Cow genome map

Conread name: rpigcb_17669.y1

Conread position: 1-382
Cow position: chr7:8325735-8326116 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 238
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 145, 152

Conread position: 1-467
Cow position: chr7:8277926-8278392 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 280
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 70

Conread position: 1-470
Cow position: chr7:8277758-8278227 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 280
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 70

Conread position: 1-470
Cow position: chr7:8278010-8278477 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 284
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 51

Conread position: 1-473
Cow position: chr7:18390324-18390796 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 59

Conread position: 1-476
Cow position: chr7:1015017-1015494 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 222

Conread position: 1-503
Cow position: chr7:1014933-1015435 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 306

Conread position: 1-503
Cow position: chr7:1439464-1439967 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 305
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 41

Conread position: 1-503
Cow position: chr7:18390240-18390742 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 306

Conread position: 1-504
Cow position: chr7:11600941-11600438 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 308
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 49

Conread position: 1-504
Cow position: chr7:42878778-42878275 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 49

Conread position: 1-512
Cow position: chr7:3179775-3180286 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 308

Conread position: 1-512
Cow position: chr7:3179943-3180454 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 61

Conread position: 1-512
Cow position: chr7:3180027-3180538 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 59

Conread position: 1-512
Cow position: chr7:3180363-3180873 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 40

Conread position: 1-512
Cow position: chr7:11601109-11600598 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 316
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 150, 133

Conread position: 1-512
Cow position: chr7:42878946-42878435 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 139

Conread position: 1-512
Cow position: chr7:42879114-42878603 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 61

Conread position: 1-512
Cow position: chr7:42879198-42878687 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 316

Conread position: 1-514
Cow position: chr7:1014765-1015278 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 306

Conread position: 1-514
Cow position: chr7:1014849-1015362 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 33

Conread position: 1-514
Cow position: chr7:3179859-3180372 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-514
Cow position: chr7:3180195-3180708 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 308

Conread position: 1-514
Cow position: chr7:3180279-3180792 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 224

Conread position: 1-514
Cow position: chr7:42879030-42878517 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 139

Conread position: 1-515
Cow position: chr7:42878862-42878348 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 109

Conread position: 1-520
Cow position: chr7:1014267-1014780 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 303
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 68

Conread position: 1-520
Cow position: chr7:1439719-1440235 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 319
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 301, 41

Conread position: 1-530
Cow position: chr7:8325567-8326094 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 321
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 49, 70

Conread position: 3-464
Cow position: chr7:11601023-11600562 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 275
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 59

Conread position: 4-482
Cow position: chr7:12293345-12293823 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 281
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 222, 236

Conread position: 5-467
Cow position: chr7:8277342-8277804 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 278
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 42, 66

Conread position: 7-380
Cow position: chr7:1439891-1440263 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 235
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 64

Conread position: 7-512
Cow position: chr7:18390162-18390667 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 108

Conread position: 10-470
Cow position: chr7:8277599-8278059 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 298
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 101, 106

Conread position: 15-512
Cow position: chr7:3179705-3180202 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 207

Conread position: 21-512
Cow position: chr7:1014701-1015192 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 48

Conread position: 61-512
Cow position: chr7:42879222-42878771 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 81

Conread position: 61-514
Cow position: chr7:11601133-11600680 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 277
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 324, 345

Conread position: 64-512
Cow position: chr7:42879303-42878855 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 76

Conread position: 67-514
Cow position: chr7:18389970-18390417 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 271
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 163, 152

Conread position: 69-511
Cow position: chr7:1439448-1439890 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 277
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 71

Conread position: 72-515
Cow position: chr7:1014668-1015111 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 272
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 203, 199

Conread position: 81-466
Cow position: chr7:8325563-8325948 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 245
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 35

Conread position: 114-464
Cow position: chr7:1439914-1440264 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 221
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 199, 57

Conread position: 121-520
Cow position: chr7:11601157-11600758 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 240
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 181-520
Cow position: chr7:18390000-18390339 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 212
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 48

Conread position: 185-512
Cow position: chr7:1014283-1014610 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 205
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 130, 125

Conread position: 185-512
Cow position: chr7:11601177-11600850 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 199
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 199-514
Cow position: chr7:3179721-3180036 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 283-515
Cow position: chr7:3179721-3179953 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.