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Cow genome map

           
Conread name:
           
rpigcb_17669.y1
        

               
Conread position:
               
1-189
               

               
Cow position:
               
chr18:43053378-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr18:53560595-53560822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:42984723-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr18:40251172-40251432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr18:55524061-55524335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr18:1418335-1418610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr18:56247402-56247116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:43048647-43048350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
198, 194
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr18:50282007-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:14453207-14452870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:49022979-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:51789056-51788719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr18:56329182-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr18:1418251-1418594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr18:42744132-42743789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
314, 308
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr18:41198412-41198756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr18:54968203-54968554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr18:33063933-33063577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr18:53571976-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
102, 24
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr18:54993741-54994094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 37
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr18:55066693-55066328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr18:50271794-50272171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
128, 139
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr18:43048731-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr18:53571892-53572258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr18:40324299-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
351, 0
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr18:50281923-50282306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
134, 144
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr18:42984891-42984470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr18:43022402-43021981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
314, 302
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr18:43168125-43168546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr18:44240426-44240847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr18:50246410-50246838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 47
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr18:53498557-53498987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr18:56391266-56390832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
61, 56
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr18:33064017-33063581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
214, 227
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr18:51400781-51401218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr18:43174939-43174497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr18:52428554-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr18:52433735-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:53586330-53585879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 316
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr18:51751918-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr18:55018213-55018671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 47
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr18:52012026-52011566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 270
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr18:22634721-22635183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:40086939-40086474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
223, 163
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:40306502-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:41198076-41198539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:42959882-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
110, 114
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:50281755-50282219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:54993405-54993868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:56434210-56434673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 307
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr18:50099728-50100192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr18:50295437-50295900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
132, 144
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr18:33093025-33092560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 109
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr18:42791045-42791510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 406
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr18:50048722-50048262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
134, 145
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr18:50848332-50848797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
134, 144
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr18:33064689-33064223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 239
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr18:33092941-33092475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
208, 229
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr18:43119990-43119524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr18:44184721-44184255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 55
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr18:51789392-51788926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
1-469
               

               
Cow position:
               
chr18:55008556-55009024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 146
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr18:50083783-50084252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 142
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr18:56247994-56247514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
111, 99
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr18:42827485-42827961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
134, 139
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr18:14453939-14453464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
242, 250
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr18:42792305-42792780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr18:50849004-50849479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr18:56316382-56316857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr18:50048806-50048330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr18:56494093-56494569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 408
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:1417999-1418480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 114
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:41197656-41198137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 224
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:41198244-41198725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 400
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr18:54967116-54967597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr18:56329938-56329448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr18:53635963-53635469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
328, 334
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr18:56316550-56317044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
475, 468
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr18:50059290-50058795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr18:53509655-53510154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 154
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:56329854-56329356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 55
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr18:51368185-51367687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
312, 323
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:1418083-1418585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:40075104-40075606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:43167789-43168291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:49022811-49023313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 196
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:49032629-49032127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:49032881-49032379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:49033217-49032715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:50246158-50246660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:52012194-52011692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:52012362-52011860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
177, 185
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:52012445-52011944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
471, 36
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:55523473-55523975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 114
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:56316298-56316800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:56316466-56316968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:40086265-40085772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:41949099-41948596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:41949351-41948848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 221
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:42960302-42959799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:42984975-42984472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:43022486-43021983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 239
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:43022738-43022235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
222, 230
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:43093337-43092834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 143
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:43093997-43093506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
270, 0
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:43120242-43119739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:44240342-44240845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 316
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:44398022-44397519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 197
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:50099812-50100315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
133, 142
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr18:44253894-44253390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:33064185-33063679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:41948931-41948425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:42744300-42743794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:43175023-43174517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:44184805-44184299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
69, 55
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:52428386-52428892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:52433567-52434073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:55008892-55009397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:56329350-56328844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr18:49032545-49032038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 316
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr18:50083531-50084040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 229
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr18:51765917-51765408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr18:51874060-51874562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
199, 108
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:40086855-40086343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:40306838-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:50022238-50021722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:51789308-51788798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:51812467-51811957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
41, 61
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:53498050-53498563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
247, 420
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:33064269-33063758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
238, 231
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:33064605-33064094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:40306754-40307265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:40324467-40323956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 221
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:40324635-40324124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:41197908-41198419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:41197992-41198503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:41949015-41948504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 322
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:41949267-41948756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42675072-42674561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42675156-42674645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42744552-42744041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42791381-42791892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42791801-42792312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 139
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42791885-42792396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42792053-42792564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 139
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42792137-42792648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 139
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42837687-42837176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42959966-42959464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
310, 216
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42985143-42984632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
222, 234
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42985227-42984716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 232
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:42985479-42984968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 230
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:43022570-43022059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 323
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:43022990-43022479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:43093673-43093162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:43167873-43168384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
110, 115
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:43175443-43174932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:44154457-44153944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:44184553-44184042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 220
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:44239838-44240349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
147, 154
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:44240258-44240769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:44253974-44253467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:44398274-44397763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
473, 487
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:49032797-49032286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:49032965-49032454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:49033049-49032538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:49033301-49032790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50059122-50058611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 315
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50059542-50059031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
136, 131
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50083363-50083874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50083615-50084126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50099056-50099567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
133, 144
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50099392-50099903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50245990-50246501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50271626-50272137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50848584-50849095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
134, 140
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50848752-50849263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
299, 313
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:50848920-50849431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
131, 139
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51368353-51367842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51400445-51400956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 61
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51400613-51401124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51400697-51401208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51752170-51751659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51765497-51764986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51789728-51789217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51812551-51812040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51812635-51812124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:51812887-51812376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52427882-52428393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
217, 225
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52433063-52433574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52447021-52447532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
47, 58
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52447441-52447952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:52447693-52448204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:53610302-53609791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
407, 402
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:53635627-53635116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 402
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:56247648-56247145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
129, 140
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:56329434-56328923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 229
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr18:56329686-56329175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 250
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr18:40074936-40075448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr18:42837603-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 316
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr18:50058870-50058361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
307, 293
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:33064437-33063924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 239
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:40306670-40307183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:40324551-40324038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:40324803-40324290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:41197740-41198253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 140
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:41197824-41198337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:42674904-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:42674988-42674475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:42744384-42743871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 323
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:42744468-42743955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 239
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:42790961-42791474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 140
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:42791297-42791810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
134, 139
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:42791969-42792482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:42792389-42792904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 319
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:42837771-42837258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 57
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:42960050-42959546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:43093421-43092908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 228
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:43175527-43175014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:44240090-44240603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
229, 216
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:44398358-44397845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 309
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:49033133-49032620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 239
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:50059038-50058525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:50246326-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:51400529-51401042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 114
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:52447777-52448290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 115
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:53509487-53509998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:53525941-53526452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 49
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:53635543-53635029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:55018381-55018893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 47
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:55523389-55523902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 196
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:56128622-56129136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:56329518-56329005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr18:56434378-56434890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 144
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:41948847-41948331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
134, 154
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:41949183-41948669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:44398106-44397592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:50030904-50030387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:50083699-50084213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 142
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:50246242-50246756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:52433483-52433997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:53610218-53609704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr18:55523557-55524071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 292
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:33064941-33064426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 109
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:42791717-42792232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 140
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:50021983-50021465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:50048890-50048375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr18:55066945-55066430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 406
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:53498308-53498822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 142
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr18:53525773-53526290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 73
               

               
Conread position:
               
1-519
               

               
Cow position:
               
chr18:22634637-22635155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 227
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:22634555-22635072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:40306334-40306854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 167
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:40306586-40307105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 401
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:42791213-42791732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:42792221-42792740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 226
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:42985311-42984792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
228, 214
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:43093589-43093070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 400
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:43175107-43174587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:44184637-44184118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
145, 133
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:44398190-44397671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:50099560-50100079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
134, 145
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:50848836-50849355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
134, 139
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:52012278-52011759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
480, 467
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:52427714-52428233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:52428134-52428653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:52428302-52428820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 316
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:52433315-52433834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:52447105-52447624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
260, 254
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53498218-53498740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 151
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53509319-53509838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 73
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53509403-53509922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53525857-53526376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53559755-53560274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53559839-53560358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53559923-53560442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
445, 462
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53560091-53560610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
454, 467
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53560175-53560694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53586582-53586063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53586834-53586315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 313
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53587002-53586483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 229
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:53635795-53635276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 248
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54967284-54967800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54967536-54968050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54979473-54979992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
378, 387
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54979641-54980160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54979725-54980244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 314
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54979809-54980328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54980229-54980745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54992733-54993252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54992817-54993336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54992901-54993420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54992985-54993504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
472, 467
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:54993237-54993756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:55008724-55009243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 314
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:55017793-55018312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:55018045-55018564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:55018129-55018648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:55067029-55066510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:55523725-55524244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 125
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:55523809-55524328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 225
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:56128202-56128721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
326, 333
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:56128538-56129057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 312
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:56330106-56329587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 109
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:56493841-56494360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 145
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chr18:56493925-56494444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 75
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr18:42791129-42791649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr18:53498641-53499154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 249
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr18:53586498-53585979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
512, 0
               

               
Conread position:
               
1-521
               

               
Cow position:
               
chr18:55008640-55009160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 118
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr18:56316130-56316652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
513, 0
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:55008474-55008994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 82
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:55066861-55066339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 403
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chr18:56316214-56316737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 114
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr18:50059458-50058934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr18:56330022-56329498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 230
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr18:44184469-44183943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 134
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr18:43175191-43174663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr18:51789476-51788948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr18:51812719-51812191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr18:53560259-53560792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
387, 404
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr18:42724423-42723891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
177, 185
               

               
Conread position:
               
1-630
               

               
Cow position:
               
chr18:40075188-40075814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 270
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr18:56434631-56434994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr18:41948762-41948384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
308, 315
               

               
Conread position:
               
2-466
               

               
Cow position:
               
chr18:33065024-33064560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
2-485
               

               
Cow position:
               
chr18:53636046-53635563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-485
               

               
Cow position:
               
chr18:56128119-56128602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
386, 394
               

               
Conread position:
               
2-503
               

               
Cow position:
               
chr18:42837854-42837353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 322
               

               
Conread position:
               
2-504
               

               
Cow position:
               
chr18:56247563-56247071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr18:14453290-14452779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr18:40306251-40306761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr18:42675491-42674981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
52, 59
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr18:43022905-43022395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr18:56248161-56247641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
2-514
               

               
Cow position:
               
chr18:54993070-54993582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
2-518
               

               
Cow position:
               
chr18:56434295-56434809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
2-520
               

               
Cow position:
               
chr18:42693798-42693280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
2-520
               

               
Cow position:
               
chr18:52427799-52428317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-520
               

               
Cow position:
               
chr18:52433148-52433666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 298
               

               
Conread position:
               
2-520
               

               
Cow position:
               
chr18:54966949-54967467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 226
               

               
Conread position:
               
2-520
               

               
Cow position:
               
chr18:55523306-55523824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 312
               

               
Conread position:
               
2-520
               

               
Cow position:
               
chr18:56316047-56316566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
2-523
               

               
Cow position:
               
chr18:56433550-56434069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
148, 98
               

               
Conread position:
               
2-529
               

               
Cow position:
               
chr18:42827402-42827929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr18:22634975-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 48
               

               
Conread position:
               
3-323
               

               
Cow position:
               
chr18:53560513-53560829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
133, 152
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr18:42984805-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr18:43022316-43021979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 58
               

               
Conread position:
               
3-340
               

               
Cow position:
               
chr18:44240512-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
307, 314
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr18:1418168-1418587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 138
               

               
Conread position:
               
3-443
               

               
Cow position:
               
chr18:55523895-55524335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
128, 143
               

               
Conread position:
               
3-444
               

               
Cow position:
               
chr18:55066775-55066334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 224
               

               
Conread position:
               
3-461
               

               
Cow position:
               
chr18:51969340-51969796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
298, 274
               

               
Conread position:
               
3-470
               

               
Cow position:
               
chr18:40324717-40324250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 58
               

               
Conread position:
               
3-479
               

               
Cow position:
               
chr18:54993575-54994049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
3-486
               

               
Cow position:
               
chr18:53635877-53635394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 248
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr18:56128288-56128777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
3-503
               

               
Cow position:
               
chr18:33064771-33064271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 146
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr18:42744718-42744217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr18:42985561-42985060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr18:43022820-43022319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
304, 319
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr18:43093503-43093002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 137
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr18:42744634-42744125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 314
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr18:42985057-42984548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 314
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr18:43094078-43093582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr18:44240008-44240517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
303, 314
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr18:53635709-53635200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr18:56128456-56128965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-514
               

               
Cow position:
               
chr18:43093251-43092742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
487, 418
               

               
Conread position:
               
3-514
               

               
Cow position:
               
chr18:44154284-44153778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 301
               

               
Conread position:
               
3-514
               

               
Cow position:
               
chr18:44184887-44184376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 220
               

               
Conread position:
               
3-514
               

               
Cow position:
               
chr18:51368435-51367924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
3-514
               

               
Cow position:
               
chr18:54979307-54979818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-515
               

               
Cow position:
               
chr18:55018299-55018812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 291
               

               
Conread position:
               
3-519
               

               
Cow position:
               
chr18:54993491-54994004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:42675238-42674721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
465, 472
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:52427548-52428065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:53509237-53509754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:53525691-53526208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:53560009-53560526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 305
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:53587084-53586567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 143
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:54967034-54967551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 112
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:54968037-54968554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:54979559-54980076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 303
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:54980147-54980663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:54993323-54993840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 284
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:55008810-55009327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:55017632-55018144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 5
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:55017879-55018396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 52
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:55017963-55018480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:55067111-55066594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 401
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:56128372-56128889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 246
               

               
Conread position:
               
3-520
               

               
Cow position:
               
chr18:56434053-56434561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 39
               

               
Conread position:
               
3-521
               

               
Cow position:
               
chr18:52012108-52011590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
107, 113
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chr18:54992567-54993089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 290
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr18:40251562-40251808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
158, 76
               

               
Conread position:
               
4-316
               

               
Cow position:
               
chr18:42959720-42959407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr18:40251092-40251434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
4-433
               

               
Cow position:
               
chr18:49022898-49023327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 112
               

               
Conread position:
               
4-464
               

               
Cow position:
               
chr18:51812380-51811920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr18:42693712-42693234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
394, 403
               

               
Conread position:
               
4-503
               

               
Cow position:
               
chr18:50281842-50282341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
131, 136
               

               
Conread position:
               
4-512
               

               
Cow position:
               
chr18:49032710-49032202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 313
               

               
Conread position:
               
4-512
               

               
Cow position:
               
chr18:50083450-50083958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
4-512
               

               
Cow position:
               
chr18:52447276-52447784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
4-513
               

               
Cow position:
               
chr18:53498477-53498986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
4-515
               

               
Cow position:
               
chr18:50030982-50030469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
159, 54
               

               
Conread position:
               
4-516
               

               
Cow position:
               
chr18:50295356-50295870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
4-518
               

               
Cow position:
               
chr18:50848671-50849185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 136
               

               
Conread position:
               
4-520
               

               
Cow position:
               
chr18:54967956-54968470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
5-398
               

               
Cow position:
               
chr18:51367594-51367201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-459
               

               
Cow position:
               
chr18:50271714-50272167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
130, 141
               

               
Conread position:
               
5-464
               

               
Cow position:
               
chr18:44239758-44240217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
225, 211
               

               
Conread position:
               
5-495
               

               
Cow position:
               
chr18:53636128-53635637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 107
               

               
Conread position:
               
5-495
               

               
Cow position:
               
chr18:56128037-56128528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
12, 235
               

               
Conread position:
               
5-504
               

               
Cow position:
               
chr18:51368602-51368102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 320
               

               
Conread position:
               
5-512
               

               
Cow position:
               
chr18:42791637-42792144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
127, 135
               

               
Conread position:
               
5-512
               

               
Cow position:
               
chr18:49033382-49032874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 56
               

               
Conread position:
               
5-512
               

               
Cow position:
               
chr18:51367762-51367255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
138, 150
               

               
Conread position:
               
5-512
               

               
Cow position:
               
chr18:51400365-51400872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
305, 310
               

               
Conread position:
               
5-514
               

               
Cow position:
               
chr18:40324881-40324372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
5-514
               

               
Cow position:
               
chr18:42675320-42674811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 312
               

               
Conread position:
               
5-514
               

               
Cow position:
               
chr18:50099144-50099655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
5-515
               

               
Cow position:
               
chr18:42960128-42959629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
5-515
               

               
Cow position:
               
chr18:44398439-44397928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 58
               

               
Conread position:
               
5-520
               

               
Cow position:
               
chr18:40075024-40075539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 397
               

               
Conread position:
               
5-520
               

               
Cow position:
               
chr18:50848504-50849019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 135
               

               
Conread position:
               
6-514
               

               
Cow position:
               
chr18:50059621-50059113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 318
               

               
Conread position:
               
6-515
               

               
Cow position:
               
chr18:50022401-50021889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
6-522
               

               
Cow position:
               
chr18:56330185-56329668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
508, 0
               

               
Conread position:
               
7-470
               

               
Cow position:
               
chr18:40324377-40323914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
7-503
               

               
Cow position:
               
chr18:49022733-49023229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 108
               

               
Conread position:
               
7-507
               

               
Cow position:
               
chr18:44253468-44252982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
388, 85
               

               
Conread position:
               
7-508
               

               
Cow position:
               
chr18:40086511-40086012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 302
               

               
Conread position:
               
7-511
               

               
Cow position:
               
chr18:51766079-51765575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
391, 400
               

               
Conread position:
               
7-512
               

               
Cow position:
               
chr18:41198166-41198671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-512
               

               
Cow position:
               
chr18:43023068-43022563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
232, 217
               

               
Conread position:
               
7-512
               

               
Cow position:
               
chr18:53610380-53609875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
7-514
               

               
Cow position:
               
chr18:40306171-40306679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
7-514
               

               
Cow position:
               
chr18:43022648-43022141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
303, 310
               

               
Conread position:
               
7-520
               

               
Cow position:
               
chr18:50848170-50848683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
222, 216
               

               
Conread position:
               
9-370
               

               
Cow position:
               
chr18:44154026-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
303, 49
               

               
Conread position:
               
10-491
               

               
Cow position:
               
chr18:55497616-55497135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
326, 315
               

               
Conread position:
               
10-503
               

               
Cow position:
               
chr18:43120317-43119824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
216, 223
               

               
Conread position:
               
10-504
               

               
Cow position:
               
chr18:50083288-50083782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
373, 382
               

               
Conread position:
               
10-511
               

               
Cow position:
               
chr18:42693874-42693374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
10-512
               

               
Cow position:
               
chr18:42791558-42792060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
294, 303
               

               
Conread position:
               
10-512
               

               
Cow position:
               
chr18:43167966-43168468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 130
               

               
Conread position:
               
10-512
               

               
Cow position:
               
chr18:43175266-43174764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 313
               

               
Conread position:
               
10-512
               

               
Cow position:
               
chr18:52427639-52428141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
469, 458
               

               
Conread position:
               
10-520
               

               
Cow position:
               
chr18:33093100-33092590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 50
               

               
Conread position:
               
10-520
               

               
Cow position:
               
chr18:52432988-52433498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-520
               

               
Cow position:
               
chr18:52446946-52447456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
10-520
               

               
Cow position:
               
chr18:52447198-52447708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
167, 161
               

               
Conread position:
               
12-386
               

               
Cow position:
               
chr18:40086008-40085637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
204, 31
               

               
Conread position:
               
12-468
               

               
Cow position:
               
chr18:55497699-55497242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
12-512
               

               
Cow position:
               
chr18:51368510-51368010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
227, 204
               

               
Conread position:
               
13-419
               

               
Cow position:
               
chr18:22634817-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
368, 375
               

               
Conread position:
               
13-512
               

               
Cow position:
               
chr18:51400289-51400788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 97
               

               
Conread position:
               
13-512
               

               
Cow position:
               
chr18:51813043-51812544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 49
               

               
Conread position:
               
13-513
               

               
Cow position:
               
chr18:56494021-56494521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
488, 480
               

               
Conread position:
               
13-514
               

               
Cow position:
               
chr18:56329590-56329089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
13-520
               

               
Cow position:
               
chr18:53586654-53586147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 133
               

               
Conread position:
               
15-520
               

               
Cow position:
               
chr18:53559685-53560190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-512
               

               
Cow position:
               
chr18:43120395-43119899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
210, 215
               

               
Conread position:
               
17-470
               

               
Cow position:
               
chr18:51874155-51874606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
209, 43
               

               
Conread position:
               
18-421
               

               
Cow position:
               
chr18:56267530-56267127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
19-476
               

               
Cow position:
               
chr18:49022243-49022698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
241, 235
               

               
Conread position:
               
19-486
               

               
Cow position:
               
chr18:53610536-53610069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
19-503
               

               
Cow position:
               
chr18:41197506-41197990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
19-514
               

               
Cow position:
               
chr18:43175593-43175098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 121
               

               
Conread position:
               
19-520
               

               
Cow position:
               
chr18:49022495-49022994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 84
               

               
Conread position:
               
19-520
               

               
Cow position:
               
chr18:54966882-54967383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 352
               

               
Conread position:
               
21-491
               

               
Cow position:
               
chr18:56391414-56390944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-520
               

               
Cow position:
               
chr18:50281691-50282191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
27-304
               

               
Cow position:
               
chr18:55075111-55075389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
116, 120
               

               
Conread position:
               
28-512
               

               
Cow position:
               
chr18:50271485-50271969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
118, 113
               

               
Conread position:
               
28-514
               

               
Cow position:
               
chr18:54966807-54967293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
29-503
               

               
Cow position:
               
chr18:1417859-1418333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
316, 310
               

               
Conread position:
               
29-515
               

               
Cow position:
               
chr18:42790905-42791391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 196
               

               
Conread position:
               
36-512
               

               
Cow position:
               
chr18:49022594-49023070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
83, 101
               

               
Conread position:
               
37-512
               

               
Cow position:
               
chr18:51789776-51789301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
39-520
               

               
Cow position:
               
chr18:50271583-50272061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
56-520
               

               
Cow position:
               
chr18:55008445-55008907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 108
               

               
Conread position:
               
60-344
               

               
Cow position:
               
chr18:56433357-56433640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 90
               

               
Conread position:
               
60-464
               

               
Cow position:
               
chr18:41949376-41948972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
255, 246
               

               
Conread position:
               
60-494
               

               
Cow position:
               
chr18:50295244-50295678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
154, 170
               

               
Conread position:
               
60-503
               

               
Cow position:
               
chr18:50281646-50282089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
60-511
               

               
Cow position:
               
chr18:14453964-14453513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
267, 275
               

               
Conread position:
               
60-512
               

               
Cow position:
               
chr18:33065050-33064598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
60-520
               

               
Cow position:
               
chr18:55008365-55008823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 188
               

               
Conread position:
               
61-503
               

               
Cow position:
               
chr18:50031009-50030565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
157, 71
               

               
Conread position:
               
61-503
               

               
Cow position:
               
chr18:52012468-52012028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
247, 21
               

               
Conread position:
               
61-504
               

               
Cow position:
               
chr18:42837963-42837520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
61-512
               

               
Cow position:
               
chr18:44184913-44184462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
178, 161
               

               
Conread position:
               
61-512
               

               
Cow position:
               
chr18:50048914-50048463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
159, 150
               

               
Conread position:
               
61-512
               

               
Cow position:
               
chr18:50049082-50048631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
153, 170
               

               
Conread position:
               
61-514
               

               
Cow position:
               
chr18:1417975-1418428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 194
               

               
Conread position:
               
61-514
               

               
Cow position:
               
chr18:43168101-43168554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 79
               

               
Conread position:
               
61-514
               

               
Cow position:
               
chr18:49021624-49022077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
61-516
               

               
Cow position:
               
chr18:56433773-56434221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
121, 151
               

               
Conread position:
               
61-520
               

               
Cow position:
               
chr18:50022262-50021800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
192, 250
               

               
Conread position:
               
61-520
               

               
Cow position:
               
chr18:53587110-53586651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 169
               

               
Conread position:
               
61-520
               

               
Cow position:
               
chr18:54979449-54979908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
339, 346
               

               
Conread position:
               
61-520
               

               
Cow position:
               
chr18:54992709-54993168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
62-466
               

               
Cow position:
               
chr18:50098949-50099353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
62-504
               

               
Cow position:
               
chr18:14453314-14452872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
64-465
               

               
Cow position:
               
chr18:50049251-50048846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 171
               

               
Conread position:
               
64-512
               

               
Cow position:
               
chr18:42837876-42837428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 343
               

               
Conread position:
               
64-514
               

               
Cow position:
               
chr18:44253995-44253549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
246, 97
               

               
Conread position:
               
65-512
               

               
Cow position:
               
chr18:50059646-50059199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
70, 75
               

               
Conread position:
               
66-512
               

               
Cow position:
               
chr18:42675343-42674897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 403
               

               
Conread position:
               
68-512
               

               
Cow position:
               
chr18:42985580-42985136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 232
               

               
Conread position:
               
68-514
               

               
Cow position:
               
chr18:42827384-42827830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
320, 339
               

               
Conread position:
               
69-504
               

               
Cow position:
               
chr18:43023090-43022655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
242, 255
               

               
Conread position:
               
69-504
               

               
Cow position:
               
chr18:50059306-50058871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
242, 247
               

               
Conread position:
               
69-512
               

               
Cow position:
               
chr18:44240242-44240685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
241, 248
               

               
Conread position:
               
69-512
               

               
Cow position:
               
chr18:50099712-50100155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
145, 161
               

               
Conread position:
               
69-514
               

               
Cow position:
               
chr18:43175291-43174846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 46
               

               
Conread position:
               
70-477
               

               
Cow position:
               
chr18:51367613-51367206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
70-512
               

               
Cow position:
               
chr18:43167774-43168216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
70-512
               

               
Cow position:
               
chr18:51789575-51789133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
234, 250
               

               
Conread position:
               
70-514
               

               
Cow position:
               
chr18:40074921-40075365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 67
               

               
Conread position:
               
70-514
               

               
Cow position:
               
chr18:55017778-55018222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 337
               

               
Conread position:
               
70-520
               

               
Cow position:
               
chr18:49022712-49023162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
123, 127
               

               
Conread position:
               
71-504
               

               
Cow position:
               
chr18:44239740-44240173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
244, 229
               

               
Conread position:
               
71-512
               

               
Cow position:
               
chr18:14454037-14453596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
227, 235
               

               
Conread position:
               
72-504
               

               
Cow position:
               
chr18:44154470-44154035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 238
               

               
Conread position:
               
72-512
               

               
Cow position:
               
chr18:42960315-42959875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
75-464
               

               
Cow position:
               
chr18:43048741-43048351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
124, 120
               

               
Conread position:
               
75-520
               

               
Cow position:
               
chr18:50848322-50848767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
76-463
               

               
Cow position:
               
chr18:56433704-56434093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
186, 220
               

               
Conread position:
               
78-519
               

               
Cow position:
               
chr18:43167614-43168056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
103, 93
               

               
Conread position:
               
80-463
               

               
Cow position:
               
chr18:53525684-53526067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 237
               

               
Conread position:
               
80-504
               

               
Cow position:
               
chr18:42744725-42744301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
80-514
               

               
Cow position:
               
chr18:56247737-56247311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
230, 237
               

               
Conread position:
               
80-519
               

               
Cow position:
               
chr18:53509230-53509669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 237
               

               
Conread position:
               
81-515
               

               
Cow position:
               
chr18:50848079-50848510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
81-520
               

               
Cow position:
               
chr18:53497965-53498407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
223, 50
               

               
Conread position:
               
82-393
               

               
Cow position:
               
chr18:56248165-56247855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
268, 0
               

               
Conread position:
               
82-514
               

               
Cow position:
               
chr18:55067116-55066684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
83-520
               

               
Cow position:
               
chr18:56493839-56494276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
84-512
               

               
Cow position:
               
chr18:50245989-50246417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
84-516
               

               
Cow position:
               
chr18:33065110-33064678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
93-520
               

               
Cow position:
               
chr18:53587162-53586735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
97-495
               

               
Cow position:
               
chr18:53610542-53610144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
97-512
               

               
Cow position:
               
chr18:41197500-41197915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
104-499
               

               
Cow position:
               
chr18:56267528-56267133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
104-516
               

               
Cow position:
               
chr18:53571827-53572226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
105-515
               

               
Cow position:
               
chr18:40074875-40075282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
106-521
               

               
Cow position:
               
chr18:50022385-50021966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
111-383
               

               
Cow position:
               
chr18:40251115-40251377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
113-512
               

               
Cow position:
               
chr18:50098916-50099315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 27
               

               
Conread position:
               
113-512
               

               
Cow position:
               
chr18:51752226-51751827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
105, 127
               

               
Conread position:
               
113-512
               

               
Cow position:
               
chr18:51969286-51969679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
199, 30
               

               
Conread position:
               
114-356
               

               
Cow position:
               
chr18:43053433-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
114-413
               

               
Cow position:
               
chr18:55075114-55075414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
164, 234
               

               
Conread position:
               
114-514
               

               
Cow position:
               
chr18:50083308-50083708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 26
               

               
Conread position:
               
114-524
               

               
Cow position:
               
chr18:42724562-42724151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
161, 156
               

               
Conread position:
               
115-512
               

               
Cow position:
               
chr18:51368576-51368178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
32, 354
               

               
Conread position:
               
115-512
               

               
Cow position:
               
chr18:56316076-56316473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
206, 195
               

               
Conread position:
               
116-477
               

               
Cow position:
               
chr18:56248210-56247855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
281, 32
               

               
Conread position:
               
118-520
               

               
Cow position:
               
chr18:42694103-42693700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 290
               

               
Conread position:
               
121-467
               

               
Cow position:
               
chr18:50059674-50059328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
183, 195
               

               
Conread position:
               
121-497
               

               
Cow position:
               
chr18:53555173-53554798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
123-519
               

               
Cow position:
               
chr18:42724637-42724240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
236, 231
               

               
Conread position:
               
134-465
               

               
Cow position:
               
chr18:50245956-50246286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
138-515
               

               
Cow position:
               
chr18:42960333-42959956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
146-432
               

               
Cow position:
               
chr18:51873674-51873960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
151-515
               

               
Cow position:
               
chr18:42827383-42827747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
152-520
               

               
Cow position:
               
chr18:22634538-22634904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
159-520
               

               
Cow position:
               
chr18:54966854-54967215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
161-519
               

               
Cow position:
               
chr18:43048739-43048380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
149, 156
               

               
Conread position:
               
166-503
               

               
Cow position:
               
chr18:56128115-56128452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
166-512
               

               
Cow position:
               
chr18:55523302-55523648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
166-520
               

               
Cow position:
               
chr18:53509232-53509586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
48, 58
               

               
Conread position:
               
166-520
               

               
Cow position:
               
chr18:53525686-53526040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
48, 58
               

               
Conread position:
               
166-520
               

               
Cow position:
               
chr18:55067116-55066762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
137, 148
               

               
Conread position:
               
170-514
               

               
Cow position:
               
chr18:14453290-14452946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 64
               

               
Conread position:
               
176-514
               

               
Cow position:
               
chr18:41197496-41197833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
128, 10
               

               
Conread position:
               
180-503
               

               
Cow position:
               
chr18:50271469-50271792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
112, 124
               

               
Conread position:
               
181-512
               

               
Cow position:
               
chr18:50083291-50083622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
94, 90
               

               
Conread position:
               
181-514
               

               
Cow position:
               
chr18:42744708-42744375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
186-514
               

               
Cow position:
               
chr18:42837922-42837594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
188-514
               

               
Cow position:
               
chr18:53636112-53635786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
196-414
               

               
Cow position:
               
chr18:53572352-53572570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
196-467
               

               
Cow position:
               
chr18:55075112-55075384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
211-512
               

               
Cow position:
               
chr18:50059668-50059367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
236-494
               

               
Cow position:
               
chr18:55497642-55497384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
238-504
               

               
Cow position:
               
chr18:41949366-41949100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
238-520
               

               
Cow position:
               
chr18:40074921-40075203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
239-514
               

               
Cow position:
               
chr18:14454037-14453762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
239-520
               

               
Cow position:
               
chr18:54966850-54967131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
164, 168
               

               
Conread position:
               
248-511
               

               
Cow position:
               
chr18:53525684-53525947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
249-514
               

               
Cow position:
               
chr18:14453295-14453030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
249-515
               

               
Cow position:
               
chr18:55523301-55523567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
250-503
               

               
Cow position:
               
chr18:56248165-56247912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 39
               

               
Conread position:
               
265-514
               

               
Cow position:
               
chr18:49033373-49033124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
271-519
               

               
Cow position:
               
chr18:55075103-55075352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
274-520
               

               
Cow position:
               
chr18:53636110-53635864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
280-512
               

               
Cow position:
               
chr18:43053435-43053203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 37
               
Show alignments to all cow chromosomes.