |
| Cow position: | chr17:22452410-22452122 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 18, 23 |
Show alignments to all cow chromosomes.