Cow genome map

Conread name: rpigcb_17669.y1

Conread position: 1-299
Cow position: chr23:25724048-25723750 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 72

Conread position: 1-343
Cow position: chr23:25660398-25660740 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 219
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 60, 50

Conread position: 1-382
Cow position: chr23:24654112-24654487 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 242
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 58

Conread position: 1-422
Cow position: chr23:24626303-24626724 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 61

Conread position: 1-470
Cow position: chr23:24522654-24522188 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 297
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 82, 44

Conread position: 1-503
Cow position: chr23:24535966-24535464 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 307
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 1-507
Cow position: chr23:25660230-25660736 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 156

Conread position: 1-512
Cow position: chr23:24547251-24546740 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 61

Conread position: 1-512
Cow position: chr23:25626109-25626617 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 316
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 387, 405

Conread position: 1-514
Cow position: chr23:24547167-24546654 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 312

Conread position: 1-514
Cow position: chr23:24560643-24560130 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-515
Cow position: chr23:24560811-24560297 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 80

Conread position: 1-515
Cow position: chr23:25660146-25660660 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 453, 466

Conread position: 1-516
Cow position: chr23:25626277-25626789 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 248

Conread position: 1-530
Cow position: chr23:24639547-24640074 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 286

Conread position: 2-512
Cow position: chr23:24639464-24639974 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 137

Conread position: 3-308
Cow position: chr23:24639801-24640106 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 34

Conread position: 3-431
Cow position: chr23:25626612-25627040 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 272
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 312, 306

Conread position: 3-496
Cow position: chr23:25698575-25698082 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 306
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 252, 267

Conread position: 3-514
Cow position: chr23:24522736-24522228 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 321
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 68, 51

Conread position: 4-514
Cow position: chr23:25626028-25626538 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 311
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 48, 62

Conread position: 5-387
Cow position: chr23:24522569-24522187 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 243
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 47, 57

Conread position: 5-512
Cow position: chr23:24536046-24535539 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 312
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 305, 312

Conread position: 5-512
Cow position: chr23:25626365-25626869 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 57

Conread position: 6-323
Cow position: chr23:24522484-24522167 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 6-496
Cow position: chr23:25626534-25627021 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 48

Conread position: 6-503
Cow position: chr23:24560722-24560225 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 311

Conread position: 6-512
Cow position: chr23:24560890-24560384 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-514
Cow position: chr23:24547330-24546822 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 110

Conread position: 7-533
Cow position: chr23:24522814-24522295 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 328
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 222, 27

Conread position: 9-516
Cow position: chr23:24639387-24639894 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 314

Conread position: 16-338
Cow position: chr23:24654043-24654365 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 196
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 16-512
Cow position: chr23:24639226-24639722 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 305
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 46

Conread position: 17-392
Cow position: chr23:25724116-25723741 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 61-514
Cow position: chr23:24626279-24626732 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 18

Conread position: 68-514
Cow position: chr23:25626008-25626454 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 272
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 247, 241

Conread position: 114-503
Cow position: chr23:25724103-25723714 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 249
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 23, 7

Conread position: 114-511
Cow position: chr23:25626558-25626952 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 260
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 125, 26

Conread position: 114-514
Cow position: chr23:24536021-24535621 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 246
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 114-514
Cow position: chr23:25698632-25698232 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 263
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 14, 20

Conread position: 115-392
Cow position: chr23:24654058-24654335 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 153-503
Cow position: chr23:25698677-25698327 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 328, 320

Conread position: 168-512
Cow position: chr23:25660145-25660489 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 249, 234

Conread position: 184-504
Cow position: chr23:24654043-24654363 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 205
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 126, 131

Conread position: 196-520
Cow position: chr23:25724105-25723781 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 22, 9

Conread position: 235-512
Cow position: chr23:24560913-24560636 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 245-497
Cow position: chr23:25660138-25660389 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 62

Conread position: 268-514
Cow position: chr23:24654043-24654289 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 274-522
Cow position: chr23:25724111-25723862 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 28, 15

Conread position: 329-512
Cow position: chr23:25660138-25660321 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.