Cow genome map

Conread name: rpigcb_17669.y1

Conread position: 1-175
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-252
Cow position:
Alignm length: 252
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-302
Cow position:
Alignm length: 302
Alignm identity: 191
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-368
Cow position:
Alignm length: 369
Alignm identity: 226
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 347, 0

Conread position: 1-421
Cow position:
Alignm length: 421
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-449
Cow position:
Alignm length: 450
Alignm identity: 273
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 68

Conread position: 1-464
Cow position:
Alignm length: 466
Alignm identity: 291
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 69, 51

Conread position: 1-466
Cow position:
Alignm length: 467
Alignm identity: 279
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 313, 322

Conread position: 1-466
Cow position:
Alignm length: 468
Alignm identity: 285
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 61

Conread position: 1-467
Cow position:
Alignm length: 469
Alignm identity: 292
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 298, 77

Conread position: 1-470
Cow position:
Alignm length: 472
Alignm identity: 286
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 61

Conread position: 1-484
Cow position:
Alignm length: 487
Alignm identity: 305
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 108, 114

Conread position: 1-494
Cow position:
Alignm length: 497
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 62

Conread position: 1-495
Cow position:
Alignm length: 496
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 456, 463

Conread position: 1-503
Cow position:
Alignm length: 506
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 114

Conread position: 1-503
Cow position:
Alignm length: 504
Alignm identity: 309
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 314, 302

Conread position: 1-507
Cow position:
Alignm length: 509
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 131

Conread position: 1-512
Cow position:
Alignm length: 514
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 314

Conread position: 1-512
Cow position:
Alignm length: 515
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 61

Conread position: 1-512
Cow position:
Alignm length: 514
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 224

Conread position: 1-512
Cow position:
Alignm length: 514
Alignm identity: 311
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 177, 188

Conread position: 1-512
Cow position:
Alignm length: 514
Alignm identity: 321
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 136, 91

Conread position: 1-512
Cow position:
Alignm length: 514
Alignm identity: 318
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 64, 41

Conread position: 1-512
Cow position:
Alignm length: 515
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 59

Conread position: 1-512
Cow position:
Alignm length: 512
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-512
Cow position:
Alignm length: 514
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 433, 450

Conread position: 1-512
Cow position:
Alignm length: 512
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-512
Cow position:
Alignm length: 515
Alignm identity: 314
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 64

Conread position: 1-514
Cow position:
Alignm length: 518
Alignm identity: 322
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 54

Conread position: 1-514
Cow position:
Alignm length: 517
Alignm identity: 313
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 54, 61

Conread position: 1-514
Cow position:
Alignm length: 518
Alignm identity: 320
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 54, 33

Conread position: 1-514
Cow position:
Alignm length: 516
Alignm identity: 312
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 229, 218

Conread position: 1-514
Cow position:
Alignm length: 519
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 47

Conread position: 1-514
Cow position:
Alignm length: 516
Alignm identity: 308
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 41

Conread position: 1-514
Cow position:
Alignm length: 517
Alignm identity: 312
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 64, 47

Conread position: 1-514
Cow position:
Alignm length: 515
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 59

Conread position: 1-515
Cow position:
Alignm length: 517
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 166

Conread position: 1-516
Cow position:
Alignm length: 520
Alignm identity: 315
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 62, 49

Conread position: 1-520
Cow position:
Alignm length: 521
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 316

Conread position: 1-520
Cow position:
Alignm length: 521
Alignm identity: 317
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 230, 215

Conread position: 1-520
Cow position:
Alignm length: 523
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 319

Conread position: 2-398
Cow position:
Alignm length: 399
Alignm identity: 248
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 273, 268

Conread position: 2-512
Cow position:
Alignm length: 513
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 227

Conread position: 2-522
Cow position:
Alignm length: 523
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 228

Conread position: 3-257
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 175, 184

Conread position: 3-343
Cow position:
Alignm length: 341
Alignm identity: 213
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 3-380
Cow position:
Alignm length: 379
Alignm identity: 240
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 59, 45

Conread position: 3-467
Cow position:
Alignm length: 465
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-467
Cow position:
Alignm length: 467
Alignm identity: 299
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 51, 59

Conread position: 3-503
Cow position:
Alignm length: 503
Alignm identity: 311
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 52, 59

Conread position: 3-512
Cow position:
Alignm length: 513
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 47

Conread position: 3-512
Cow position:
Alignm length: 511
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 314

Conread position: 3-514
Cow position:
Alignm length: 516
Alignm identity: 313
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 59

Conread position: 3-520
Cow position:
Alignm length: 520
Alignm identity: 311
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 106, 113

Conread position: 4-341
Cow position:
Alignm length: 340
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 261, 38

Conread position: 4-512
Cow position:
Alignm length: 510
Alignm identity: 308
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 58

Conread position: 4-514
Cow position:
Alignm length: 512
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 433, 426

Conread position: 4-514
Cow position:
Alignm length: 512
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 106

Conread position: 5-467
Cow position:
Alignm length: 466
Alignm identity: 292
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 49, 66

Conread position: 6-383
Cow position:
Alignm length: 381
Alignm identity: 248
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 53

Conread position: 6-512
Cow position:
Alignm length: 508
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 56

Conread position: 6-514
Cow position:
Alignm length: 514
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 54

Conread position: 7-514
Cow position:
Alignm length: 509
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 243

Conread position: 9-521
Cow position:
Alignm length: 515
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 10-514
Cow position:
Alignm length: 506
Alignm identity: 315
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 106, 100

Conread position: 28-431
Cow position:
Alignm length: 405
Alignm identity: 252
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 20

Conread position: 65-512
Cow position:
Alignm length: 449
Alignm identity: 271
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 245, 259

Conread position: 68-512
Cow position:
Alignm length: 445
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 68-527
Cow position:
Alignm length: 462
Alignm identity: 280
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 247, 141

Conread position: 70-479
Cow position:
Alignm length: 412
Alignm identity: 254
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 156, 170

Conread position: 70-504
Cow position:
Alignm length: 437
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 155

Conread position: 81-512
Cow position:
Alignm length: 435
Alignm identity: 268
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 234, 213

Conread position: 81-520
Cow position:
Alignm length: 442
Alignm identity: 257
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 11

Conread position: 83-514
Cow position:
Alignm length: 432
Alignm identity: 267
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 106-521
Cow position:
Alignm length: 417
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 204, 45

Conread position: 114-512
Cow position:
Alignm length: 401
Alignm identity: 256
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 196, 58

Conread position: 114-515
Cow position:
Alignm length: 403
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 201

Conread position: 115-512
Cow position:
Alignm length: 399
Alignm identity: 254
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 20, 25

Conread position: 238-514
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 243, 231

Conread position: 264-520
Cow position:
Alignm length: 258
Alignm identity: 168
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 53

Show alignments to all cow chromosomes.